Experiment set5IT030 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium Chlorite 0.2 mM

200 most important genes:

  gene name fitness t score description  
Atu0434 -3.4 -4.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4897 -3.0 -3.0 hypothetical protein compare
Atu3469 -2.2 -3.3 phosphoglyceromutase compare
Atu1688 -2.2 -4.9 indole-3-glycerol-phosphate synthase compare
Atu0017 -2.2 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu6036 -2.0 -1.8 entry-exclusion protein compare
Atu1844 -1.9 -3.9 Phosphoribosylformylglycinamidine synthetase compare
Atu0184 -1.9 -2.7 glucokinase compare
Atu1359 -1.9 -1.7 dnaK deletion suppressor protein compare
Atu1687 -1.9 -5.4 anthranilate phosphoribosyltransferase compare
Atu0103 -1.7 -8.8 penicillin-binding protein compare
Atu0399 -1.7 -5.6 dihydroorotase compare
Atu2289 -1.6 -8.7 anthranilate synthase component I and II compare
Atu0486 -1.6 -5.9 dihydroorotate dehydrogenase compare
Atu0598 -1.4 -5.7 phosphogluconate dehydratase compare
Atu3754 -1.4 -8.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1850 -1.3 -2.0 phosphoribosylformylglycinamidine synthetase II compare
Atu1570 -1.3 -1.3 hypothetical protein compare
Atu1686 -1.3 -7.5 peptidyl-prolyl cis-trans isomerse D compare
Atu0346 -1.2 -4.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2349 -1.2 -2.4 hypothetical protein compare
Atu3623 -1.2 -3.8 DnaJ family molecular chaperone compare
Atu1075 -1.1 -4.2 amidophosphoribosyltransferase compare
Atu1254 -1.1 -1.9 transcriptional regulator, ArsR family compare
Atu1141 -1.0 -4.9 Phosphoribosylglycinamide synthetase compare
Atu0400 -1.0 -2.6 orotate phosphoribosyltransferase compare
Atu3750 -1.0 -2.7 thiamine-phosphate pyrophosphorylase compare
Atu0298 -1.0 -4.2 orotidine 5 compare
Atu0920 -1.0 -3.0 hypothetical protein compare
Atu2710 -1.0 -4.1 hypothetical protein compare
Atu2348 -0.9 -5.1 sugar binding protein compare
Atu3755 -0.9 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1028 -0.9 -1.8 hypothetical protein compare
Atu4072 -0.9 -1.5 nodulation protein N compare
Atu1801 -0.9 -1.2 hypothetical protein compare
Atu2683 -0.9 -1.7 hypothetical protein compare
Atu4093 -0.9 -3.1 hypothetical protein compare
Atu0097 -0.9 -3.8 hypothetical protein compare
Atu1327 -0.9 -3.0 NADH-ubiquinone oxidoreductase compare
Atu0050 -0.8 -4.1 two component response regulator compare
Atu0051 -0.8 -3.4 two component sensor kinase compare
Atu2127 -0.8 -4.1 L-carnitine dehydratase compare
Atu1845 -0.8 -3.4 phosphoribosylformylglycinamidine synthase I compare
Atu0723 -0.8 -1.6 FAD dependent oxidoreductase compare
Atu2347 -0.8 -4.2 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu2346 -0.8 -5.6 ABC transporter, membrane spanning protein (sugar) compare
Atu4418 -0.8 -3.6 glutaryl-CoA dehydrogenase compare
Atu8176 -0.8 -1.6 hypothetical protein compare
Atu5427 -0.8 -1.9 hypothetical protein compare
Atu0876 -0.8 -1.4 superoxide dismutase compare
Atu0795 -0.8 -1.5 hypothetical protein compare
Atu1364 -0.8 -3.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1307 -0.8 -2.9 dihydroorotase compare
Atu4317 -0.8 -2.4 TetR family transcriptional regulator compare
Atu1354 -0.7 -1.0 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2439 -0.7 -0.9 hypothetical protein compare
Atu3486 -0.7 -2.1 DeoR family transcriptional regulator compare
Atu1127 -0.7 -1.3 molybdopterin converting factor small subunit compare
Atu4075 -0.7 -3.7 glycogen synthase compare
Atu4108 -0.7 -4.1 ribonuclease D compare
Atu0908 -0.7 -2.3 transcriptional regulator compare
Atu4882 -0.7 -1.6 hypothetical protein compare
Atu5164 -0.7 -0.7 type IV secretion protein AvhB3 compare
Atu5470 -0.7 -0.7 hypothetical protein compare
