Experiment set5IT034 for Agrobacterium fabrum C58

Compare to:

R2A with mercury (II) chloride 0.002 mM

200 most important genes:

  gene name fitness t score description  
Atu2289 -2.5 -12.8 anthranilate synthase component I and II compare
Atu0346 -2.4 -5.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1687 -2.2 -5.3 anthranilate phosphoribosyltransferase compare
Atu1688 -2.2 -5.1 indole-3-glycerol-phosphate synthase compare
Atu1307 -2.1 -7.8 dihydroorotase compare
Atu1254 -2.1 -1.9 transcriptional regulator, ArsR family compare
Atu0434 -2.1 -3.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0399 -2.0 -5.5 dihydroorotase compare
Atu0486 -1.9 -6.2 dihydroorotate dehydrogenase compare
Atu3469 -1.9 -2.5 phosphoglyceromutase compare
Atu0017 -1.7 -2.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0298 -1.5 -6.0 orotidine 5 compare
Atu1308 -1.4 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu0031 -1.4 -1.8 PTS system, IIA component compare
Atu2728 -1.4 -4.8 beta (1-->2) glucan export ATP-binding protein compare
Atu1686 -1.4 -8.5 peptidyl-prolyl cis-trans isomerse D compare
Atu2125 -1.3 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0777 -1.3 -1.2 hypothetical protein compare
Atu2113 -1.3 -2.9 N-acetylmuramoyl-L-alanine amidase compare
Atu1446 -1.3 -2.5 two component response regulator compare
Atu0039 -1.3 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu1028 -1.2 -2.2 hypothetical protein compare
Atu0400 -1.2 -3.6 orotate phosphoribosyltransferase compare
Atu1685 -1.2 -1.1 hypothetical protein compare
Atu3754 -1.2 -5.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1850 -1.1 -3.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0103 -1.1 -7.4 penicillin-binding protein compare
Atu3468 -1.1 -1.0 hypothetical protein compare
Atu0184 -1.1 -1.9 glucokinase compare
Atu1844 -1.1 -2.2 Phosphoribosylformylglycinamidine synthetase compare
Atu0040 -1.1 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1030 -1.0 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2710 -1.0 -6.0 hypothetical protein compare
Atu4317 -1.0 -2.4 TetR family transcriptional regulator compare
Atu0647 -1.0 -5.4 phosphoribosylamine--glycine ligase compare
Atu3739 -1.0 -2.2 phosphoglycerate kinase compare
Atu2040 -1.0 -3.1 phosphoserine phosphatase compare
Atu1141 -1.0 -5.3 Phosphoribosylglycinamide synthetase compare
Atu2368 -1.0 -1.4 hypothetical protein compare
Atu0043 -0.9 -2.0 imidazoleglycerol-phosphate dehydratase compare
Atu2803 -0.9 -3.2 Cobalamin biosynthesis associated protein compare
Atu4773 -0.9 -1.9 two component response regulator compare
Atu0185 -0.9 -4.3 methylglyoxal synthase compare
Atu3121 -0.9 -1.5 cold shock protein compare
Atu8138 -0.9 -1.6 hypothetical protein compare
Atu1542 -0.9 -3.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2793 -0.9 -3.6 cobyrinic acid a,c-diamide synthase compare
Atu4616 -0.9 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu0977 -0.9 -3.3 serine protease DO-like protease compare
Atu1845 -0.9 -1.6 phosphoribosylformylglycinamidine synthase I compare
Atu1588 -0.8 -4.3 homoserine dehydrogenase compare
Atu2554 -0.8 -1.7 lysyl-tRNA synthetase compare
Atu0225 -0.8 -0.9 hypothetical protein compare
Atu2809 -0.8 -4.3 cobalamin biosynthesis protein compare
Atu2796 -0.8 -4.2 precorrin-4 C11-methyltransferase compare
Atu2286 -0.8 -1.3 hypothetical protein compare
Atu3466 -0.8 -2.6 ArsR family transcriptional regulator compare
Atu0769 -0.8 -1.1 protoheme IX farnesyltransferase compare
Atu0535 -0.8 -2.4 hypothetical protein compare
Atu0972 -0.7 -3.0 lipA protein compare
Atu0115 -0.7 -0.9 hypothetical protein compare
Atu2808 -0.7 -3.8 cobyric acid synthase compare
Atu1714 -0.7 -1.3 exonuclease III compare
