Experiment set5IT060 for Agrobacterium fabrum C58

Compare to:

R2A with Phosphomycin disodium salt 50 mM

200 most important genes:

  gene name fitness t score description  
Atu0169 -5.8 -11.6 hypothetical protein conserved
Atu2710 -5.7 -8.8 hypothetical protein compare
Atu0972 -3.8 -6.6 lipA protein compare
Atu0422 -3.6 -3.4 ABC transporter, membrane spanning protein compare
Atu3469 -3.2 -3.1 phosphoglyceromutase compare
Atu1688 -3.0 -5.0 indole-3-glycerol-phosphate synthase compare
Atu4576 -2.8 -11.6 ROK family transcriptional regulator compare
Atu1687 -2.2 -6.7 anthranilate phosphoribosyltransferase compare
Atu6098 -2.2 -1.3 transcriptional regulator, HTH family compare
Atu2289 -2.2 -12.1 anthranilate synthase component I and II compare
Atu0017 -2.1 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3739 -2.1 -3.5 phosphoglycerate kinase compare
Atu0086 -1.9 -1.5 ribosome-binding factor A compare
Atu4702 -1.9 -9.7 GntR family transcriptional regulator compare
Atu0399 -1.7 -5.3 dihydroorotase compare
Atu4317 -1.7 -3.4 TetR family transcriptional regulator compare
Atu1774 -1.6 -9.1 ABC transporter, substrate binding protein (peptide) compare
Atu1307 -1.6 -4.4 dihydroorotase compare
Atu0181 -1.6 -4.8 hypothetical protein compare
Atu0298 -1.6 -7.1 orotidine 5 compare
Atu0400 -1.6 -4.2 orotate phosphoribosyltransferase compare
Atu0486 -1.5 -5.5 dihydroorotate dehydrogenase compare
Atu1028 -1.5 -2.4 hypothetical protein compare
Atu0190 -1.5 -7.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0876 -1.4 -2.9 superoxide dismutase compare
Atu0188 -1.4 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu3712 -1.4 -2.4 hypothetical protein compare
Atu1686 -1.4 -8.2 peptidyl-prolyl cis-trans isomerse D compare
Atu0176 -1.4 -8.9 ABC transporter, nucleotide binding/ATPase protein (phosphonate) conserved
Atu1308 -1.4 -5.6 aspartate carbamoyl transferase catalytic subunit compare
Atu0039 -1.3 -1.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu0180 -1.3 -6.1 hypothetical protein conserved
Atu0103 -1.3 -7.2 penicillin-binding protein compare
Atu0346 -1.2 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3750 -1.2 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu0031 -1.2 -1.8 PTS system, IIA component compare
Atu0434 -1.2 -3.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -1.2 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0598 -1.2 -7.7 phosphogluconate dehydratase compare
Atu0178 -1.2 -8.7 hypothetical protein conserved
Atu1163 -1.2 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0177 -1.2 -6.8 ABC transporter, nucleotide binding/ATPase protein (phosphonate) conserved
Atu0025 -1.2 -2.2 hypothetical protein compare
Atu0179 -1.1 -6.3 hypothetical protein conserved
Atu1844 -1.1 -2.9 Phosphoribosylformylglycinamidine synthetase compare
Atu0361 -1.1 -1.7 transcriptional regulator compare
Atu4166 -1.1 -2.2 UDP-glucose 4-epimerase compare
Atu4773 -1.0 -1.8 two component response regulator compare
Atu3486 -1.0 -1.2 DeoR family transcriptional regulator compare
Atu1566 -1.0 -1.4 hypothetical protein compare
Atu0943 -0.9 -2.0 hypothetical protein compare
Atu1891 -0.9 -2.6 cobalamin biosynthesis protein compare
Atu3121 -0.9 -1.1 cold shock protein compare
Atu2113 -0.9 -2.1 N-acetylmuramoyl-L-alanine amidase compare
Atu4896 -0.9 -1.6 acetyltransferase compare
Atu3727 -0.9 -3.7 hypothetical protein compare
Atu2684 -0.9 -0.8 hypothetical protein compare
Atu3754 -0.9 -2.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2472 -0.9 -1.1 hypothetical protein compare
Atu4890 -0.9 -1.7 IS426 transposase compare
Atu2442 -0.9 -2.7 hypothetical protein compare
Atu2728 -0.8 -3.2 beta (1-->2) glucan export ATP-binding protein compare
Atu4471 -0.8 -6.0 ABC transporter substrate-binding protein compare
