Experiment set5IT052 for Variovorax sp. OAS795

Compare to:

V1_1

200 most detrimental genes:

  gene name fitness t score description  
ABID97_RS22625 +1.6 11.7 HAMP domain-containing sensor histidine kinase compare
ABID97_RS26160 +1.5 1.6 nuclear transport factor 2 family protein compare
ABID97_RS22620 +1.4 7.7 response regulator transcription factor compare
ABID97_RS29015 +1.0 1.5 transcriptional regulator GcvA compare
ABID97_RS09595 +0.9 1.5 Arc family DNA-binding protein compare
ABID97_RS13260 +0.9 2.0 acyl-CoA dehydrogenase family protein compare
ABID97_RS20905 +0.9 1.7 hypothetical protein compare
ABID97_RS19595 +0.9 1.7 TRAP transporter small permease compare
ABID97_RS12110 +0.8 1.2 phosphoribosyltransferase family protein compare
ABID97_RS22850 +0.8 1.9 flavin reductase family protein compare
ABID97_RS15830 +0.8 2.4 fumarylacetoacetate hydrolase family protein compare
ABID97_RS16580 +0.8 1.9 leucyl aminopeptidase compare
ABID97_RS01195 +0.8 1.0 2-hydroxyacid dehydrogenase compare
ABID97_RS23280 +0.7 4.6 PilN domain-containing protein compare
ABID97_RS29305 +0.7 2.3 YncE family protein compare
ABID97_RS05125 +0.7 1.5 DUF2169 domain-containing protein compare
ABID97_RS21350 +0.7 1.1 hypothetical protein compare
ABID97_RS19715 +0.7 1.0 shikimate dehydrogenase compare
ABID97_RS19695 +0.7 0.9 alpha/beta fold hydrolase compare
ABID97_RS11070 +0.7 1.5 enolase C-terminal domain-like protein compare
ABID97_RS12170 +0.7 1.2 DUF6531 domain-containing protein compare
ABID97_RS16065 +0.7 1.3 PDR/VanB family oxidoreductase compare
ABID97_RS19220 +0.7 1.1 DNA polymerase Y family protein compare
ABID97_RS25630 +0.7 1.8 HupE/UreJ family protein compare
ABID97_RS18060 +0.7 2.0 HD domain-containing protein compare
ABID97_RS09800 +0.7 0.9 hypothetical protein compare
ABID97_RS26500 +0.7 1.7 saccharopine dehydrogenase C-terminal domain-containing protein compare
ABID97_RS23985 +0.6 2.9 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
ABID97_RS23270 +0.6 4.8 pilus assembly protein PilP compare
ABID97_RS26345 +0.6 2.4 VOC family protein compare
ABID97_RS19550 +0.6 0.9 phosphatase PAP2 family protein compare
ABID97_RS17665 +0.6 1.2 DUF1993 domain-containing protein compare
ABID97_RS13025 +0.6 0.7 helix-turn-helix domain-containing protein compare
ABID97_RS13815 +0.6 2.1 phage major capsid protein compare
ABID97_RS23275 +0.6 4.5 type 4a pilus biogenesis protein PilO compare
ABID97_RS13435 +0.6 0.7 fumarylacetoacetate hydrolase family protein compare
ABID97_RS11960 +0.6 0.8 hypothetical protein compare
ABID97_RS01070 +0.6 1.2 Crp/Fnr family transcriptional regulator compare
ABID97_RS25475 +0.6 1.8 LysR family transcriptional regulator compare
ABID97_RS05570 +0.6 2.7 LysR family transcriptional regulator compare
ABID97_RS18520 +0.6 2.4 ABC transporter substrate-binding protein compare
ABID97_RS15410 +0.6 2.3 dipeptide ABC transporter ATP-binding protein compare
ABID97_RS26655 +0.6 1.4 hypothetical protein compare
ABID97_RS08130 +0.6 0.8 DUF3297 family protein compare
ABID97_RS11770 +0.6 1.3 ribulose-bisphosphate carboxylase large subunit family protein compare
ABID97_RS24195 +0.6 1.9 3-oxoacid CoA-transferase subunit B compare
ABID97_RS11280 +0.6 2.3 hypothetical protein compare
ABID97_RS24705 +0.6 3.1 response regulator compare
ABID97_RS17480 +0.5 1.6 malonyl-CoA decarboxylase compare
ABID97_RS00255 +0.5 4.9 type IV pilus twitching motility protein PilT compare
