Experiment set5IT041 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium m-arsenite 0.8 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Atu1492 -5.7 -5.2 transcriptional regulator, ArsR family compare
Atu1489 -5.6 -10.5 arsenical resistance protein conserved
Atu1491 -4.8 -9.1 sodium bile acid symporter family protein conserved
Atu4501 -4.2 -10.4 hypothetical protein compare
Atu3697 -3.6 -5.1 ATP-dependent protease LA 2 compare
Atu1285 -3.4 -9.2 metal dependent hydrolase compare
Atu1380 -3.0 -8.0 zinc metallopeptidase compare
Atu4199 -3.0 -9.6 TetR family transcriptional regulator compare
Atu3791 -2.9 -7.4 L-asparaginase compare
Atu0592 -2.9 -7.5 ABC transporter, membrane spanning protein compare
Atu1518 -2.8 -6.1 transcriptional regulator, Fur family compare
Atu3815 -2.7 -6.6 GntR family transcriptional regulator compare
Atu3179 -2.6 -9.8 ABC transporter permease compare
Atu0908 -2.6 -5.9 transcriptional regulator compare
Atu2489 -2.5 -9.3 hypothetical protein compare
Atu3180 -2.1 -7.6 ABC transporter permease compare
Atu0591 -2.0 -13.0 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1177 -2.0 -5.1 hypothetical protein compare
Atu1064 -2.0 -10.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3878 -2.0 -9.4 transcriptional regulator compare
Atu1544 -1.9 -9.2 hypothetical protein compare
Atu4373 -1.9 -8.4 LacI family transcriptional regulator compare
Atu0649 -1.9 -8.6 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu1526 -1.8 -7.2 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu0595 -1.8 -10.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu4114 -1.7 -8.4 dipeptide ABC transporter permease compare
Atu8147 -1.7 -10.4 hypothetical protein compare
Atu0593 -1.7 -8.3 ABC transporter, membrane spanning protein compare
Atu2766 -1.7 -13.0 NAD-glutamate dehydrogenase compare
Atu4117 -1.7 -5.5 dipeptide ABC transporter ATPase compare
Atu4743 -1.6 -5.7 LacI family transcriptional regulator compare
Atu4226 -1.6 -8.7 transcriptional regulator compare
Atu4451 -1.6 -10.0 mannitol 2-dehydrogenase compare
Atu3798 -1.6 -6.0 TetR family transcriptional regulator compare
Atu0070 -1.6 -6.8 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu4029 -1.6 -6.0 gluconolactonase compare
Atu3532 -1.5 -6.2 GntR family transcriptional regulator compare
Atu4426 -1.5 -9.0 adenine deaminase compare
Atu4112 -1.4 -6.4 proline dipeptidase compare
Atu0594 -1.4 -7.0 alpha-glucosidase compare
Atu4115 -1.4 -5.4 dipeptide ABC transporter permease compare
Atu5464 -1.4 -6.9 IclR family transcriptional regulator compare
Atu2714 -1.4 -6.3 ABC transporter, substrate binding protein (thiamine) compare
Atu2713 -1.4 -9.1 ABC transporter, membrane spanning protein (thiamine) compare
Atu4567 -1.4 -5.3 ROK family transcriptional regulator compare
Atu0779 -1.3 -5.8 peroxiredoxin compare
Atu4113 -1.3 -8.3 dipeptide ABC transporter substrate-binding protein compare
Atu2350 -1.2 -6.3 transcriptional regulator, LysR family compare
Atu3738 -1.2 -8.9 potassium/proton antiporter compare
Atu2712 -1.2 -5.4 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu4116 -1.2 -6.6 dipeptide ABC transporter ATPase compare
Atu3799 -1.2 -5.2 GntR family transcriptional regulator compare
Atu1680 -1.1 -5.3 peptidyl prolyl cis-trans isomerase compare
Atu3726 +1.0 6.4 flavin dependent oxidoreductase compare
Atu2276 +1.0 6.1 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu2424 +1.1 6.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu2425 +1.1 8.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu4157 +1.1 10.0 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
Atu4035 +1.2 7.3 two component response regulator compare
Atu3327 +1.2 7.7 succinoglycan exopolysaccharide synthesis protein compare
Atu1601 +1.2 8.2 oxygen-independent coproporphyrinogen III oxidase compare
Atu4034 +1.2 8.4 two component sensor kinase compare
Atu0995 +1.2 8.2 hypothetical protein compare
Atu0302 +1.2 9.8 tetrapyrrole methylase family protein compare
Atu1764 +1.3 9.1 methylenetetrahydrofolate reductase compare
Atu4030 +1.3 9.2 sugar ABC transporter permease compare
Atu4031 +1.3 9.9 sugar ABC transporter permease compare
Atu4032 +1.3 9.4 sugar ABC transporter ATPase compare
Atu4033 +1.3 8.7 sugar ABC transporter substrate-binding protein compare
Atu1788 +1.3 10.1 transcriptional regulator, GntR family compare
Atu4160 +1.4 8.0 RNA polymerase sigma factor compare
Atu4050 +1.4 6.2 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0008 +1.5 10.2 hypothetical protein compare
Atu4470 +1.6 8.0 iron ABC transporter ATPase compare
Atu4471 +1.8 14.3 ABC transporter substrate-binding protein compare
Atu2482 +1.8 14.5 HlyD family secretion protein compare
Atu0689 +1.9 11.2 ribosomal large subunit pseudouridine synthase B compare
Atu2480 +2.0 14.6 transcriptional regulator, LysR family compare
Atu2481 +2.0 14.3 lipase esterase compare
Atu8035 +2.1 6.8 hypothetical protein compare
Atu0328 +2.3 16.9 heat-inducible transcription repressor compare
Atu4078 +2.3 17.5 glycogen phosphorylase compare
Atu1444 +2.3 5.5 nitrogen regulation protein compare
Atu2442 +2.5 6.7 hypothetical protein compare
Atu2348 +2.9 19.7 sugar binding protein compare
Atu4077 +5.5 46.3 glycogen branching protein compare


Specific phenotypes for stress Sodium m-arsenite across organisms