Experiment set5IT029 for Agrobacterium fabrum C58

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R2A with Sodium Chlorate 400 mM

Group: stress
Media: R2A + Sodium Chlorate (400 mM)
Culturing: Agro_ML11, 96 deep-well microplate; 0.8 mL volume, Aerobic, at 28 (C), shaken=700 rpm
By: Hans Carlson and Mitchell Thompson on 22-Jun-21
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1B E4

Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chlorate in Agrobacterium fabrum C58

For stress Sodium Chlorate across organisms

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
adenosylcobalamin salvage from cobalamin 5 5 4
adenosylcobinamide-GDP salvage from cobinamide I 5 5 3
adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide 6 6 3
adenosylcobinamide-GDP salvage from cobinamide II 6 5 3
cobalamin salvage (eukaryotic) 8 4 4
superpathway of adenosylcobalamin salvage from cobinamide I 8 7 3
superpathway of adenosylcobalamin salvage from cobinamide II 9 7 3
adenosylcobalamin biosynthesis II (aerobic) 33 29 3
adenosylcobalamin biosynthesis I (anaerobic) 36 26 3