Atu0421 -0.8 -1.2 ABC transporter, membrane spanning protein compare
Atu0953 -0.8 -1.0 hypothetical protein compare
Atu5088 -0.8 -1.3 hypothetical protein compare
Atu3012 -0.8 -1.0 hypothetical protein compare
Atu0269 -0.8 -3.3 exodeoxyribonuclease VII large subunit compare
Atu6189 -0.8 -1.0 protein secretion chaperone compare
Atu1021 -0.8 -2.7 outer membrane protein compare
Atu2800 -0.8 -1.3 precorrin-3B C17-methyltransferase compare
Atu4873 -0.8 -3.6 TetR family transcriptional regulator compare
Atu4617 -0.8 -5.3 dTDP-D-glucose-4,6-dehydratase compare
Atu2807 -0.8 -3.6 cob(I)alamin adenosyltransferase compare
Atu0886 -0.8 -1.5 hypothetical protein compare
Atu1739 -0.8 -3.0 permease compare
Atu1446 -0.7 -1.6 two component response regulator compare
Atu1189 -0.7 -1.3 hypothetical protein compare
Atu1845 -0.7 -3.2 phosphoribosylformylglycinamidine synthase I compare
Atu2464 -0.7 -1.7 formyltetrahydrofolate deformylase compare
Atu0755 -0.7 -2.4 hypothetical protein compare
Atu1149 -0.7 -1.4 adenylate cyclase compare
Atu4470 -0.7 -4.1 iron ABC transporter ATPase compare
Atu1364 -0.7 -3.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8054 -0.7 -0.6 hypothetical protein compare
Atu2057 -0.7 -1.4 DNA helicase II compare
Atu2650 -0.7 -5.0 glycerol-3-phosphate dehydrogenase compare
Atu0977 -0.7 -2.2 serine protease DO-like protease compare
Atu2793 -0.7 -3.1 cobyrinic acid a,c-diamide synthase compare
Atu0115 -0.7 -0.9 hypothetical protein compare
Atu4075 -0.7 -3.2 glycogen synthase compare
Atu5010 -0.7 -2.2 hypothetical protein compare
Atu1447 -0.7 -2.5 two component sensor kinase compare
Atu2808 -0.7 -3.1 cobyric acid synthase compare
Atu4882 -0.7 -1.8 hypothetical protein compare
Atu3014 -0.7 -1.4 hypothetical protein compare
Atu1252 -0.7 -2.3 hypothetical protein compare
Atu0971 -0.7 -2.7 two component sensor kinase compare
Atu2125 -0.7 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1077 -0.6 -2.2 DNA repair protein compare
Atu1850 -0.6 -2.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3353 -0.6 -4.2 mannose-1-phosphate guanylyltransferase compare
Atu4223 -0.6 -1.4 sarcosine oxidase delta subunit compare
Atu3730 -0.6 -1.1 hypothetical protein compare
Atu1542 -0.6 -3.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4108 -0.6 -4.0 ribonuclease D compare
Atu0647 -0.6 -3.4 phosphoribosylamine--glycine ligase compare
Atu1075 -0.6 -2.8 amidophosphoribosyltransferase compare
Atu8202 -0.6 -2.6 hypothetical protein compare
Atu3183 -0.6 -0.7 hypothetical protein compare
Atu2804 -0.6 -4.3 cobaltochelatase subunit compare
Atu2802 -0.6 -2.8 precorrin-8X methylmutase compare
Atu3634 -0.6 -2.5 penicillin-binding protein dacf precursor compare
Atu4892 -0.6 -4.4 hypothetical protein compare
Atu2796 -0.6 -3.2 precorrin-4 C11-methyltransferase compare
Atu3026 -0.6 -2.3 short chain dehydrogenase compare
Atu1614 -0.6 -3.4 phosphoglycolate phosphatase compare
Atu1902 -0.6 -2.8 transketolase compare
Atu8118 -0.6 -2.9 putative universal stress protein compare
Atu2344 -0.6 -1.6 lactoylglutathione lyase compare
Atu2620 -0.6 -1.0 hypothetical protein compare
Atu0331 -0.6 -1.7 sigma-54 modulation protein compare
Atu4615 -0.6 -3.9 glucose-1-phosphate thymidylyltransferase compare
Atu4613 -0.6 -4.8 glycosyltransferase compare
Atu4346 -0.6 -2.6 hypothetical protein compare
Atu0142 -0.6 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu1124 -0.6 -2.1 hypothetical protein compare
Atu0170 -0.6 -1.7 hypothetical protein compare
Atu1140 -0.6 -2.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4792 -0.6 -1.2 hypothetical protein compare
Atu4468 -0.6 -3.6 iron transport ABC transporter permease compare
Atu0093 -0.6 -2.1 Recombination protein compare
Atu4897 -0.6 -1.0 hypothetical protein compare
