Experiment set5IT057 for Variovorax sp. OAS795

Compare to:

V2_10

200 most important genes:

  gene name fitness t score description  
ABID97_RS23720 -4.4 -9.2 dynamin family protein compare
ABID97_RS23645 -4.1 -1.9 PP2C family serine/threonine-protein phosphatase compare
ABID97_RS27370 -4.0 -1.5 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
ABID97_RS11290 -3.0 -1.2 DNA repair protein RadC compare
ABID97_RS24695 -3.0 -12.6 chemotaxis protein CheW compare
ABID97_RS24700 -2.9 -5.6 response regulator compare
ABID97_RS20715 -2.9 -6.8 heavy metal translocating P-type ATPase compare
ABID97_RS15100 -2.8 -3.8 helix-turn-helix transcriptional regulator compare
ABID97_RS17265 -2.8 -3.7 two-component system response regulator OmpR compare
ABID97_RS06450 -2.7 -4.4 glucans biosynthesis glucosyltransferase MdoH compare
ABID97_RS23450 -2.6 -9.4 MBOAT family protein compare
ABID97_RS05755 -2.6 -4.2 glycosyltransferase compare
ABID97_RS23455 -2.5 -6.8 hypothetical protein compare
ABID97_RS16600 -2.5 -6.3 CysB family HTH-type transcriptional regulator compare
ABID97_RS19790 -2.3 -11.7 hypothetical protein compare
ABID97_RS20425 -2.3 -4.2 DUF2818 family protein compare
ABID97_RS19795 -2.2 -6.5 hypothetical protein compare
ABID97_RS07615 -2.2 -4.3 ATP-binding protein compare
ABID97_RS02225 -2.1 -13.9 FHA domain-containing protein compare
ABID97_RS03805 -2.1 -2.3 ATP-binding protein compare
ABID97_RS01195 -2.1 -1.1 2-hydroxyacid dehydrogenase compare
ABID97_RS07610 -2.1 -1.1 response regulator transcription factor compare
ABID97_RS16470 -2.0 -2.3 translational GTPase TypA compare
ABID97_RS05670 -2.0 -3.1 glucose-1-phosphate thymidylyltransferase RfbA compare
ABID97_RS04765 -2.0 -2.6 thiol:disulfide interchange protein DsbA/DsbL compare
ABID97_RS05480 -2.0 -11.8 EAL domain-containing protein compare
ABID97_RS20720 -1.9 -4.1 Cd(II)/Pb(II)-responsive transcriptional regulator compare
ABID97_RS13980 -1.9 -1.0 RnfABCDGE type electron transport complex subunit B compare
ABID97_RS05275 -1.9 -2.5 anthranilate phosphoribosyltransferase compare
ABID97_RS17850 -1.8 -1.9 tetratricopeptide repeat protein compare
ABID97_RS26510 -1.8 -1.7 NUDIX hydrolase compare
ABID97_RS27215 -1.8 -1.4 NAD(+)--rifampin ADP-ribosyltransferase compare
ABID97_RS08430 -1.8 -2.7 tryptophan synthase subunit beta compare
ABID97_RS05765 -1.8 -5.2 UDP-glucose 4-epimerase GalE compare
ABID97_RS23325 -1.8 -8.3 cytochrome c biogenesis protein ResB compare
ABID97_RS17270 -1.7 -5.5 ATP-binding protein compare
ABID97_RS04500 -1.7 -2.0 HPr(Ser) kinase/phosphatase compare
ABID97_RS11355 -1.7 -1.8 acyl-CoA dehydrogenase family protein compare
ABID97_RS05280 -1.6 -2.6 indole-3-glycerol phosphate synthase TrpC compare
ABID97_RS12620 -1.6 -1.3 DUF447 domain-containing protein compare
ABID97_RS17050 -1.6 -1.8 RlmE family RNA methyltransferase compare
ABID97_RS28245 -1.6 -0.9 SDR family NAD(P)-dependent oxidoreductase compare
ABID97_RS16910 -1.5 -7.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABID97_RS08775 -1.5 -2.1 ribosome small subunit-dependent GTPase A compare
ABID97_RS27635 -1.5 -1.0 NAD(P)H-dependent oxidoreductase compare
ABID97_RS27655 -1.5 -1.6 pyridoxal phosphate-dependent aminotransferase compare
ABID97_RS02230 -1.5 -9.8 Stp1/IreP family PP2C-type Ser/Thr phosphatase compare
ABID97_RS16050 -1.4 -1.5 isochorismatase family cysteine hydrolase compare
ABID97_RS03910 -1.4 -2.0 orotate phosphoribosyltransferase compare