Atu0471 -0.7 -2.9 hypothetical protein compare
Atu3706 -0.7 -3.8 D-3-phosphoglycerate dehydrogenase compare
Atu0101 -0.7 -2.5 cytochrome c compare
Atu3668 -0.7 -3.1 siderophore biosynthesis protein compare
Atu4418 -0.7 -3.1 glutaryl-CoA dehydrogenase compare
Atu3755 -0.7 -2.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1163 -0.7 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1287 -0.7 -1.9 hypothetical protein compare
Atu2805 -0.7 -2.3 cobalamin synthesis protein compare
Atu2802 -0.7 -3.2 precorrin-8X methylmutase compare
Atu2801 -0.7 -2.8 precorrin-2 C20 methyltransferase compare
Atu0943 -0.7 -1.6 hypothetical protein compare
Atu0331 -0.7 -1.4 sigma-54 modulation protein compare
Atu2799 -0.7 -2.9 precorrin-6x reductase compare
Atu5540 -0.7 -0.7 hypothetical protein compare
Atu0846 -0.7 -3.2 transcriptional regulator, MarR family compare
Atu3634 -0.7 -2.9 penicillin-binding protein dacf precursor compare
Atu2650 -0.7 -4.6 glycerol-3-phosphate dehydrogenase compare
Atu0894 -0.7 -1.4 ABC transporter, membrane spanning protein compare
Atu1232 -0.7 -1.6 hypothetical protein compare
Atu4053 -0.6 -1.2 succinoglycan biosynthesis protein compare
Atu1566 -0.6 -0.9 hypothetical protein compare
Atu0361 -0.6 -1.8 transcriptional regulator compare
Atu2450 -0.6 -2.3 hypothetical protein compare
Atu0606 -0.6 -1.2 hypothetical protein compare
Atu0726 -0.6 -4.0 ring hydroxylating dioxygenase, alpha-subunit compare
Atu3727 -0.6 -1.9 hypothetical protein compare
Atu1629 -0.6 -0.9 transcriptional regulator, ArsR family compare
Atu0029 -0.6 -2.2 S-adenosylhomocysteine hydrolase compare
Atu1064 -0.6 -3.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1140 -0.6 -2.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2795 -0.6 -2.9 cobalamin biosynthetic protein compare
Atu3593 -0.6 -3.3 hypothetical protein compare
Atu0038 -0.6 -3.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu4075 -0.6 -3.1 glycogen synthase compare
Atu1075 -0.6 -3.6 amidophosphoribosyltransferase compare
Atu2807 -0.6 -2.6 cob(I)alamin adenosyltransferase compare
Atu1980 -0.6 -1.9 hypothetical protein compare
Atu4161 -0.6 -0.8 hypothetical protein compare
Atu2800 -0.6 -2.4 precorrin-3B C17-methyltransferase compare
Atu4890 -0.6 -1.2 IS426 transposase compare
Atu5088 -0.6 -1.1 hypothetical protein compare
Atu4711 -0.6 -3.2 two component sensor kinase compare
Atu3518 -0.5 -3.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3353 -0.5 -4.2 mannose-1-phosphate guanylyltransferase compare
Atu2207 -0.5 -2.0 two component sensor kinase compare
Atu2798 -0.5 -2.3 precorrin-6y methyltransferase compare
Atu2057 -0.5 -1.4 DNA helicase II compare
Atu5125 -0.5 -2.9 GntR family transcriptional regulator compare
Atu3009 -0.5 -0.7 exopolysaccharide production protein compare
Atu2238 -0.5 -2.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1364 -0.5 -3.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1339 -0.5 -2.3 ribonuclease E compare
Atu2205 -0.5 -1.7 transcriptional regulator, MarR family compare
Atu8032 -0.5 -1.1 hypothetical protein compare
Atu0727 -0.5 -3.1 ferredoxin I compare
Atu0973 -0.5 -2.7 cycH protein compare
Atu3578 -0.5 -2.5 glycerol-3-phosphate dehydrogenase compare
Atu3712 -0.5 -0.9 hypothetical protein compare
Atu0030 -0.5 -0.9 phosphocarrier protein HPr compare
Atu1620 -0.5 -3.6 triosephosphate isomerase compare
Atu1225 -0.5 -0.8 hypothetical protein compare
Atu6157 -0.5 -2.6 conserved hypothetical protein compare
Atu2464 -0.5 -1.3 formyltetrahydrofolate deformylase compare
Atu1774 -0.5 -2.8 ABC transporter, substrate binding protein (peptide) compare
Atu1739 -0.5 -2.2 permease compare
Atu0419 -0.5 -1.1 two component sensor kinase compare