Atu3706 -0.6 -4.1 D-3-phosphoglycerate dehydrogenase compare
Atu3032 -0.6 -1.6 hypothetical protein compare
Atu2193 -0.6 -0.7 hypothetical protein compare
Atu2239 -0.6 -1.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2809 -0.6 -3.6 cobalamin biosynthesis protein compare
Atu8191 -0.6 -1.4 hypothetical protein compare
Atu3126 -0.6 -1.5 hypothetical protein compare
Atu1694 -0.6 -1.5 hypothetical protein compare
Atu3001 -0.5 -1.4 hypothetical protein compare
Atu2798 -0.5 -1.8 precorrin-6y methyltransferase compare
Atu1177 -0.5 -2.7 hypothetical protein compare
Atu0973 -0.5 -2.6 cycH protein compare
Atu2640 -0.5 -2.3 hypothetical protein compare
Atu4893 -0.5 -2.9 hypothetical protein compare
Atu0435 -0.5 -1.2 tRNA-Gly compare
Atu4887 -0.5 -2.4 hypothetical protein compare
Atu1588 -0.5 -3.6 homoserine dehydrogenase compare
Atu1203 -0.5 -1.1 hypothetical protein compare
Atu4743 -0.5 -2.5 LacI family transcriptional regulator compare
Atu2475 -0.5 -2.2 ABC transporter, membrane spanning protein compare
Atu4878 -0.5 -1.9 hypothetical protein compare
Atu1646 -0.5 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4875 -0.5 -2.9 hypothetical protein compare
Atu2821 -0.5 -2.8 transcriptional regulator, GntR family compare
Atu3481 -0.5 -2.7 enoyl-CoA hydratase compare
Atu1103 -0.5 -1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3011 -0.5 -1.3 ArsR family transcriptional regulator compare
Atu3022 -0.5 -3.3 sugar ABC transporter permease compare
Atu2122 -0.5 -2.3 lytic murein transglycosylase compare
Atu3036 -0.5 -2.0 dipeptide ABC transporter permease compare
Atu2040 -0.5 -2.5 phosphoserine phosphatase compare
Atu3024 -0.5 -3.9 sugar ABC transporter permease compare
Atu2237 -0.5 -2.1 cytochrome c1 compare
Atu2548 -0.5 -3.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2801 -0.5 -1.4 precorrin-2 C20 methyltransferase compare
Atu8195 -0.5 -1.7 hypothetical protein compare
Atu3006 -0.5 -2.2 hypothetical protein compare
Atu2803 -0.5 -1.7 Cobalamin biosynthesis associated protein compare
Atu0236 -0.5 -1.3 hypothetical protein compare
Atu1076 -0.5 -1.7 colicin V production protein compare
Atu2740 -0.5 -2.0 transcriptional regulator, GntR family compare
Atu1398 -0.5 -1.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu1983 -0.5 -2.5 hypothetical protein compare
Atu3812 -0.5 -2.1 hypothetical protein compare
Atu1291 -0.5 -1.1 hypothetical protein compare
Atu3485 -0.5 -3.1 short chain dehydrogenase compare
Atu1868 -0.5 -2.2 tRNA/rRNA methyltransferase compare
Atu2238 -0.5 -3.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0026 -0.5 -0.5 hypothetical protein compare
Atu0689 -0.5 -3.5 ribosomal large subunit pseudouridine synthase B compare
Atu2578 -0.5 -2.4 cAMP-dependent protein kinase regulatory subunit compare
Atu5430 -0.5 -0.7 hypothetical protein compare
Atu4881 -0.5 -2.8 hypothetical protein compare
Atu3019 -0.5 -2.8 hypothetical protein compare
Atu0640 -0.5 -1.6 hypothetical protein compare
Atu0986 -0.4 -0.8 hypothetical protein compare
Atu0165 -0.4 -1.7 hypothetical protein compare
Atu0828 -0.4 -2.8 transcriptional regulator BetI compare
Atu0185 -0.4 -2.0 methylglyoxal synthase compare
Atu4876 -0.4 -3.4 oxidoreductase compare
Atu2797 -0.4 -1.7 cobalamin biosynthesis protein compare
Atu1645 -0.4 -2.7 ABC transporter, substrate binding protein compare
Atu1647 -0.4 -3.1 ABC transporter, membrane spanning protein compare
Atu4580 -0.4 -3.1 hypothetical protein compare
Atu2799 -0.4 -1.2 precorrin-6x reductase compare
Atu3466 -0.4 -1.7 ArsR family transcriptional regulator compare
Atu4852 -0.4 -1.9 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For stress Phosphomycin disodium salt in Agrobacterium fabrum C58

For stress Phosphomycin disodium salt across organisms