Experiment set5IT044 for Agrobacterium fabrum C58

Compare to:

R2A with Strontium chloride 750 mM

200 most important genes:

  gene name fitness t score description  
Atu8131 -6.0 -18.1 pH adaption potassium efflux system protein compare
Atu0510 -5.8 -14.1 pH adaption potassium efflux system protein compare
Atu3763 -5.8 -4.0 hypothetical protein compare
Atu0508 -4.5 -8.7 PH Adaption potassium efflux system conserved
Atu0017 -3.4 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4166 -3.1 -3.1 UDP-glucose 4-epimerase compare
Atu1030 -2.7 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1687 -2.7 -6.6 anthranilate phosphoribosyltransferase compare
Atu2289 -2.4 -12.0 anthranilate synthase component I and II compare
Atu0511 -2.4 -4.0 pH adaption potassium efflux system protein compare
Atu0399 -2.4 -8.9 dihydroorotase compare
Atu4618 -2.3 -13.2 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -2.3 -10.1 dTDP-D-glucose-4,6-dehydratase compare
Atu4613 -2.3 -14.3 glycosyltransferase compare
Atu4614 -2.1 -10.6 glycosyltransferase compare
Atu3353 -2.1 -12.4 mannose-1-phosphate guanylyltransferase compare
Atu2554 -2.1 -2.6 lysyl-tRNA synthetase compare
Atu2183 -2.1 -7.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4615 -2.0 -12.6 glucose-1-phosphate thymidylyltransferase compare
Atu4317 -1.9 -3.5 TetR family transcriptional regulator compare
Atu1688 -1.9 -4.6 indole-3-glycerol-phosphate synthase compare
Atu1810 -1.9 -2.3 hypothetical protein compare
Atu0331 -1.8 -4.2 sigma-54 modulation protein compare
Atu1163 -1.8 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4470 -1.6 -8.7 iron ABC transporter ATPase compare
Atu0486 -1.6 -3.8 dihydroorotate dehydrogenase compare
Atu4468 -1.6 -8.5 iron transport ABC transporter permease compare
Atu0434 -1.6 -4.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4471 -1.6 -7.2 ABC transporter substrate-binding protein compare
Atu0507 -1.6 -1.5 potassium efflux system protein compare
Atu0298 -1.5 -5.2 orotidine 5 compare
Atu1686 -1.5 -9.2 peptidyl-prolyl cis-trans isomerse D compare
Atu3754 -1.5 -2.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0400 -1.5 -4.3 orotate phosphoribosyltransferase compare
Atu1308 -1.5 -5.8 aspartate carbamoyl transferase catalytic subunit compare
Atu1542 -1.5 -5.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2787 -1.5 -1.7 hypothetical protein compare
Atu4616 -1.4 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu3008 -1.4 -1.4 hypothetical protein compare
Atu2692 -1.4 -4.6 intracellular septation protein compare
Atu0894 -1.4 -3.9 ABC transporter, membrane spanning protein compare
Atu1028 -1.4 -2.5 hypothetical protein compare
Atu4108 -1.4 -6.3 ribonuclease D compare
Atu1307 -1.3 -4.5 dihydroorotase compare
Atu2805 -1.3 -4.8 cobalamin synthesis protein compare
Atu8054 -1.3 -1.0 hypothetical protein compare
Atu4346 -1.3 -3.9 hypothetical protein compare
Atu2799 -1.2 -5.4 precorrin-6x reductase compare
Atu1891 -1.2 -4.1 cobalamin biosynthesis protein compare
Atu2802 -1.2 -4.8 precorrin-8X methylmutase compare
Atu2439 -1.2 -0.9 hypothetical protein compare
Atu2125 -1.1 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu2798 -1.1 -2.8 precorrin-6y methyltransferase compare
Atu2801 -1.1 -4.1 precorrin-2 C20 methyltransferase compare
Atu3311 -1.1 -9.2 phosphomannose isomerase compare
Atu3469 -1.1 -2.4 phosphoglyceromutase compare
Atu0977 -1.1 -3.8 serine protease DO-like protease compare
Atu2800 -1.1 -1.9 precorrin-3B C17-methyltransferase compare
Atu1219 -1.1 -1.2 hypothetical protein compare
Atu2807 -1.0 -5.3 cob(I)alamin adenosyltransferase compare
Atu1845 -1.0 -2.6 phosphoribosylformylglycinamidine synthase I compare