Atu1741 -0.5 -2.2 hypothetical protein compare
Atu1359 -0.5 -0.7 dnaK deletion suppressor protein compare
Atu4702 -0.5 -2.4 GntR family transcriptional regulator compare
Atu2804 -0.5 -3.6 cobaltochelatase subunit compare
Atu4567 -0.5 -2.6 ROK family transcriptional regulator compare
Atu2827 -0.5 -2.0 hypothetical protein compare
Atu4342 -0.5 -2.0 hypothetical protein compare
Atu3126 -0.5 -1.8 hypothetical protein compare
Atu3095 -0.5 -1.7 hypothetical protein compare
Atu1467 -0.5 -1.3 hypothetical protein compare
Atu0723 -0.5 -0.7 FAD dependent oxidoreductase compare
Atu0598 -0.5 -1.9 phosphogluconate dehydratase compare
Atu1468 -0.5 -2.3 hypothetical protein compare
Atu4869 -0.5 -1.6 hypothetical protein compare
Atu1475 -0.5 -1.9 hypothetical protein compare
Atu3289 -0.5 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu0983 -0.5 -1.2 hypothetical protein compare
Atu2787 -0.5 -0.7 hypothetical protein compare
Atu2021 -0.5 -2.5 transcriptional regulator, AraC family compare
Atu2237 -0.5 -2.3 cytochrome c1 compare
Atu4094 -0.5 -1.7 hypothetical protein compare
Atu2041 -0.5 -1.2 acetyltransferase compare
Atu2640 -0.5 -1.5 hypothetical protein compare
Atu0953 -0.5 -0.7 hypothetical protein compare
Atu0322 -0.5 -1.8 enoyl CoA hydratase compare
Atu0062 -0.5 -2.3 transcriptional regulator, ROK family compare
Atu0503 -0.5 -3.7 enoyl-CoA hydratase compare
Atu1634 -0.5 -0.7 hypothetical protein compare
Atu4468 -0.5 -2.7 iron transport ABC transporter permease compare
Atu3579 -0.4 -1.8 lactoylglutathione lyase compare
Atu5075 -0.4 -2.2 GntR family transcriptional regulator compare
Atu3910 -0.4 -1.4 LamB/YcsF family protein compare
Atu0280 -0.4 -0.9 hypothetical protein compare
Atu2025 -0.4 -2.0 transcriptional regulator compare
Atu3912 -0.4 -3.0 hypothetical protein compare
Atu1464 -0.4 -2.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu3387 -0.4 -1.5 sigma factor compare
Atu5160 -0.4 -1.1 transcriptional regulator protein compare
Atu1642 -0.4 -1.1 hypothetical protein compare
Atu1701 -0.4 -1.0 protein-L-isoaspartate O-methyltransferase compare
Atu6163 -0.4 -2.4 hypothetical protein compare
Atu8180 -0.4 -1.9 hypothetical protein compare
Atu0718 -0.4 -1.4 hypothetical protein compare
Atu0824 -0.4 -0.6 hypothetical protein compare
Atu4446 -0.4 -2.8 hypothetical protein compare
Atu2073 -0.4 -1.5 membrane protein compare
Atu1646 -0.4 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu2439 -0.4 -0.5 hypothetical protein compare
Atu2662 -0.4 -0.8 acetyltransferase compare
Atu0048 -0.4 -2.8 hypothetical protein compare
Atu2239 -0.4 -1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1676 -0.4 -2.6 para-aminobenzoate synthase component I compare
Atu0897 -0.4 -3.1 protease II compare
Atu2789 -0.4 -2.0 hypothetical protein compare
Atu2083 -0.4 -1.6 DNA repair protein RecN compare
Atu3492 -0.4 -2.0 sugar kinase compare
Atu3478 -0.4 -2.4 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu0904 -0.4 -1.2 hypothetical protein compare
Atu4214 -0.4 -1.3 cold shock protein compare
Atu6138 -0.4 -1.9 Repressor of the acc and arc operons compare
Atu4451 -0.4 -3.1 mannitol 2-dehydrogenase compare
Atu3144 -0.4 -2.0 GntR family transcriptional regulator compare
Atu1021 -0.4 -1.0 outer membrane protein compare
Atu0689 -0.4 -2.7 ribosomal large subunit pseudouridine synthase B compare
Atu1667 -0.4 -0.8 hypothetical protein compare
Atu3911 -0.4 -1.8 hypothetical protein compare
Atu2794 -0.4 -1.5 uroporphyrin-III C-methyltransferase compare
Atu1777 -0.4 -1.9 hypothetical protein compare
Atu4470 -0.4 -2.2 iron ABC transporter ATPase compare
Atu4738 -0.4 -1.8 chloramphenicol acetyltransferase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress mercury (II) chloride across organisms