Experiment set5IT039 for Agrobacterium fabrum C58

Compare to:

R2A with Cesium chloride 1.75 mM

200 most important genes:

  gene name fitness t score description  
Atu0434 -4.0 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1446 -3.4 -3.1 two component response regulator compare
Atu5430 -2.5 -1.9 hypothetical protein compare
Atu0017 -2.0 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2289 -2.0 -10.4 anthranilate synthase component I and II compare
Atu1308 -1.9 -5.8 aspartate carbamoyl transferase catalytic subunit compare
Atu0399 -1.9 -6.8 dihydroorotase compare
Atu0769 -1.9 -2.8 protoheme IX farnesyltransferase compare
Atu0298 -1.9 -5.9 orotidine 5 compare
Atu1307 -1.8 -6.0 dihydroorotase compare
Atu0039 -1.8 -2.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu0486 -1.8 -5.4 dihydroorotate dehydrogenase compare
Atu0400 -1.7 -5.1 orotate phosphoribosyltransferase compare
Atu1687 -1.6 -5.2 anthranilate phosphoribosyltransferase compare
Atu0346 -1.6 -2.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4317 -1.5 -3.0 TetR family transcriptional regulator compare
Atu0025 -1.4 -1.7 hypothetical protein compare
Atu0103 -1.4 -7.2 penicillin-binding protein compare
Atu2554 -1.3 -1.4 lysyl-tRNA synthetase compare
Atu1688 -1.3 -3.6 indole-3-glycerol-phosphate synthase compare
Atu0031 -1.3 -1.8 PTS system, IIA component compare
Atu1850 -1.2 -4.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0777 -1.2 -1.2 hypothetical protein compare
Atu1028 -1.2 -2.8 hypothetical protein compare
Atu2640 -1.2 -3.8 hypothetical protein compare
Atu2017 -1.1 -1.2 hypothetical protein compare
Atu3730 -1.1 -1.7 hypothetical protein compare
Atu2809 -1.1 -6.7 cobalamin biosynthesis protein compare
Atu2796 -1.1 -4.8 precorrin-4 C11-methyltransferase compare
Atu3469 -1.1 -1.7 phosphoglyceromutase compare
Atu4773 -1.1 -2.1 two component response regulator compare
Atu1686 -1.0 -6.5 peptidyl-prolyl cis-trans isomerse D compare
Atu2787 -1.0 -1.2 hypothetical protein compare
Atu2710 -1.0 -5.6 hypothetical protein compare
Atu3707 -1.0 -3.6 phosphoserine aminotransferase compare
Atu0184 -1.0 -1.8 glucokinase compare
Atu4897 -1.0 -1.6 hypothetical protein compare
Atu1714 -1.0 -1.7 exonuclease III compare
Atu1030 -1.0 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2801 -1.0 -2.6 precorrin-2 C20 methyltransferase compare
Atu2802 -0.9 -4.7 precorrin-8X methylmutase compare
Atu2798 -0.9 -3.1 precorrin-6y methyltransferase compare
Atu1542 -0.9 -3.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2073 -0.9 -2.2 membrane protein compare
Atu1844 -0.9 -2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu1141 -0.9 -5.4 Phosphoribosylglycinamide synthetase compare
Atu3754 -0.8 -2.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1075 -0.8 -3.8 amidophosphoribosyltransferase compare
Atu1184 -0.8 -2.8 hypothetical protein compare
Atu0976 -0.8 -2.4 cycL protein compare
Atu1588 -0.8 -5.5 homoserine dehydrogenase compare
Atu2804 -0.8 -4.8 cobaltochelatase subunit compare
Atu2807 -0.8 -4.1 cob(I)alamin adenosyltransferase compare
Atu2406 -0.8 -2.0 hypothetical protein compare
Atu1891 -0.8 -2.2 cobalamin biosynthesis protein compare
Atu3750 -0.8 -1.9 thiamine-phosphate pyrophosphorylase compare
Atu2799 -0.8 -2.8 precorrin-6x reductase compare
Atu2805 -0.8 -3.6 cobalamin synthesis protein compare
Atu2793 -0.8 -2.6 cobyrinic acid a,c-diamide synthase compare
Atu3727 -0.8 -3.3 hypothetical protein compare
Atu4053 -0.8 -1.3 succinoglycan biosynthesis protein compare
Atu0647 -0.8 -2.8 phosphoribosylamine--glycine ligase compare
Atu8087 -0.8 -1.0 putative peptidoglycan binding protein compare
Atu0886 -0.8 -1.4 hypothetical protein compare
