Experiment set5IT045 for Agrobacterium fabrum C58

Compare to:

R2A with Lithium chloride 900 mM

200 most important genes:

  gene name fitness t score description  
Atu4166 -5.6 -3.0 UDP-glucose 4-epimerase compare
Atu4616 -4.4 -3.7 dTDP-4-dehydrorhamnose reductase compare
Atu0912 -4.0 -2.1 Na+/H+ antiporter compare
Atu4618 -4.0 -14.3 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -3.5 -8.5 glycosyltransferase compare
Atu4613 -3.4 -22.0 glycosyltransferase compare
Atu4615 -3.4 -13.9 glucose-1-phosphate thymidylyltransferase compare
Atu4617 -3.4 -12.6 dTDP-D-glucose-4,6-dehydratase compare
Atu3353 -3.4 -12.1 mannose-1-phosphate guanylyltransferase compare
Atu1028 -3.3 -2.9 hypothetical protein compare
Atu2183 -3.2 -9.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0017 -3.2 -2.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1687 -2.8 -6.7 anthranilate phosphoribosyltransferase compare
Atu3311 -2.6 -15.4 phosphomannose isomerase compare
Atu4317 -2.5 -4.3 TetR family transcriptional regulator compare
Atu2289 -2.4 -10.3 anthranilate synthase component I and II compare
Atu0031 -2.3 -2.2 PTS system, IIA component compare
Atu1688 -2.2 -4.7 indole-3-glycerol-phosphate synthase compare
Atu0399 -2.1 -5.5 dihydroorotase compare
Atu1308 -2.0 -4.0 aspartate carbamoyl transferase catalytic subunit compare
Atu0486 -2.0 -3.9 dihydroorotate dehydrogenase compare
Atu0041 -1.9 -1.9 glutamine amidotransferase compare
Atu0298 -1.9 -7.5 orotidine 5 compare
Atu1307 -1.8 -4.3 dihydroorotase compare
Atu4470 -1.7 -9.3 iron ABC transporter ATPase compare
Atu1686 -1.6 -8.5 peptidyl-prolyl cis-trans isomerse D compare
Atu3754 -1.6 -5.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0039 -1.6 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu3496 -1.5 -2.8 hypothetical protein compare
Atu0400 -1.5 -5.0 orotate phosphoribosyltransferase compare
Atu3750 -1.3 -3.0 thiamine-phosphate pyrophosphorylase compare
Atu8138 -1.3 -1.7 hypothetical protein compare
Atu1714 -1.3 -1.8 exonuclease III compare
Atu4608 -1.2 -8.8 hypothetical protein compare
Atu0386 -1.2 -1.9 hypothetical protein compare
Atu4471 -1.2 -6.7 ABC transporter substrate-binding protein compare
Atu6098 -1.2 -0.9 transcriptional regulator, HTH family compare
Atu1844 -1.1 -2.9 Phosphoribosylformylglycinamidine synthetase compare
Atu0647 -1.1 -4.7 phosphoribosylamine--glycine ligase compare
Atu1021 -1.1 -2.9 outer membrane protein compare
Atu4468 -1.1 -5.4 iron transport ABC transporter permease compare
Atu0361 -1.1 -2.9 transcriptional regulator compare
Atu1163 -1.1 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4609 -1.1 -7.3 glycosyltransferase compare
Atu1141 -1.0 -3.6 Phosphoribosylglycinamide synthetase compare
Atu0025 -1.0 -1.1 hypothetical protein compare
Atu0886 -1.0 -1.1 hypothetical protein compare
Atu2746 -0.9 -2.3 hypothetical protein compare
Atu6036 -0.9 -1.2 entry-exclusion protein compare
Atu4610 -0.9 -6.6 sugar nucleotide epimerase/dehydratase compare
Atu3727 -0.9 -2.2 hypothetical protein compare
Atu1810 -0.9 -1.2 hypothetical protein compare
Atu0976 -0.9 -2.6 cycL protein compare
Atu0434 -0.9 -2.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1182 -0.9 -2.1 hypothetical protein compare
Atu1009 -0.9 -2.2 hypothetical protein compare
Atu5107 -0.9 -2.7 hypothetical protein compare
Atu2379 -0.8 -4.7 phosphomannomutase compare
Atu1845 -0.8 -3.4 phosphoribosylformylglycinamidine synthase I compare
Atu1850 -0.8 -2.3 phosphoribosylformylglycinamidine synthetase II compare
Atu1983 -0.8 -3.6 hypothetical protein compare
Atu1364 -0.8 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4418 -0.8 -2.2 glutaryl-CoA dehydrogenase compare