ABID97_RS17895 -1.4 -5.4 transcriptional regulator NrdR compare
ABID97_RS10405 -1.4 -1.2 efflux transporter outer membrane subunit compare
ABID97_RS15130 -1.4 -1.1 contractile injection system protein, VgrG/Pvc8 family compare
ABID97_RS04115 -1.4 -2.1 RNA-binding protein compare
ABID97_RS05750 -1.4 -2.6 glycosyltransferase compare
ABID97_RS19955 -1.3 -2.2 glycerol-3-phosphate dehydrogenase compare
ABID97_RS14260 -1.3 -6.2 FtsH protease activity modulator HflK compare
ABID97_RS14265 -1.3 -6.1 protease modulator HflC compare
ABID97_RS13560 -1.3 -1.1 ATP-binding cassette domain-containing protein compare
ABID97_RS03485 -1.3 -7.2 GtrA family protein compare
ABID97_RS10920 -1.3 -1.3 molybdenum cofactor biosynthesis protein MoaE compare
ABID97_RS13775 -1.2 -0.8 hypothetical protein compare
ABID97_RS05260 -1.2 -1.4 aminodeoxychorismate/anthranilate synthase component II compare
ABID97_RS19760 -1.2 -3.3 ROK family transcriptional regulator compare
ABID97_RS15190 -1.2 -1.5 phage baseplate assembly protein V compare
ABID97_RS26945 -1.2 -1.2 DUF3606 domain-containing protein compare
ABID97_RS23320 -1.2 -5.6 c-type cytochrome biogenesis protein CcsB compare
ABID97_RS13700 -1.2 -2.7 hypothetical protein compare
ABID97_RS04290 -1.2 -1.7 glutathione S-transferase compare
ABID97_RS27415 -1.2 -1.5 amino acid ABC transporter ATP-binding protein compare
ABID97_RS24040 -1.2 -1.8 MarR family transcriptional regulator compare
ABID97_RS12660 -1.2 -1.0 formylmethanofuran--tetrahydromethanopterin N-formyltransferase compare
ABID97_RS08765 -1.1 -3.5 CobD/CbiB family protein compare
ABID97_RS06345 -1.1 -3.4 3-deoxy-7-phosphoheptulonate synthase compare
ABID97_RS11955 -1.1 -2.2 sigma-54 dependent transcriptional regulator compare
ABID97_RS07145 -1.1 -4.4 carbohydrate kinase compare
ABID97_RS18380 -1.1 -2.2 hypothetical protein compare
ABID97_RS16985 -1.1 -2.4 transcriptional repressor LexA compare
ABID97_RS14665 -1.1 -2.1 UvrD-helicase domain-containing protein compare
ABID97_RS05475 -1.1 -7.4 TRAP transporter substrate-binding protein compare
ABID97_RS06055 -1.1 -4.1 protease HtpX compare
ABID97_RS03800 -1.1 -2.1 O-antigen ligase family protein compare
ABID97_RS07920 -1.1 -2.3 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABID97_RS05445 -1.1 -1.7 ORF6N domain-containing protein compare
ABID97_RS10565 -1.1 -3.6 phasin family protein compare
ABID97_RS04245 -1.1 -1.0 acyl-CoA thioesterase compare
ABID97_RS02510 -1.1 -8.4 NADP-dependent malic enzyme compare
ABID97_RS05095 -1.1 -1.1 DUF4150 domain-containing protein compare
ABID97_RS16950 -1.0 -4.1 MotA/TolQ/ExbB proton channel family protein compare
ABID97_RS10590 -1.0 -4.9 nicotinate phosphoribosyltransferase compare
ABID97_RS24275 -1.0 -2.3 Flp pilus assembly protein CpaB compare
ABID97_RS22605 -1.0 -4.0 L-threonylcarbamoyladenylate synthase compare
ABID97_RS20980 -1.0 -0.8 transcriptional repressor compare
ABID97_RS23025 -1.0 -6.9 sugar transferase compare
ABID97_RS13705 -1.0 -5.8 hypothetical protein compare
ABID97_RS05250 -1.0 -5.2 anthranilate synthase component I compare
ABID97_RS20515 -1.0 -1.2 NAD(P)H-quinone oxidoreductase compare
ABID97_RS22375 -1.0 -1.4 OsmC family protein compare
ABID97_RS29355 -1.0 -2.8 bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase compare
ABID97_RS02010 -1.0 -2.9 hypothetical protein compare
ABID97_RS22520 -1.0 -4.4 cache domain-containing protein compare
ABID97_RS18580 -1.0 -1.1 CoA transferase compare