Atu0361 -0.8 -2.0 transcriptional regulator compare
Atu3706 -0.7 -5.0 D-3-phosphoglycerate dehydrogenase compare
Atu2800 -0.7 -2.0 precorrin-3B C17-methyltransferase compare
Atu0101 -0.7 -2.0 cytochrome c compare
Atu1355 -0.7 -3.5 hypothetical protein compare
Atu0401 -0.7 -3.3 fructokinase compare
Atu5513 -0.7 -1.5 cold shock protein compare
Atu0535 -0.7 -3.0 hypothetical protein compare
Atu2368 -0.7 -1.2 hypothetical protein compare
Atu4108 -0.7 -3.8 ribonuclease D compare
Atu2795 -0.7 -4.6 cobalamin biosynthetic protein compare
Atu0062 -0.7 -3.8 transcriptional regulator, ROK family compare
Atu2808 -0.7 -4.0 cobyric acid synthase compare
Atu1302 -0.7 -2.7 hypothetical protein compare
Atu3036 -0.7 -2.7 dipeptide ABC transporter permease compare
Atu2650 -0.7 -4.3 glycerol-3-phosphate dehydrogenase compare
Atu2207 -0.7 -3.0 two component sensor kinase compare
Atu1140 -0.7 -2.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0029 -0.7 -2.7 S-adenosylhomocysteine hydrolase compare
Atu2199 -0.7 -4.8 permease compare
Atu8118 -0.7 -2.4 putative universal stress protein compare
Atu0977 -0.7 -3.7 serine protease DO-like protease compare
Atu0809 -0.6 -1.0 hypothetical protein compare
Atu3579 -0.6 -2.3 lactoylglutathione lyase compare
Atu2728 -0.6 -2.6 beta (1-->2) glucan export ATP-binding protein compare
Atu0185 -0.6 -2.4 methylglyoxal synthase compare
Atu0421 -0.6 -0.9 ABC transporter, membrane spanning protein compare
Atu0085 -0.6 -2.6 tRNA pseudouridine 55 synthase compare
Atu4616 -0.6 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu0322 -0.6 -3.5 enoyl CoA hydratase compare
Atu3481 -0.6 -2.6 enoyl-CoA hydratase compare
Atu1291 -0.6 -1.8 hypothetical protein compare
Atu2083 -0.6 -1.5 DNA repair protein RecN compare
Atu2803 -0.6 -2.6 Cobalamin biosynthesis associated protein compare
Atu3032 -0.6 -2.0 hypothetical protein compare
Atu1103 -0.6 -2.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3006 -0.6 -1.9 hypothetical protein compare
Atu3496 -0.6 -1.4 hypothetical protein compare
Atu0503 -0.6 -4.3 enoyl-CoA hydratase compare
Atu4075 -0.6 -3.0 glycogen synthase compare
Atu5125 -0.6 -2.5 GntR family transcriptional regulator compare
Atu3008 -0.6 -0.7 hypothetical protein compare
Atu0043 -0.6 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu3755 -0.6 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2140 -0.6 -2.0 hypothetical protein compare
Atu4166 -0.6 -1.5 UDP-glucose 4-epimerase compare
Atu0501 -0.5 -4.5 acyl-CoA dehydrogenase compare
Atu2036 -0.5 -4.0 acetolactate synthase III, large subunit compare
Atu3634 -0.5 -2.7 penicillin-binding protein dacf precursor compare
Atu0331 -0.5 -1.6 sigma-54 modulation protein compare
Atu2040 -0.5 -2.3 phosphoserine phosphatase compare
Atu0739 -0.5 -1.4 hypothetical protein compare
Atu5468 -0.5 -0.8 hypothetical protein compare
Atu1495 -0.5 -2.2 hypothetical protein compare
Atu1845 -0.5 -1.6 phosphoribosylformylglycinamidine synthase I compare
Atu4418 -0.5 -2.8 glutaryl-CoA dehydrogenase compare
Atu5540 -0.5 -0.6 hypothetical protein compare
Atu2832 -0.5 -2.0 tRNA modification GTPase compare
Atu4711 -0.5 -2.3 two component sensor kinase compare
Atu2267 -0.5 -2.1 hypothetical protein compare
Atu2464 -0.5 -1.9 formyltetrahydrofolate deformylase compare
Atu1110 -0.5 -1.9 cytosol aminopeptidase compare
Atu2122 -0.5 -2.7 lytic murein transglycosylase compare
Atu5106 -0.5 -2.1 DNA binding protein compare
Atu3466 -0.5 -1.3 ArsR family transcriptional regulator compare
Atu1874 -0.5 -1.0 RecA protein compare
Atu2555 -0.5 -1.2 L-lysine 2,3-aminomutase compare
Atu1620 -0.5 -3.5 triosephosphate isomerase compare
Atu3031 -0.5 -0.8 hypothetical protein compare