Atu0876 -0.8 -1.1 superoxide dismutase compare
Atu2125 -0.8 -1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3008 -0.8 -0.9 hypothetical protein compare
Atu1075 -0.8 -3.5 amidophosphoribosyltransferase compare
Atu1535 -0.8 -1.4 cytochrome c oxidase, FixQ chain compare
Atu2207 -0.8 -3.1 two component sensor kinase compare
Atu1344 -0.7 -1.5 hypothetical protein compare
Atu1038 -0.7 -2.9 two component response regulator compare
Atu3481 -0.7 -2.8 enoyl-CoA hydratase compare
Atu2217 -0.7 -2.9 hypothetical protein compare
Atu1739 -0.7 -2.2 permease compare
Atu2057 -0.7 -1.6 DNA helicase II compare
Atu2620 -0.7 -1.1 hypothetical protein compare
Atu2235 -0.7 -1.6 hypothetical protein compare
Atu0141 -0.7 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu0331 -0.7 -1.3 sigma-54 modulation protein compare
Atu0894 -0.7 -2.1 ABC transporter, membrane spanning protein compare
Atu8165 -0.7 -3.0 hypothetical protein compare
Atu0272 -0.7 -2.2 transcriptional regulator, MarR family compare
Atu1127 -0.7 -1.3 molybdopterin converting factor small subunit compare
Atu1685 -0.7 -0.7 hypothetical protein compare
Atu4882 -0.7 -1.6 hypothetical protein compare
Atu4469 -0.7 -1.7 iron ABC transporter permease compare
Atu1708 -0.7 -3.5 hypothetical protein compare
Atu1734 -0.7 -1.6 hypothetical protein compare
Atu5125 -0.7 -3.0 GntR family transcriptional regulator compare
Atu0861 -0.7 -1.3 hypothetical protein compare
Atu4773 -0.7 -1.2 two component response regulator compare
Atu3001 -0.7 -1.6 hypothetical protein compare
Atu2692 -0.6 -2.4 intracellular septation protein compare
Atu1258 -0.6 -2.5 ATP-dependent Clp protease, proteolytic subunit compare
Atu4896 -0.6 -1.3 acetyltransferase compare
Atu3486 -0.6 -1.9 DeoR family transcriptional regulator compare
Atu3755 -0.6 -2.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu5451 -0.6 -0.9 hypothetical protein compare
Atu3668 -0.6 -2.1 siderophore biosynthesis protein compare
Atu0152 -0.6 -0.7 hypothetical protein compare
Atu0718 -0.6 -1.7 hypothetical protein compare
Atu1644 -0.6 -2.6 hypothetical protein compare
Atu0922 -0.6 -1.8 hypothetical protein compare
Atu1581 -0.6 -0.9 hypothetical protein compare
Atu4075 -0.6 -2.2 glycogen synthase compare
Atu4093 -0.6 -1.6 hypothetical protein compare
Atu4897 -0.6 -1.1 hypothetical protein compare
Atu1646 -0.6 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0606 -0.6 -1.1 hypothetical protein compare
Atu0388 -0.6 -3.5 two component sensor kinase compare
Atu2684 -0.6 -0.7 hypothetical protein compare
Atu1005 -0.6 -1.2 hypothetical protein compare
Atu0784 -0.6 -1.8 hypothetical protein compare
Atu3495 -0.5 -3.8 diguanylate cyclase compare
Atu0184 -0.5 -0.8 glucokinase compare
Atu2040 -0.5 -2.4 phosphoserine phosphatase compare
Atu5163 -0.5 -1.6 type IV secretion protein AvhB2 compare
Atu5186 -0.5 -1.4 hypothetical protein compare
Atu2555 -0.5 -1.6 L-lysine 2,3-aminomutase compare
Atu2238 -0.5 -2.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1874 -0.5 -1.2 RecA protein compare
Atu3413 -0.5 -2.2 AsnC family transcriptional regulator compare
Atu2113 -0.5 -1.0 N-acetylmuramoyl-L-alanine amidase compare
Atu8025 -0.5 -0.9 hypothetical protein compare
Atu2017 -0.5 -0.6 hypothetical protein compare
Atu0893 -0.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0185 -0.5 -1.9 methylglyoxal synthase compare
Atu3739 -0.5 -1.5 phosphoglycerate kinase compare
Atu4893 -0.5 -2.6 hypothetical protein compare
Atu3572 -0.5 -3.7 transcriptional regulator compare
Atu2832 -0.5 -1.6 tRNA modification GTPase compare
Atu0189 -0.5 -1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu1140 -0.5 -1.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1439 -0.5 -1.3 hypothetical protein compare
Atu2267 -0.5 -2.2 hypothetical protein compare
Atu0353 -0.5 -2.9 acetyltransferase compare
Atu3249 -0.5 -2.1 septum formation inhibitor compare
Atu1677 -0.5 -1.6 queuine tRNA-ribosyltransferase compare
Atu4869 -0.5 -1.9 hypothetical protein compare
Atu1970 -0.5 -1.7 hypothetical protein compare
Atu0135 -0.5 -2.0 uracil phosphoribosyltransferase compare
Atu0181 -0.5 -1.0 hypothetical protein compare
Atu2526 -0.5 -1.5 hypothetical protein compare
Atu0641 -0.5 -1.6 hypothetical protein compare
Atu6149 -0.5 -1.6 hypothetical protein compare
Atu2045 -0.5 -1.3 HFLK protein compare
Atu1219 -0.5 -0.5 hypothetical protein compare
Atu4385 -0.5 -2.2 hypothetical protein compare
Atu1189 -0.5 -0.7 hypothetical protein compare
Atu4532 -0.4 -2.7 shikimate 5-dehydrogenase compare
Atu0499 -0.4 -2.9 hypothetical protein compare
Atu2831 -0.4 -1.7 glucose inhibited division protein A compare
Atu0638 -0.4 -1.2 hypothetical protein compare
Atu2787 -0.4 -0.6 hypothetical protein compare
Atu3834 -0.4 -2.6 hypothetical protein compare
Atu3707 -0.4 -1.0 phosphoserine aminotransferase compare
Atu1696 -0.4 -2.1 hypothetical protein compare
Atu3017 -0.4 -0.7 phosphoglyceromutase compare
Atu4346 -0.4 -1.5 hypothetical protein compare
Atu4878 -0.4 -1.9 hypothetical protein compare
Atu3006 -0.4 -1.8 hypothetical protein compare
Atu1904 -0.4 -1.1 transcriptional regulator compare
Atu0598 -0.4 -1.9 phosphogluconate dehydratase compare
Atu4108 -0.4 -2.6 ribonuclease D compare
Atu1805 -0.4 -1.8 hypothetical protein compare
Atu1190 -0.4 -1.6 hypothetical protein compare
Atu3773 -0.4 -0.9 hypothetical protein compare
Atu2548 -0.4 -3.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu5075 -0.4 -2.2 GntR family transcriptional regulator compare
Atu1468 -0.4 -2.4 hypothetical protein compare
Atu3336 -0.4 -1.7 hypothetical protein compare
Atu0502 -0.4 -1.8 acetyl-CoA acetyltransferase compare
Atu4456 -0.4 -1.4 CysZ-like protein compare
Atu3632 -0.4 -1.2 hypothetical protein compare
Atu3013 -0.4 -1.3 hypothetical protein compare
Atu3706 -0.4 -2.6 D-3-phosphoglycerate dehydrogenase compare
Atu3075 -0.4 -2.3 TetR family transcriptional regulator compare
Atu5157 -0.4 -1.1 hypothetical protein compare
Atu3545 -0.4 -1.9 hypothetical protein compare
Atu5043 -0.4 -1.7 hypothetical protein compare
Atu4462 -0.4 -1.9 transcriptional regulator compare
Atu1793 -0.4 -2.0 phosphatidylcholine synthase compare
Atu2677 -0.4 -0.9 protein tyrosine phosphatase compare
Atu1327 -0.4 -1.0 NADH-ubiquinone oxidoreductase compare
Atu4879 -0.4 -1.7 hypothetical protein compare
Atu0602 -0.4 -2.3 glutamine synthetase compare
Atu2441 -0.4 -1.0 RNA methylase compare
Atu2041 -0.4 -0.9 acetyltransferase compare
Atu8115 -0.4 -2.7 Hypothetical Protein compare
Atu0516 -0.4 -1.4 chemotaxis receiver protein compare
Atu2293 -0.4 -1.0 hypothetical protein compare
Atu4873 -0.4 -2.3 TetR family transcriptional regulator compare
Atu8139 -0.4 -1.6 hypothetical protein compare
Atu3597 -0.4 -1.9 3-hydroxybutyryl-CoA dehydrogenase compare
Atu1110 -0.4 -0.8 cytosol aminopeptidase compare
Atu5106 -0.4 -1.4 DNA binding protein compare
Atu3497 -0.4 -1.0 hypothetical protein compare
Atu2237 -0.4 -1.1 cytochrome c1 compare
Atu2472 -0.4 -0.9 hypothetical protein compare
Atu0846 -0.4 -1.3 transcriptional regulator, MarR family compare


Specific Phenotypes

For 2 genes in this experiment

For stress Lithium chloride in Agrobacterium fabrum C58

For stress Lithium chloride across organisms