ABID97_RS29410 -1.0 -2.2 hypothetical protein compare
ABID97_RS08365 -1.0 -2.9 ribonuclease III compare
ABID97_RS13920 -1.0 -3.3 IclR family transcriptional regulator compare
ABID97_RS21020 -1.0 -3.1 GNAT family N-acetyltransferase compare
ABID97_RS26535 -1.0 -1.9 dihydrolipoyllysine-residue acetyltransferase compare
ABID97_RS11030 -1.0 -1.2 arsenate reductase (glutaredoxin) compare
ABID97_RS14850 -1.0 -2.4 P-II family nitrogen regulator compare
ABID97_RS06305 -0.9 -6.8 TonB family protein compare
ABID97_RS10395 -0.9 -2.1 glycine betaine ABC transporter substrate-binding protein compare
ABID97_RS27265 -0.9 -1.3 fumarylacetoacetate hydrolase family protein compare
ABID97_RS16220 -0.9 -2.6 cytochrome-c oxidase, cbb3-type subunit II compare
ABID97_RS19110 -0.9 -2.5 hypothetical protein compare
ABID97_RS26545 -0.9 -0.8 alpha/beta fold hydrolase compare
ABID97_RS04610 -0.9 -4.2 potassium transporter Kup compare
ABID97_RS27665 -0.9 -1.4 LysR family transcriptional regulator compare
ABID97_RS22760 -0.9 -3.9 TetR/AcrR family transcriptional regulator compare
ABID97_RS23015 -0.9 -3.4 glycosyltransferase family 4 protein compare
ABID97_RS01415 -0.9 -1.6 DUF1840 domain-containing protein compare
ABID97_RS27900 -0.9 -1.2 DUF4242 domain-containing protein compare
ABID97_RS04520 -0.9 -2.1 MotA/TolQ/ExbB proton channel family protein compare
ABID97_RS07000 -0.9 -4.9 threonine ammonia-lyase, biosynthetic compare
ABID97_RS11785 -0.8 -1.0 TRAP transporter substrate-binding protein compare
ABID97_RS13895 -0.8 -1.4 hypothetical protein compare
ABID97_RS02665 -0.8 -2.8 membrane protein insertion efficiency factor YidD compare
ABID97_RS01770 -0.8 -3.9 VOC family protein compare
ABID97_RS28450 -0.8 -2.0 helix-turn-helix transcriptional regulator compare
ABID97_RS06460 -0.8 -1.5 sigma 54-interacting transcriptional regulator compare
ABID97_RS14920 -0.8 -4.5 IclR family transcriptional regulator compare
ABID97_RS24460 -0.8 -1.9 2-dehydropantoate 2-reductase compare
ABID97_RS11425 -0.8 -1.3 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS22875 -0.8 -0.9 ABC transporter ATP-binding protein compare
ABID97_RS24485 -0.8 -4.0 formyl-CoA transferase compare
ABID97_RS09330 -0.8 -4.5 FCD domain-containing protein compare
ABID97_RS26830 -0.8 -1.1 hypothetical protein compare
ABID97_RS19065 -0.8 -2.3 GntR family transcriptional regulator compare
ABID97_RS22460 -0.8 -2.1 hypothetical protein compare
ABID97_RS16195 -0.8 -1.0 hypothetical protein compare
ABID97_RS26810 -0.8 -1.0 DJ-1/PfpI family protein compare
ABID97_RS29505 -0.8 -1.5 SDR family oxidoreductase compare
ABID97_RS23695 -0.8 -4.5 heat-inducible transcriptional repressor HrcA compare
ABID97_RS14055 -0.8 -1.3 DUF883 family protein compare
ABID97_RS06920 -0.8 -1.3 7-cyano-7-deazaguanine synthase QueC compare
ABID97_RS08760 -0.8 -2.7 CoA pyrophosphatase compare
ABID97_RS27385 -0.8 -1.3 biotin-dependent carboxyltransferase family protein compare
ABID97_RS15175 -0.8 -1.7 phage tail protein I compare
ABID97_RS12180 -0.8 -0.8 hypothetical protein compare
ABID97_RS18630 -0.8 -1.2 SDR family oxidoreductase compare
ABID97_RS22765 -0.8 -1.4 phenylacetic acid degradation protein PaaY compare
ABID97_RS02060 -0.8 -5.5 TonB-dependent siderophore receptor compare
ABID97_RS15575 -0.8 -2.4 sulfate ABC transporter permease subunit CysT compare
ABID97_RS15390 -0.7 -1.4 P1 family peptidase compare
ABID97_RS27195 -0.7 -1.0 hypothetical protein compare