Atu1850 -1.0 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0895 -1.0 -3.1 ABC transporter, substrate binding protein compare
Atu1447 -1.0 -3.0 two component sensor kinase compare
Atu0777 -1.0 -1.1 hypothetical protein compare
Atu3014 -1.0 -2.5 hypothetical protein compare
Atu0043 -1.0 -2.0 imidazoleglycerol-phosphate dehydratase compare
Atu1075 -1.0 -4.4 amidophosphoribosyltransferase compare
Atu2809 -1.0 -5.0 cobalamin biosynthesis protein compare
Atu0041 -1.0 -1.4 glutamine amidotransferase compare
Atu4610 -1.0 -7.1 sugar nucleotide epimerase/dehydratase compare
Atu4469 -1.0 -2.2 iron ABC transporter permease compare
Atu0784 -1.0 -4.2 hypothetical protein compare
Atu1141 -1.0 -4.0 Phosphoribosylglycinamide synthetase compare
Atu1140 -1.0 -5.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2044 -1.0 -4.8 HFLC protein compare
Atu1364 -1.0 -3.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0647 -0.9 -3.6 phosphoribosylamine--glycine ligase compare
Atu0031 -0.9 -1.5 PTS system, IIA component compare
Atu3468 -0.9 -1.0 hypothetical protein compare
Atu1359 -0.9 -1.2 dnaK deletion suppressor protein compare
Atu2796 -0.9 -3.8 precorrin-4 C11-methyltransferase compare
Atu2804 -0.9 -4.6 cobaltochelatase subunit compare
Atu0876 -0.9 -1.6 superoxide dismutase compare
Atu3755 -0.9 -3.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0025 -0.9 -1.3 hypothetical protein compare
Atu2808 -0.9 -4.3 cobyric acid synthase compare
Atu1750 -0.9 -4.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu2793 -0.9 -2.9 cobyrinic acid a,c-diamide synthase compare
Atu1739 -0.8 -3.0 permease compare
Atu0660 -0.8 -4.8 hydrolase compare
Atu2803 -0.8 -3.4 Cobalamin biosynthesis associated protein compare
Atu0107 -0.8 -1.6 hypothetical protein compare
Atu2746 -0.8 -2.8 hypothetical protein compare
Atu0769 -0.8 -1.6 protoheme IX farnesyltransferase compare
Atu5163 -0.8 -1.9 type IV secretion protein AvhB2 compare
Atu1103 -0.8 -1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0039 -0.8 -1.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3001 -0.8 -1.8 hypothetical protein compare
Atu2650 -0.7 -5.7 glycerol-3-phosphate dehydrogenase compare
Atu2682 -0.7 -2.6 hypothetical protein compare
Atu2057 -0.7 -1.8 DNA helicase II compare
Atu0893 -0.7 -2.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1844 -0.7 -1.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2832 -0.7 -3.3 tRNA modification GTPase compare
Atu4890 -0.7 -1.6 IS426 transposase compare
Atu2772 -0.7 -4.3 Invasion protein A compare
Atu1760 -0.7 -1.2 hypothetical protein compare
Atu0976 -0.7 -1.7 cycL protein compare
Atu1354 -0.7 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1446 -0.7 -1.6 two component response regulator compare
Atu6045 -0.7 -1.4 replication protein C compare
Atu8184 -0.7 -2.4 hypothetical protein compare
Atu5125 -0.7 -2.7 GntR family transcriptional regulator compare
Atu1983 -0.7 -3.1 hypothetical protein compare
Atu3727 -0.7 -2.3 hypothetical protein compare
Atu2239 -0.7 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4217 -0.6 -0.9 TetR family transcriptional regulator compare
Atu8088 -0.6 -1.1 hypothetical protein compare
Atu1705 -0.6 -1.8 SEC-independent protein translocase protein compare
Atu1968 -0.6 -1.6 hypothetical protein compare
Atu0101 -0.6 -2.6 cytochrome c compare
Atu1573 -0.6 -1.3 hypothetical protein compare
Atu0981 -0.6 -4.4 glutamate-ammonia-ligase adenylyltransferase compare
Atu2040 -0.6 -2.4 phosphoserine phosphatase compare
Atu2633 -0.6 -1.3 RhtB family transporter compare
Atu1774 -0.6 -3.6 ABC transporter, substrate binding protein (peptide) compare
Atu1225 -0.6 -1.1 hypothetical protein compare
Atu2795 -0.6 -3.6 cobalamin biosynthetic protein compare
Atu8161 -0.6 -1.2 hypothetical protein compare
Atu2192 -0.6 -1.1 hypothetical protein compare
Atu2710 -0.6 -3.4 hypothetical protein compare
Atu0190 -0.6 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0029 -0.6 -3.3 S-adenosylhomocysteine hydrolase compare
Atu3707 -0.6 -2.3 phosphoserine aminotransferase compare
Atu2831 -0.6 -3.1 glucose inhibited division protein A compare
Atu3013 -0.6 -3.1 hypothetical protein compare
Atu5095 -0.6 -2.2 hypothetical protein compare
Atu1753 -0.6 -4.4 hypothetical protein compare
Atu3885 -0.6 -3.9 inositol monophosphatase compare
Atu0141 -0.6 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu3496 -0.6 -2.9 hypothetical protein compare
Atu8202 -0.6 -2.4 hypothetical protein compare
Atu0340 -0.6 -1.3 SAM dependent methyltransferase compare
Atu3593 -0.6 -4.0 hypothetical protein compare
Atu5160 -0.6 -1.3 transcriptional regulator protein compare
Atu2810 -0.5 -3.8 cobalamin biosynthetic protein compare
Atu3481 -0.5 -2.2 enoyl-CoA hydratase compare
Atu3017 -0.5 -0.9 phosphoglyceromutase compare
Atu8185 -0.5 -2.2 hypothetical protein compare
Atu4894 -0.5 -2.8 transposase compare
Atu1846 -0.5 -0.5 hypothetical protein compare
Atu1536 -0.5 -2.2 cytochrome C oxidase, FixO chain compare
Atu4608 -0.5 -4.4 hypothetical protein compare
Atu3015 -0.5 -2.3 hypothetical protein compare
Atu8082 -0.5 -0.8 hypothetical protein compare
Atu0272 -0.5 -2.2 transcriptional regulator, MarR family compare
Atu2238 -0.5 -2.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3510 -0.5 -2.1 amidohydrolase compare
Atu3712 -0.5 -0.8 hypothetical protein compare
Atu0346 -0.5 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0501 -0.5 -3.8 acyl-CoA dehydrogenase compare
Atu3160 -0.5 -2.2 hypothetical protein compare
Atu1592 -0.5 -1.9 hypothetical protein compare
Atu2045 -0.5 -3.1 HFLK protein compare
Atu4882 -0.5 -1.7 hypothetical protein compare
Atu4878 -0.5 -2.4 hypothetical protein compare
Atu2684 -0.5 -0.6 hypothetical protein compare
Atu2270 -0.5 -1.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu1529 -0.5 -2.8 nitrogen fixation protein FixH compare
Atu4148 -0.5 -1.6 UDP-glucuronic acid epimerase compare
Atu2379 -0.5 -3.4 phosphomannomutase compare
Atu2548 -0.5 -3.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2683 -0.5 -1.1 hypothetical protein compare
Atu2722 -0.5 -2.8 porin compare
Atu8191 -0.5 -1.2 hypothetical protein compare
Atu1077 -0.5 -1.1 DNA repair protein compare
Atu1021 -0.5 -1.5 outer membrane protein compare
Atu2616 -0.5 -3.4 hypothetical protein compare
Atu2073 -0.5 -1.9 membrane protein compare
Atu0920 -0.5 -1.8 hypothetical protein compare
Atu3400 -0.5 -1.8 hypothetical protein compare
Atu0188 -0.5 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0836 -0.5 -1.1 Glutathione-S-transferase compare
Atu0044 -0.5 -2.4 heat shock protein hslV compare
Atu2660 -0.5 -1.1 hypothetical protein compare
Atu5186 -0.5 -1.3 hypothetical protein compare
Atu3486 -0.5 -1.6 DeoR family transcriptional regulator compare
Atu0388 -0.5 -3.4 two component sensor kinase compare
Atu2209 -0.5 -1.7 pyrroline-5-carboxylate reductase compare
Atu2217 -0.5 -2.1 hypothetical protein compare
Atu1110 -0.5 -1.3 cytosol aminopeptidase compare
Atu3572 -0.5 -2.8 transcriptional regulator compare
Atu3032 -0.5 -0.9 hypothetical protein compare
Atu4773 -0.4 -1.1 two component response regulator compare
Atu6195 -0.4 -1.7 conserved hypothetical protein compare
Atu2655 -0.4 -3.2 hypothetical protein compare
Atu4880 -0.4 -3.0 AraC family transcriptional regulator compare
Atu4099 -0.4 -1.9 hypothetical protein compare
Atu1683 -0.4 -0.9 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress Strontium chloride in Agrobacterium fabrum C58

For stress Strontium chloride across organisms