Atu0142 -0.7 -1.8 cytochrome o ubiquinol oxidase subunit II compare
Atu0647 -0.7 -3.2 phosphoribosylamine--glycine ligase compare
Atu0382 -0.7 -1.7 hypothetical protein compare
Atu2548 -0.7 -4.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3017 -0.7 -0.9 phosphoglyceromutase compare
Atu4890 -0.7 -1.4 IS426 transposase compare
Atu0592 -0.7 -3.0 ABC transporter, membrane spanning protein compare
Atu1077 -0.7 -2.2 DNA repair protein compare
Atu0421 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu2504 -0.6 -3.9 transcriptional regulator, GntR family compare
Atu1140 -0.6 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2406 -0.6 -1.4 hypothetical protein compare
Atu2073 -0.6 -1.8 membrane protein compare
Atu2728 -0.6 -2.5 beta (1-->2) glucan export ATP-binding protein compare
Atu1518 -0.6 -2.1 transcriptional regulator, Fur family compare
Atu2685 -0.6 -4.1 aconitate hydratase compare
Atu0269 -0.6 -2.2 exodeoxyribonuclease VII large subunit compare
Atu1588 -0.6 -4.5 homoserine dehydrogenase compare
Atu2187 -0.6 -2.8 transcriptional regulator, ArsR family compare
Atu1606 -0.6 -3.3 methionine aminopeptidase compare
Atu3739 -0.6 -1.7 phosphoglycerate kinase compare
Atu2184 -0.6 -3.0 transcriptional regulator, AsnC family compare
Atu0595 -0.6 -3.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0886 -0.6 -1.1 hypothetical protein compare
Atu8138 -0.6 -0.7 hypothetical protein compare
Atu3353 -0.6 -4.1 mannose-1-phosphate guanylyltransferase compare
Atu3609 -0.6 -2.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0593 -0.6 -2.6 ABC transporter, membrane spanning protein compare
Atu1581 -0.6 -1.2 hypothetical protein compare
Atu0972 -0.5 -1.9 lipA protein compare
Atu0809 -0.5 -1.1 hypothetical protein compare
Atu4873 -0.5 -2.2 TetR family transcriptional regulator compare
Atu4419 -0.5 -3.4 LysR family transcriptional regulator compare
Atu8195 -0.5 -0.9 hypothetical protein compare
Atu3667 -0.5 -2.7 aspartate alpha-decarboxylase compare
Atu1308 -0.5 -2.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0591 -0.5 -3.6 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1774 -0.5 -2.6 ABC transporter, substrate binding protein (peptide) compare
Atu3483 -0.5 -2.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0701 -0.5 -3.3 GGDEF family protein compare
Atu1241 -0.5 -1.2 hypothetical protein compare
Atu0769 -0.5 -0.6 protoheme IX farnesyltransferase compare
Atu0638 -0.5 -1.5 hypothetical protein compare
Atu3121 -0.5 -0.5 cold shock protein compare
Atu1176 -0.5 -2.0 hypothetical protein compare
Atu1163 -0.5 -0.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2067 -0.5 -0.5 hypothetical protein compare
Atu0894 -0.5 -1.8 ABC transporter, membrane spanning protein compare
Atu0565 -0.5 -1.5 hypothetical protein compare
Atu2789 -0.5 -2.2 hypothetical protein compare
Atu0765 -0.5 -2.9 TldD compare
Atu0953 -0.5 -0.7 hypothetical protein compare
Atu2671 -0.5 -2.3 ABC transporter, membrane spanning protein compare
Atu1572 -0.5 -2.7 hydrolase compare
Atu2140 -0.5 -1.7 hypothetical protein compare
Atu4892 -0.5 -3.8 hypothetical protein compare
Atu0361 -0.5 -1.2 transcriptional regulator compare
Atu1223 -0.5 -0.8 hypothetical protein compare
Atu2640 -0.5 -2.0 hypothetical protein compare
Atu1759 -0.5 -3.1 L-serine dehydratase compare
Atu3265 -0.5 -2.1 hypothetical protein compare
Atu3706 -0.5 -3.3 D-3-phosphoglycerate dehydrogenase compare
Atu4079 -0.5 -2.0 hypothetical protein compare
Atu4166 -0.5 -1.2 UDP-glucose 4-epimerase compare
Atu2678 -0.5 -2.5 2'-5' RNA ligase compare
Atu1464 -0.5 -2.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu0038 -0.5 -2.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0190 -0.5 -2.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1846 -0.5 -0.9 hypothetical protein compare