ABID97_RS12680 +0.5 2.0 HAD family phosphatase compare
ABID97_RS22825 +0.5 1.0 ABC transporter ATP-binding protein compare
ABID97_RS08890 +0.5 1.5 aromatic-ring-hydroxylating dioxygenase subunit beta compare
ABID97_RS09680 +0.5 1.2 hypothetical protein compare
ABID97_RS28030 +0.5 1.4 branched-chain amino acid ABC transporter permease compare
ABID97_RS25685 +0.5 1.8 four-carbon acid sugar kinase family protein compare
ABID97_RS21195 +0.5 2.3 ABC transporter substrate-binding protein compare
ABID97_RS18495 +0.5 0.7 DUF2889 domain-containing protein compare
ABID97_RS19325 +0.5 1.0 DUF2894 domain-containing protein compare
ABID97_RS13760 +0.5 1.1 hypothetical protein compare
ABID97_RS29215 +0.5 0.8 LysR family transcriptional regulator compare
ABID97_RS23265 +0.5 2.9 type IV pilus secretin PilQ compare
ABID97_RS15720 +0.5 0.9 branched-chain amino acid ABC transporter permease compare
ABID97_RS02135 +0.5 2.9 GspH/FimT family pseudopilin compare
ABID97_RS23360 +0.5 0.6 hypothetical protein compare
ABID97_RS19465 +0.5 1.1 CoA transferase compare
ABID97_RS09340 +0.5 1.1 branched-chain amino acid ABC transporter permease compare
ABID97_RS16890 +0.5 2.2 adenylyl-sulfate kinase compare
ABID97_RS19405 +0.5 3.1 3-hydroxyisobutyrate dehydrogenase compare
ABID97_RS22630 +0.5 2.1 HNH endonuclease compare
ABID97_RS19030 +0.5 1.3 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS06175 +0.5 4.4 STAS domain-containing protein compare
ABID97_RS18820 +0.5 1.1 PrpF domain-containing protein compare
ABID97_RS22555 +0.5 1.2 urea ABC transporter permease subunit UrtC compare
ABID97_RS21845 +0.5 2.5 acetate/propionate family kinase compare
ABID97_RS26850 +0.5 2.1 MerR family transcriptional regulator compare
ABID97_RS14190 +0.5 1.3 RluA family pseudouridine synthase compare
ABID97_RS12300 +0.5 1.2 hypothetical protein compare
ABID97_RS27715 +0.5 1.6 GntR family transcriptional regulator compare
ABID97_RS26350 +0.5 1.4 ABC transporter substrate-binding protein compare
ABID97_RS03730 +0.5 1.6 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
ABID97_RS11075 +0.5 1.6 ABC transporter ATP-binding protein compare
ABID97_RS25890 +0.5 1.4 ABC transporter ATP-binding protein compare
ABID97_RS05215 +0.5 0.9 hypothetical protein compare
ABID97_RS05610 +0.5 1.5 LysE family translocator compare
ABID97_RS24690 +0.5 3.1 methyl-accepting chemotaxis protein compare
ABID97_RS23040 +0.5 3.2 polysaccharide biosynthesis/export family protein compare
ABID97_RS06825 +0.5 1.3 LysR family transcriptional regulator compare
ABID97_RS11325 +0.5 1.2 ATP-binding cassette domain-containing protein compare
ABID97_RS26495 +0.5 1.6 Lrp/AsnC family transcriptional regulator compare
ABID97_RS13250 +0.5 1.5 3-oxoacid CoA-transferase subunit B compare
ABID97_RS23435 +0.5 3.7 type II secretion system F family protein compare
ABID97_RS16150 +0.5 2.0 hemerythrin domain-containing protein compare
ABID97_RS20360 +0.5 1.3 carotenoid 1,2-hydratase compare
ABID97_RS23550 +0.5 1.3 urease accessory UreF family protein compare
ABID97_RS28190 +0.5 2.3 alpha/beta fold hydrolase compare
ABID97_RS02715 +0.5 2.3 polyhydroxyalkanoate granule-associated phasin compare
ABID97_RS12335 +0.5 0.8 SDR family NAD(P)-dependent oxidoreductase compare
ABID97_RS03915 +0.5 3.3 DUF4124 domain-containing protein compare
ABID97_RS13455 +0.5 1.6 ABC transporter substrate-binding protein compare