Atu1021 -0.5 -1.2 outer membrane protein compare
Atu1646 -0.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1739 -0.5 -2.0 permease compare
Atu0422 -0.5 -1.0 ABC transporter, membrane spanning protein compare
Atu3598 -0.5 -1.1 thiol:disulfide interchange protein compare
Atu3822 -0.5 -2.1 hypothetical protein compare
Atu0876 -0.5 -0.8 superoxide dismutase compare
Atu0431 -0.5 -1.6 apaG protein compare
Atu1364 -0.5 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2238 -0.5 -3.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3593 -0.5 -2.7 hypothetical protein compare
Atu2495 -0.5 -2.5 flavoprotein oxidoreductase compare
Atu2221 -0.5 -1.6 Lipid A biosynthesis protein compare
Atu3739 -0.5 -1.4 phosphoglycerate kinase compare
Atu2790 -0.5 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu3505 -0.5 -2.7 3-hydroxyisobutyryl-CoA hydrolase compare
Atu3486 -0.5 -1.6 DeoR family transcriptional regulator compare
Atu4050 -0.5 -0.9 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0894 -0.5 -1.3 ABC transporter, membrane spanning protein compare
Atu0726 -0.5 -3.7 ring hydroxylating dioxygenase, alpha-subunit compare
Atu1858 -0.5 -1.6 hypothetical protein compare
Atu0488 -0.5 -1.3 hypothetical protein compare
Atu0590 -0.5 -2.8 transcriptional regulator repressor compare
Atu2349 -0.5 -1.1 hypothetical protein compare
Atu5115 -0.4 -0.8 hypothetical protein compare
Atu2343 -0.4 -1.8 acetyltransferase compare
Atu4217 -0.4 -1.0 TetR family transcriptional regulator compare
Atu1645 -0.4 -3.0 ABC transporter, substrate binding protein compare
Atu4470 -0.4 -3.3 iron ABC transporter ATPase compare
Atu2127 -0.4 -2.6 L-carnitine dehydratase compare
Atu1904 -0.4 -1.7 transcriptional regulator compare
Atu0895 -0.4 -1.7 ABC transporter, substrate binding protein compare
Atu1182 -0.4 -0.7 hypothetical protein compare
Atu0592 -0.4 -2.2 ABC transporter, membrane spanning protein compare
Atu0237 -0.4 -1.6 hypothetical protein compare
Atu2137 -0.4 -2.3 hypothetical protein compare
Atu2733 -0.4 -2.0 hypothetical protein compare
Atu0205 -0.4 -3.3 methylmalonate-semialdehyde dehydrogenase compare
Atu4890 -0.4 -1.0 IS426 transposase compare
Atu1138 -0.4 -2.4 protease VII precursor compare
Atu1970 -0.4 -1.1 hypothetical protein compare
Atu0822 -0.4 -2.4 ABC transporter, membrane spanning protein compare
Atu0354 -0.4 -1.1 ferric uptake regulator compare
Atu0463 -0.4 -1.2 hypothetical protein compare
Atu2766 -0.4 -3.6 NAD-glutamate dehydrogenase compare
Atu0925 -0.4 -1.6 hypothetical protein compare
Atu2579 -0.4 -2.2 metal dependant beta lactamase protein compare
Atu4567 -0.4 -2.2 ROK family transcriptional regulator compare
Atu5043 -0.4 -1.6 hypothetical protein compare
Atu0565 -0.4 -1.4 hypothetical protein compare
Atu4199 -0.4 -2.4 TetR family transcriptional regulator compare
Atu2052 -0.4 -2.4 hypothetical protein compare
Atu2113 -0.4 -1.0 N-acetylmuramoyl-L-alanine amidase compare
Atu0598 -0.4 -2.4 phosphogluconate dehydratase compare
Atu0861 -0.4 -1.3 hypothetical protein compare
Atu1163 -0.4 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0689 -0.4 -3.1 ribosomal large subunit pseudouridine synthase B compare
Atu2237 -0.4 -1.7 cytochrome c1 compare
Atu0627 -0.4 -2.5 carboxymethylenebutenolidase compare
Atu2057 -0.4 -1.1 DNA helicase II compare
Atu4791 -0.4 -1.9 hypothetical protein compare
Atu3121 -0.4 -0.8 cold shock protein compare
Atu3120 -0.4 -0.4 hypothetical protein compare
Atu2249 -0.4 -0.6 hypothetical protein compare
Atu2764 -0.4 -2.9 hypothetical protein compare
Atu3588 -0.4 -1.3 DNA-3-methyladenine glycosidase II compare
Atu1177 -0.4 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Cesium chloride across organisms