Atu2766 -0.5 -4.0 NAD-glutamate dehydrogenase compare
Atu0533 -0.5 -1.6 putative inhibitor of septum formation compare
Atu0470 -0.5 -1.1 hypothetical protein compare
Atu8202 -0.5 -1.6 hypothetical protein compare
Atu4881 -0.5 -2.2 hypothetical protein compare
Atu2479 -0.5 -1.1 tRNA-Gly compare
Atu5471 -0.4 -1.3 hypothetical protein compare
Atu2040 -0.4 -2.0 phosphoserine phosphatase compare
Atu3144 -0.4 -1.4 GntR family transcriptional regulator compare
Atu1709 -0.4 -1.8 glycosyl hydrolase compare
Atu0997 -0.4 -1.4 hypothetical protein compare
Atu1110 -0.4 -1.6 cytosol aminopeptidase compare
Atu4171 -0.4 -2.2 cold-shock dead-box protein A compare
Atu5167 -0.4 -1.9 type IV secretion protein AvhB6 compare
Atu1522 -0.4 -2.1 transcriptional regulator, LacI family compare
Atu1620 -0.4 -2.9 triosephosphate isomerase compare
Atu5424 -0.4 -2.7 oxidoreductase compare
Atu0594 -0.4 -3.0 alpha-glucosidase compare
Atu3011 -0.4 -1.3 ArsR family transcriptional regulator compare
Atu3052 -0.4 -2.2 MarR family transcriptional regulator compare
Atu0469 -0.4 -2.3 hypothetical protein compare
Atu1220 -0.4 -2.2 methylated-DNA--protein-cysteine methyltransferase compare
Atu5451 -0.4 -0.6 hypothetical protein compare
Atu1847 -0.4 -0.9 hypothetical protein compare
Atu0375 -0.4 -1.1 small heat shock protein compare
Atu1052 -0.4 -1.6 hypothetical protein compare
Atu5501 -0.4 -0.9 hypothetical protein compare
Atu3619 -0.4 -1.6 hypothetical protein compare
Atu8017 -0.4 -2.1 hypothetical protein compare
Atu0093 -0.4 -1.6 Recombination protein compare
Atu2183 -0.4 -2.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0739 -0.4 -1.8 hypothetical protein compare
Atu2352 -0.4 -0.9 hypothetical protein compare
Atu3182 -0.4 -1.1 hypothetical protein compare
Atu0276 -0.4 -1.5 hypothetical protein compare
Atu4114 -0.4 -2.1 dipeptide ABC transporter permease compare
Atu1566 -0.4 -0.6 hypothetical protein compare
Atu0225 -0.4 -0.5 hypothetical protein compare
Atu6157 -0.4 -2.0 conserved hypothetical protein compare
Atu2113 -0.4 -1.2 N-acetylmuramoyl-L-alanine amidase compare
Atu5160 -0.4 -1.1 transcriptional regulator protein compare
Atu1980 -0.4 -1.0 hypothetical protein compare
Atu2657 -0.4 -1.2 hypothetical protein compare
Atu4763 -0.4 -1.0 AsnC family transcriptional regulator compare
Atu0640 -0.4 -0.9 hypothetical protein compare
Atu4615 -0.4 -2.5 glucose-1-phosphate thymidylyltransferase compare
Atu5131 -0.4 -1.8 ABC transporter nucleotide binding/ATPase compare
Atu0026 -0.4 -0.4 hypothetical protein compare
Atu5449 -0.4 -1.2 heat-shock protein compare
Atu3311 -0.4 -3.2 phosphomannose isomerase compare
Atu0188 -0.4 -1.0 ABC transporter, membrane spanning protein (peptide) compare
Atu3668 -0.4 -1.5 siderophore biosynthesis protein compare
Atu3014 -0.4 -1.0 hypothetical protein compare
Atu2115 -0.4 -2.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2802 -0.4 -2.1 precorrin-8X methylmutase compare
Atu2299 -0.4 -2.0 hypothetical protein compare
Atu2379 -0.4 -2.6 phosphomannomutase compare
Atu1660 -0.4 -1.9 hypothetical protein compare
Atu5152 -0.4 -1.7 hypothetical protein compare
Atu4614 -0.4 -2.3 glycosyltransferase compare
Atu4198 -0.4 -1.8 hypothetical protein compare
Atu0277 -0.4 -1.6 hypothetical protein compare
Atu1021 -0.4 -1.1 outer membrane protein compare
Atu4643 -0.4 -1.4 hypothetical protein compare
Atu1534 -0.4 -1.6 cytochrome-c oxidase, FixP chain compare
Atu0074 -0.4 -2.2 molybdopterin biosynthesis protein compare
Atu1644 -0.4 -1.1 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For stress Sodium Chlorite in Agrobacterium fabrum C58

For stress Sodium Chlorite across organisms