ABID97_RS12555 +0.5 1.9 MarR family transcriptional regulator compare
ABID97_RS21740 +0.5 1.7 methionine ABC transporter permease compare
ABID97_RS13620 +0.5 1.6 carbamoyltransferase HypF compare
ABID97_RS24815 +0.5 1.9 sigma-70 family RNA polymerase sigma factor compare
ABID97_RS29270 +0.5 0.6 cytochrome b561 domain-containing protein compare
ABID97_RS18730 +0.5 1.8 cytochrome P450 compare
ABID97_RS26605 +0.5 1.2 sigma-54 dependent transcriptional regulator compare
ABID97_RS00560 +0.5 2.1 DUF4148 domain-containing protein compare
ABID97_RS13440 +0.5 1.9 fumarylacetoacetate hydrolase family protein compare
ABID97_RS07490 +0.4 1.2 YceH family protein compare
ABID97_RS27385 +0.4 1.3 biotin-dependent carboxyltransferase family protein compare
ABID97_RS03555 +0.4 1.1 (2Fe-2S)-binding protein compare
ABID97_RS11545 +0.4 0.5 branched-chain amino acid ABC transporter permease compare
ABID97_RS25745 +0.4 0.7 dipeptide ABC transporter ATP-binding protein compare
ABID97_RS28660 +0.4 1.9 DUF2474 domain-containing protein compare
ABID97_RS27655 +0.4 0.9 pyridoxal phosphate-dependent aminotransferase compare
ABID97_RS28295 +0.4 2.3 tRNA-uridine aminocarboxypropyltransferase compare
ABID97_RS26405 +0.4 1.3 hypothetical protein compare
ABID97_RS03785 +0.4 1.1 recombination-associated protein RdgC compare
ABID97_RS08200 +0.4 3.3 LytTR family DNA-binding domain-containing protein compare
ABID97_RS18960 +0.4 1.3 branched-chain amino acid ABC transporter permease compare
ABID97_RS19725 +0.4 2.2 IclR family transcriptional regulator C-terminal domain-containing protein compare
ABID97_RS17055 +0.4 0.9 YhbY family RNA-binding protein compare
ABID97_RS17070 +0.4 1.0 transcription elongation factor GreA compare
ABID97_RS09735 +0.4 1.8 DUF3168 domain-containing protein compare
ABID97_RS11235 +0.4 0.8 NAD-dependent succinate-semialdehyde dehydrogenase compare
ABID97_RS22900 +0.4 1.8 ATP-dependent Clp protease proteolytic subunit compare
ABID97_RS15470 +0.4 1.4 NADPH-dependent FMN reductase compare
ABID97_RS23430 +0.4 3.1 type IV-A pilus assembly ATPase PilB compare
ABID97_RS25540 +0.4 1.8 sugar ABC transporter ATP-binding protein compare
ABID97_RS17930 +0.4 2.0 type IV pilus modification protein PilV compare
ABID97_RS27925 +0.4 1.4 acetaldehyde dehydrogenase (acetylating) compare
ABID97_RS16880 +0.4 1.5 hypothetical protein compare
ABID97_RS13320 +0.4 1.2 LysR family transcriptional regulator compare
ABID97_RS28725 +0.4 0.8 hypothetical protein compare
ABID97_RS04580 +0.4 1.5 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS17485 +0.4 1.0 GntR family transcriptional regulator compare
ABID97_RS18490 +0.4 0.9 enoyl-CoA hydratase-related protein compare
ABID97_RS00980 +0.4 2.0 pseudouridine synthase compare
ABID97_RS13615 +0.4 0.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
ABID97_RS12495 +0.4 1.3 acyclic terpene utilization AtuA family protein compare
ABID97_RS28065 +0.4 2.0 FAD-dependent oxidoreductase compare
ABID97_RS19040 +0.4 0.7 isocitrate/isopropylmalate dehydrogenase family protein compare
ABID97_RS13265 +0.4 1.0 tripartite tricarboxylate transporter substrate binding protein compare
ABID97_RS11985 +0.4 1.3 hypothetical protein compare
ABID97_RS04960 +0.4 0.4 ATP-binding protein compare
ABID97_RS27760 +0.4 0.5 DUF3237 domain-containing protein compare
ABID97_RS09705 +0.4 1.4 hypothetical protein compare
ABID97_RS27690 +0.4 0.7 M23 family metallopeptidase compare
