Experiment set5IT048 for Agrobacterium fabrum C58

Compare to:

R2A with Tetracycline hydrochloride 0.002 mM

Group: stress
Media: R2A + Tetracycline hydrochloride (0.002 mM)
Culturing: Agro_ML11, 96 deep-well microplate; 0.8 mL volume, Aerobic, at 28 (C), shaken=700 rpm
By: Hans Carlson and Mitchell Thompson on 22-Jun-21
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1B C7

Specific Phenotypes

For 25 genes in this experiment

For stress Tetracycline hydrochloride in Agrobacterium fabrum C58

For stress Tetracycline hydrochloride across organisms

SEED Subsystems

Subsystem #Specific
Multidrug Resistance Efflux Pumps 3
Multidrug efflux pump in Campylobacter jejuni (CmeABC operon) 2
Bacterial RNA-metabolizing Zn-dependent hydrolases 1
Conserved gene cluster associated with Met-tRNA formyltransferase 1
Copper homeostasis: copper tolerance 1
Hfl operon 1
Phosphate metabolism 1
RNA processing and degradation, bacterial 1
Ribosome biogenesis bacterial 1
ZZ gjo need homes 1
cAMP signaling in bacteria 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
tRNA processing 10 10 2