ABID97_RS27140 -0.7 -1.0 winged helix-turn-helix domain-containing protein compare
ABID97_RS00400 -0.7 -1.8 DUF3617 family protein compare
ABID97_RS27780 -0.7 -0.9 efflux RND transporter periplasmic adaptor subunit compare
ABID97_RS11170 -0.7 -2.0 GntR family transcriptional regulator compare
ABID97_RS28945 -0.7 -0.8 tripartite tricarboxylate transporter TctB family protein compare
ABID97_RS17560 -0.7 -2.7 hypothetical protein compare
ABID97_RS24055 -0.7 -2.3 TetR/AcrR family transcriptional regulator compare
ABID97_RS12665 -0.7 -1.2 formylmethanofuran dehydrogenase subunit C compare
ABID97_RS20020 -0.7 -1.2 LacI family DNA-binding transcriptional regulator compare
ABID97_RS21890 -0.7 -1.2 DUF2878 domain-containing protein compare
ABID97_RS05030 -0.7 -2.0 hypothetical protein compare
ABID97_RS15160 -0.7 -2.9 phage tail sheath protein compare
ABID97_RS22195 -0.7 -0.8 hypothetical protein compare
ABID97_RS27990 -0.7 -1.0 carboxymuconolactone decarboxylase family protein compare
ABID97_RS25730 -0.7 -1.5 ABC transporter permease compare
ABID97_RS17665 -0.7 -0.8 DUF1993 domain-containing protein compare
ABID97_RS10355 -0.7 -2.7 FadR/GntR family transcriptional regulator compare
ABID97_RS24170 -0.7 -2.6 ATP-binding protein compare
ABID97_RS06115 -0.7 -1.6 hypothetical protein compare
ABID97_RS22055 -0.7 -1.2 LysR substrate-binding domain-containing protein compare
ABID97_RS15185 -0.7 -2.3 GPW/gp25 family protein compare
ABID97_RS22435 -0.7 -3.2 alpha/beta fold hydrolase compare
ABID97_RS22595 -0.7 -2.1 3',5'-nucleoside bisphosphate phosphatase compare
ABID97_RS04110 -0.7 -4.7 tripartite tricarboxylate transporter TctB family protein compare
ABID97_RS24045 -0.7 -2.2 type II toxin-antitoxin system prevent-host-death family antitoxin compare
ABID97_RS22105 -0.7 -1.6 ABC transporter ATP-binding protein compare
ABID97_RS26150 -0.7 -2.0 TetR/AcrR family transcriptional regulator compare
ABID97_RS23170 -0.7 -1.0 UDP-N-acetylglucosamine 1-carboxyvinyltransferase compare
ABID97_RS19740 -0.7 -0.9 sensor histidine kinase N-terminal domain-containing protein compare
ABID97_RS07805 -0.7 -1.7 50S ribosomal protein L33 compare
ABID97_RS15205 -0.7 -1.1 phage tail protein compare
ABID97_RS22450 -0.7 -2.5 YbdD/YjiX family protein compare
ABID97_RS10375 -0.7 -2.0 glucarate dehydratase compare
ABID97_RS02525 -0.7 -3.8 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABID97_RS28600 -0.7 -0.6 aspartate aminotransferase family protein compare
ABID97_RS22315 -0.7 -0.7 LysR family transcriptional regulator compare
ABID97_RS16340 -0.7 -1.8 ankyrin repeat domain-containing protein compare
ABID97_RS26395 -0.7 -1.0 DUF2231 domain-containing protein compare
ABID97_RS15840 -0.7 -1.9 aminotransferase class V-fold PLP-dependent enzyme compare
ABID97_RS15505 -0.7 -0.6 ATP-binding cassette domain-containing protein compare
ABID97_RS07390 -0.7 -1.7 rhodanese-like domain-containing protein compare
ABID97_RS20005 -0.7 -2.5 transglutaminase family protein compare
ABID97_RS14980 -0.7 -1.2 hypothetical protein compare
ABID97_RS18645 -0.7 -1.8 aromatic ring-hydroxylating dioxygenase subunit alpha compare
ABID97_RS23485 -0.6 -1.0 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
ABID97_RS13325 -0.6 -0.6 antibiotic biosynthesis monooxygenase compare
ABID97_RS14570 -0.6 -2.3 GNAT family N-acyltransferase compare


Specific Phenotypes

None in this experiment

For Variovorax sp. OAS795 in phage experiments