ABID97_RS25765 +0.4 1.8 homoserine kinase compare
ABID97_RS10560 +0.4 2.5 3-hydroxyacyl-CoA dehydrogenase compare
ABID97_RS17445 +0.4 1.6 universal stress protein compare
ABID97_RS21190 +0.4 0.6 sugar ABC transporter permease compare
ABID97_RS11430 +0.4 1.5 aldehyde dehydrogenase family protein compare
ABID97_RS18565 +0.4 1.0 TetR/AcrR family transcriptional regulator compare
ABID97_RS05025 +0.4 2.7 caspase family protein compare
ABID97_RS28960 +0.4 1.4 AMP-binding protein compare
ABID97_RS17255 +0.4 0.8 SIMPL domain-containing protein compare
ABID97_RS26425 +0.4 1.2 ABC transporter ATP-binding protein compare
ABID97_RS29055 +0.4 1.6 acetate--CoA ligase family protein compare
ABID97_RS05235 +0.4 0.5 PA2169 family four-helix-bundle protein compare
ABID97_RS26895 +0.4 0.9 citrate synthase family protein compare
ABID97_RS28870 +0.4 2.4 sensor histidine kinase N-terminal domain-containing protein compare
ABID97_RS15780 +0.4 1.5 isovaleryl-CoA dehydrogenase compare
ABID97_RS23845 +0.4 1.2 biotin-dependent carboxyltransferase family protein compare
ABID97_RS14810 +0.4 2.2 hypothetical protein compare
ABID97_RS17760 +0.4 2.1 hypothetical protein compare
ABID97_RS06995 +0.4 2.1 type II secretion system protein N compare
ABID97_RS18590 +0.4 1.9 NAD(P)/FAD-dependent oxidoreductase compare
ABID97_RS26670 +0.4 1.6 DUF1801 domain-containing protein compare
ABID97_RS13310 +0.4 0.6 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABID97_RS18255 +0.4 0.4 hypothetical protein compare
ABID97_RS27820 +0.4 0.8 ABC transporter substrate-binding protein compare
ABID97_RS13810 +0.4 0.7 phage portal protein compare
ABID97_RS22375 +0.4 0.6 OsmC family protein compare
ABID97_RS01825 +0.4 3.3 LysM peptidoglycan-binding domain-containing protein compare
ABID97_RS15395 +0.4 0.8 glutathione ABC transporter permease GsiD compare
ABID97_RS27080 +0.4 1.1 DUF6616 family protein compare
ABID97_RS07090 +0.4 2.7 lipocalin family protein compare
ABID97_RS10955 +0.4 1.6 branched-chain amino acid ABC transporter permease compare
ABID97_RS27910 +0.4 1.4 DUF3422 domain-containing protein compare
ABID97_RS23380 +0.4 2.9 lytic transglycosylase domain-containing protein compare
ABID97_RS09945 +0.4 1.8 nitrogen regulation protein NR(I) compare
ABID97_RS17640 +0.4 0.5 hydroxysqualene dehydroxylase HpnE compare
ABID97_RS17945 +0.4 1.2 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
ABID97_RS26080 +0.4 1.6 LytTR family DNA-binding domain-containing protein compare
ABID97_RS23440 +0.4 2.9 A24 family peptidase compare
ABID97_RS10985 +0.4 1.5 DUF3299 domain-containing protein compare
ABID97_RS06415 +0.4 2.9 sigma-54 dependent transcriptional regulator compare
ABID97_RS28645 +0.4 1.4 amidohydrolase family protein compare
ABID97_RS29335 +0.4 1.4 glycosyltransferase family 4 protein compare
ABID97_RS10115 +0.4 1.9 adenosine deaminase compare
ABID97_RS25920 +0.4 0.9 GNAT family N-acetyltransferase compare
ABID97_RS06735 +0.4 0.6 hypothetical protein compare
ABID97_RS22790 +0.4 0.9 1,2-phenylacetyl-CoA epoxidase subunit PaaB compare
ABID97_RS27895 +0.4 0.9 AraC family transcriptional regulator compare
ABID97_RS29075 +0.4 2.2 hydrolase compare
ABID97_RS13230 +0.4 2.3 LysR family transcriptional regulator compare
ABID97_RS02185 +0.4 2.5 DapH/DapD/GlmU-related protein compare
ABID97_RS16820 +0.4 1.7 DUF1109 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment