Experiment set5IT032 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium bromate 5 mM

200 most important genes:

  gene name fitness t score description  
Atu3598 -2.6 -2.4 thiol:disulfide interchange protein compare
Atu5540 -2.3 -1.6 hypothetical protein compare
Atu0434 -1.9 -4.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3469 -1.9 -2.8 phosphoglyceromutase compare
Atu1163 -1.9 -2.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3739 -1.9 -3.0 phosphoglycerate kinase compare
Atu0017 -1.8 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2684 -1.8 -1.9 hypothetical protein compare
Atu2289 -1.7 -10.9 anthranilate synthase component I and II compare
Atu0598 -1.7 -9.7 phosphogluconate dehydratase compare
Atu0399 -1.6 -6.6 dihydroorotase compare
Atu2125 -1.6 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0040 -1.6 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0486 -1.6 -5.6 dihydroorotate dehydrogenase compare
Atu1687 -1.6 -4.7 anthranilate phosphoribosyltransferase compare
Atu1688 -1.5 -3.3 indole-3-glycerol-phosphate synthase compare
Atu2740 -1.5 -4.8 transcriptional regulator, GntR family compare
Atu4317 -1.5 -3.7 TetR family transcriptional regulator compare
Atu0400 -1.5 -3.8 orotate phosphoribosyltransferase compare
Atu0184 -1.4 -2.4 glucokinase compare
Atu2113 -1.4 -2.9 N-acetylmuramoyl-L-alanine amidase compare
Atu1446 -1.3 -2.3 two component response regulator compare
Atu0298 -1.3 -6.3 orotidine 5 compare
Atu0103 -1.3 -7.4 penicillin-binding protein compare
Atu0876 -1.3 -1.1 superoxide dismutase compare
Atu1685 -1.2 -1.2 hypothetical protein compare
Atu2073 -1.2 -3.7 membrane protein compare
Atu0953 -1.2 -1.7 hypothetical protein compare
Atu2504 -1.2 -5.4 transcriptional regulator, GntR family compare
Atu2801 -1.2 -3.8 precorrin-2 C20 methyltransferase compare
Atu1634 -1.1 -2.1 hypothetical protein compare
Atu2710 -1.1 -5.7 hypothetical protein compare
Atu1028 -1.0 -2.7 hypothetical protein compare
Atu1307 -1.0 -2.9 dihydroorotase compare
Atu1846 -1.0 -1.2 hypothetical protein compare
Atu2798 -1.0 -4.2 precorrin-6y methyltransferase compare
Atu2803 -1.0 -3.4 Cobalamin biosynthesis associated protein compare
Atu0025 -1.0 -1.9 hypothetical protein compare
Atu5470 -0.9 -1.0 hypothetical protein compare
Atu4108 -0.9 -4.5 ribonuclease D compare
Atu1308 -0.9 -3.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1891 -0.9 -2.7 cobalamin biosynthesis protein compare
Atu3532 -0.9 -4.2 GntR family transcriptional regulator compare
Atu4617 -0.9 -5.5 dTDP-D-glucose-4,6-dehydratase compare
Atu3353 -0.9 -6.1 mannose-1-phosphate guanylyltransferase compare
Atu3750 -0.9 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu2802 -0.9 -5.6 precorrin-8X methylmutase compare
Atu0031 -0.9 -1.5 PTS system, IIA component compare
Atu0925 -0.9 -1.8 hypothetical protein compare
Atu0346 -0.9 -3.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3481 -0.8 -3.1 enoyl-CoA hydratase compare
Atu1588 -0.8 -4.4 homoserine dehydrogenase compare
Atu1490 -0.8 -2.2 arsenate reductase compare
Atu1182 -0.8 -2.1 hypothetical protein compare
Atu0357 -0.8 -4.1 phosphate starvation inducible protein compare
Atu1110 -0.8 -1.6 cytosol aminopeptidase compare
Atu2805 -0.8 -3.5 cobalamin synthesis protein compare
Atu0189 -0.8 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2379 -0.8 -4.9 phosphomannomutase compare
Atu1075 -0.8 -4.3 amidophosphoribosyltransferase compare
Atu6098 -0.8 -0.6 transcriptional regulator, HTH family compare
Atu0030 -0.8 -1.3 phosphocarrier protein HPr compare
Atu0647 -0.8 -3.5 phosphoribosylamine--glycine ligase compare
Atu2809 -0.8 -4.8 cobalamin biosynthesis protein compare
Atu0726 -0.8 -4.8 ring hydroxylating dioxygenase, alpha-subunit compare
Atu2640 -0.8 -3.0 hypothetical protein compare
Atu0211 -0.8 -4.4 hypothetical protein compare
Atu3579 -0.7 -3.0 lactoylglutathione lyase compare
Atu2808 -0.7 -3.7 cobyric acid synthase compare
Atu1021 -0.7 -2.3 outer membrane protein compare
Atu4614 -0.7 -4.5 glycosyltransferase compare
Atu1359 -0.7 -1.1 dnaK deletion suppressor protein compare
Atu4613 -0.7 -6.0 glycosyltransferase compare
Atu0322 -0.7 -2.8 enoyl CoA hydratase compare
Atu0062 -0.7 -4.0 transcriptional regulator, ROK family compare
Atu4618 -0.7 -5.5 dTDP-rhamnose-3,5-epimerase compare
Atu0331 -0.7 -1.8 sigma-54 modulation protein compare
Atu3311 -0.7 -5.7 phosphomannose isomerase compare
Atu2728 -0.7 -3.0 beta (1-->2) glucan export ATP-binding protein compare
Atu4615 -0.7 -4.7 glucose-1-phosphate thymidylyltransferase compare
Atu2804 -0.7 -4.8 cobaltochelatase subunit compare
Atu0225 -0.7 -0.9 hypothetical protein compare
Atu2650 -0.7 -4.4 glycerol-3-phosphate dehydrogenase compare
Atu0097 -0.7 -2.7 hypothetical protein compare
Atu1902 -0.7 -3.4 transketolase compare
Atu0698 -0.7 -3.0 hypothetical protein compare
Atu2799 -0.7 -2.1 precorrin-6x reductase compare
Atu1062 -0.7 -1.6 phosphatidylserine synthase compare
Atu3008 -0.7 -0.8 hypothetical protein compare
Atu0908 -0.7 -2.5 transcriptional regulator compare
Atu5163 -0.7 -1.1 type IV secretion protein AvhB2 compare
Atu2183 -0.7 -3.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4166 -0.6 -1.7 UDP-glucose 4-epimerase compare
Atu1542 -0.6 -3.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1445 -0.6 -2.5 two component sensor kinase compare
Atu0727 -0.6 -4.3 ferredoxin I compare
Atu2832 -0.6 -2.2 tRNA modification GTPase compare
Atu5164 -0.6 -0.7 type IV secretion protein AvhB3 compare
Atu1140 -0.6 -1.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0769 -0.6 -0.9 protoheme IX farnesyltransferase compare
Atu0501 -0.6 -4.5 acyl-CoA dehydrogenase compare
Atu1141 -0.6 -3.3 Phosphoribosylglycinamide synthetase compare
Atu0152 -0.6 -1.4 hypothetical protein compare
Atu1606 -0.6 -2.2 methionine aminopeptidase compare
Atu1686 -0.6 -4.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0463 -0.6 -2.2 hypothetical protein compare
Atu3506 -0.6 -2.0 hypothetical protein compare
Atu2777 -0.6 -3.7 hypothetical protein compare
Atu3474 -0.6 -3.2 acyl-CoA dehydrogenase compare
Atu4616 -0.6 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu0977 -0.6 -1.8 serine protease DO-like protease compare
Atu1705 -0.6 -2.3 SEC-independent protein translocase protein compare
Atu0190 -0.6 -3.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4897 -0.6 -1.2 hypothetical protein compare
Atu4610 -0.6 -4.6 sugar nucleotide epimerase/dehydratase compare
Atu8118 -0.6 -2.8 putative universal stress protein compare
Atu0718 -0.6 -2.3 hypothetical protein compare
Atu3505 -0.6 -3.7 3-hydroxyisobutyryl-CoA hydrolase compare
Atu3754 -0.6 -2.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3472 -0.6 -2.0 2-oxoisovalerate dehydrogenase subunit beta compare
Atu2380 -0.6 -1.8 hypothetical protein compare
Atu0125 -0.6 -3.3 peptide methionine sulfoxide reductase compare
Atu3480 -0.6 -3.2 hydroxymethylglutaryl-CoA lyase compare
Atu2067 -0.6 -0.6 hypothetical protein compare
Atu2040 -0.6 -2.2 phosphoserine phosphatase compare
Atu6106 -0.6 -1.4 conserved hypothetical protein compare
Atu4075 -0.6 -3.2 glycogen synthase compare
Atu2140 -0.6 -1.6 hypothetical protein compare
Atu4609 -0.6 -4.1 glycosyltransferase compare
Atu2821 -0.6 -2.0 transcriptional regulator, GntR family compare
Atu5107 -0.6 -2.1 hypothetical protein compare
Atu1435 -0.6 -2.1 hypothetical protein compare
Atu1529 -0.6 -2.6 nitrogen fixation protein FixH compare
Atu4608 -0.6 -4.1 hypothetical protein compare
Atu6153 -0.5 -1.8 conserved hypothetical protein compare
Atu2237 -0.5 -1.8 cytochrome c1 compare
Atu2795 -0.5 -3.3 cobalamin biosynthetic protein compare
Atu1422 -0.5 -3.3 transcriptional regulator, MarR family compare
Atu4599 -0.5 -3.1 IclR family transcriptional regulator compare
Atu0419 -0.5 -1.4 two component sensor kinase compare
Atu0185 -0.5 -2.1 methylglyoxal synthase compare
Atu2034 -0.5 -2.2 transcriptional regulator, ArsR family compare
Atu1739 -0.5 -2.4 permease compare
Atu1074 -0.5 -2.9 NAD/NADP dependent oxidoreductase compare
Atu5186 -0.5 -1.4 hypothetical protein compare
Atu3014 -0.5 -1.5 hypothetical protein compare
Atu1518 -0.5 -2.5 transcriptional regulator, Fur family compare
Atu1495 -0.5 -1.7 hypothetical protein compare
Atu1439 -0.5 -1.2 hypothetical protein compare
Atu0048 -0.5 -3.7 hypothetical protein compare
Atu1774 -0.5 -3.3 ABC transporter, substrate binding protein (peptide) compare
Atu2347 -0.5 -3.1 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu1177 -0.5 -2.3 hypothetical protein compare
Atu1254 -0.5 -1.2 transcriptional regulator, ArsR family compare
Atu4437 -0.5 -1.8 LysR family transcriptional regulator compare
Atu4093 -0.5 -1.4 hypothetical protein compare
Atu0039 -0.5 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu4451 -0.5 -3.3 mannitol 2-dehydrogenase compare
Atu2807 -0.5 -2.0 cob(I)alamin adenosyltransferase compare
Atu2565 -0.5 -3.0 hypothetical protein compare
Atu1327 -0.5 -1.6 NADH-ubiquinone oxidoreductase compare
Atu2831 -0.5 -2.5 glucose inhibited division protein A compare
Atu0971 -0.5 -2.2 two component sensor kinase compare
Atu1620 -0.5 -3.5 triosephosphate isomerase compare
Atu3580 -0.5 -3.8 methylmalonyl-CoA mutase compare
Atu0401 -0.5 -2.5 fructokinase compare
Atu3009 -0.5 -0.4 exopolysaccharide production protein compare
Atu2348 -0.5 -2.6 sugar binding protein compare
Atu3473 -0.5 -2.9 2-oxoisovalerate dehydrogenase subunit alpha compare
Atu0029 -0.5 -2.0 S-adenosylhomocysteine hydrolase compare
Atu0687 -0.5 -1.0 hypothetical protein compare
Atu1980 -0.5 -1.3 hypothetical protein compare
Atu2349 -0.5 -1.2 hypothetical protein compare
Atu8184 -0.5 -2.4 hypothetical protein compare
Atu1503 -0.5 -0.7 hypothetical protein compare
Atu1638 -0.5 -2.9 hypothetical protein compare
Atu5142 -0.5 -0.9 hypothetical protein compare
Atu2238 -0.5 -2.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0051 -0.5 -1.9 two component sensor kinase compare
Atu0503 -0.5 -4.1 enoyl-CoA hydratase compare
Atu5148 -0.5 -2.1 hypothetical protein compare
Atu1573 -0.5 -1.0 hypothetical protein compare
Atu2620 -0.5 -0.9 hypothetical protein compare
Atu0837 -0.4 -3.0 transcriptional regulator, MarR family compare
Atu0050 -0.4 -1.8 two component response regulator compare
Atu4887 -0.4 -1.7 hypothetical protein compare
Atu4217 -0.4 -1.1 TetR family transcriptional regulator compare
Atu2036 -0.4 -3.4 acetolactate synthase III, large subunit compare
Atu0272 -0.4 -1.8 transcriptional regulator, MarR family compare
Atu2793 -0.4 -1.9 cobyrinic acid a,c-diamide synthase compare
Atu1464 -0.4 -1.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu6186 -0.4 -1.5 virA/G regulated protein compare
Atu2290 -0.4 -2.2 probable acetyltransferase compare
Atu2790 -0.4 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu4232 -0.4 -2.0 GntR family transcriptional regulator compare
Atu4711 -0.4 -2.6 two component sensor kinase compare
Atu2766 -0.4 -3.6 NAD-glutamate dehydrogenase compare
Atu0926 -0.4 -1.5 hypothetical protein compare
Atu3471 -0.4 -3.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
Atu1844 -0.4 -0.8 Phosphoribosylformylglycinamidine synthetase compare


Specific Phenotypes

For 6 genes in this experiment

For stress Sodium bromate in Agrobacterium fabrum C58

For stress Sodium bromate across organisms