Experiment set5IT054 for Agrobacterium fabrum C58

R2A with Gentamicin sulfate salt 0.00125 mM

Group: stress
Media: R2A + Gentamicin sulfate salt (0.00125 mM)
Culturing: Agro_ML11, 96 deep-well microplate; 0.8 mL volume, Aerobic, at 28 (C), shaken=200 rpm
By: Hans Carlson and Mitchell Thompson on 22-Jun-21
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 4B A8

Specific Phenotypes

For 7 genes in this experiment

For stress Gentamicin sulfate salt in Agrobacterium fabrum C58

For stress Gentamicin sulfate salt across organisms

SEED Subsystems

Subsystem	#Specific
Hfl operon	2
Maltose and Maltodextrin Utilization	1
ZZ gjo need homes	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Galactose metabolism
• Lysine degradation
• Starch and sucrose metabolism
• Peptidoglycan biosynthesis
• Biotin metabolism
• Sulfur metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
starch degradation I	3	1	1
glycogen degradation I	8	6	1