Experiment set5IT026 for Agrobacterium fabrum C58

Compare to:

R2A with Potassium chromate 0.1 mM

200 most important genes:

  gene name fitness t score description  
Atu0184 -4.1 -4.8 glucokinase compare
Atu0346 -3.7 -4.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0399 -3.3 -9.9 dihydroorotase compare
Atu1307 -3.2 -8.1 dihydroorotase compare
Atu1874 -3.0 -2.9 RecA protein compare
Atu0017 -2.8 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0434 -2.7 -3.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1688 -2.5 -4.5 indole-3-glycerol-phosphate synthase compare
Atu2684 -2.4 -2.6 hypothetical protein compare
Atu3763 -2.4 -2.8 hypothetical protein compare
Atu2057 -2.3 -3.2 DNA helicase II compare
Atu1359 -2.2 -1.9 dnaK deletion suppressor protein compare
Atu1308 -2.2 -4.2 aspartate carbamoyl transferase catalytic subunit compare
Atu0486 -2.1 -7.8 dihydroorotate dehydrogenase compare
Atu2289 -2.1 -8.9 anthranilate synthase component I and II compare
Atu0298 -2.0 -6.8 orotidine 5 compare
Atu1687 -2.0 -5.9 anthranilate phosphoribosyltransferase compare
Atu4317 -1.9 -3.2 TetR family transcriptional regulator compare
Atu1077 -1.9 -4.2 DNA repair protein compare
Atu0400 -1.9 -5.1 orotate phosphoribosyltransferase compare
Atu2113 -1.8 -3.2 N-acetylmuramoyl-L-alanine amidase compare
Atu0031 -1.8 -2.1 PTS system, IIA component compare
Atu4075 -1.7 -7.6 glycogen synthase compare
Atu0039 -1.7 -2.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0103 -1.7 -9.2 penicillin-binding protein compare
Atu3469 -1.6 -2.8 phosphoglyceromutase compare
Atu2083 -1.6 -2.2 DNA repair protein RecN compare
Atu2125 -1.6 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0361 -1.6 -3.6 transcriptional regulator compare
Atu6098 -1.6 -1.0 transcriptional regulator, HTH family compare
Atu0269 -1.4 -4.6 exodeoxyribonuclease VII large subunit compare
Atu4773 -1.4 -2.5 two component response regulator compare
Atu4616 -1.4 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu2728 -1.3 -4.0 beta (1-->2) glucan export ATP-binding protein compare
Atu0647 -1.3 -4.7 phosphoribosylamine--glycine ligase compare
Atu1542 -1.3 -5.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0925 -1.3 -3.4 hypothetical protein compare
Atu3730 -1.2 -1.4 hypothetical protein compare
Atu0769 -1.2 -2.0 protoheme IX farnesyltransferase compare
Atu2028 -1.1 -3.3 transcriptional regulator, ArsR family compare
Atu0185 -1.1 -2.0 methylglyoxal synthase compare
Atu4599 -1.1 -5.3 IclR family transcriptional regulator compare
Atu0723 -1.1 -2.2 FAD dependent oxidoreductase compare
Atu1446 -1.0 -1.6 two component response regulator compare
Atu1686 -1.0 -6.4 peptidyl-prolyl cis-trans isomerse D compare
Atu3750 -1.0 -2.1 thiamine-phosphate pyrophosphorylase compare
Atu0977 -1.0 -2.5 serine protease DO-like protease compare
Atu1030 -1.0 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4897 -1.0 -2.0 hypothetical protein compare
Atu1644 -1.0 -3.7 hypothetical protein compare
Atu3754 -1.0 -3.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0029 -0.9 -3.6 S-adenosylhomocysteine hydrolase compare
Atu4108 -0.9 -5.8 ribonuclease D compare
Atu1163 -0.9 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1028 -0.9 -2.1 hypothetical protein compare
Atu1225 -0.9 -1.7 hypothetical protein compare
Atu1780 -0.9 -5.7 ATP-dependent DNA helicase compare
Atu0025 -0.9 -1.5 hypothetical protein compare
Atu0846 -0.9 -2.3 transcriptional regulator, MarR family compare
Atu4217 -0.9 -1.4 TetR family transcriptional regulator compare
Atu2802 -0.9 -6.1 precorrin-8X methylmutase compare
Atu1021 -0.9 -2.6 outer membrane protein compare
Atu1141 -0.9 -3.8 Phosphoribosylglycinamide synthetase compare
Atu3009 -0.8 -1.1 exopolysaccharide production protein compare
Atu4166 -0.8 -1.3 UDP-glucose 4-epimerase compare
Atu1891 -0.8 -1.6 cobalamin biosynthesis protein compare
Atu2640 -0.8 -2.6 hypothetical protein compare
Atu0189 -0.8 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu0041 -0.8 -1.3 glutamine amidotransferase compare
Atu1075 -0.8 -4.2 amidophosphoribosyltransferase compare
Atu1026 -0.8 -1.9 hypothetical protein compare
Atu3593 -0.8 -4.9 hypothetical protein compare
Atu1110 -0.8 -2.2 cytosol aminopeptidase compare
Atu1300 -0.8 -4.5 MFS permease compare
Atu2740 -0.8 -2.8 transcriptional regulator, GntR family compare
Atu1588 -0.8 -5.0 homoserine dehydrogenase compare
Atu8190 -0.8 -2.1 hypothetical protein compare
Atu4896 -0.8 -1.8 acetyltransferase compare
Atu3353 -0.8 -4.3 mannose-1-phosphate guanylyltransferase compare
Atu0565 -0.7 -3.1 hypothetical protein compare
Atu0784 -0.7 -2.8 hypothetical protein compare
Atu1052 -0.7 -2.3 hypothetical protein compare
Atu1457 -0.7 -1.9 hypothetical protein compare
Atu1850 -0.7 -2.7 phosphoribosylformylglycinamidine synthetase II compare
Atu0331 -0.7 -1.8 sigma-54 modulation protein compare
Atu2809 -0.7 -4.1 cobalamin biosynthesis protein compare
Atu4618 -0.7 -4.9 dTDP-rhamnose-3,5-epimerase compare
Atu1694 -0.7 -1.5 hypothetical protein compare
Atu2270 -0.7 -1.5 ATP-dependent Clp protease, proteolytic subunit compare
Atu5125 -0.7 -2.7 GntR family transcriptional regulator compare
Atu0435 -0.7 -1.5 tRNA-Gly compare
Atu2710 -0.7 -3.4 hypothetical protein compare
Atu4617 -0.7 -4.8 dTDP-D-glucose-4,6-dehydratase compare
Atu1445 -0.7 -2.5 two component sensor kinase compare
Atu2207 -0.7 -2.8 two component sensor kinase compare
Atu2073 -0.7 -2.1 membrane protein compare
Atu1339 -0.7 -1.9 ribonuclease E compare
Atu1182 -0.7 -1.6 hypothetical protein compare
Atu4614 -0.7 -4.5 glycosyltransferase compare
Atu0837 -0.7 -4.0 transcriptional regulator, MarR family compare
Atu0062 -0.7 -3.5 transcriptional regulator, ROK family compare
Atu3598 -0.7 -0.8 thiol:disulfide interchange protein compare
Atu2052 -0.7 -3.7 hypothetical protein compare
Atu4613 -0.7 -5.0 glycosyltransferase compare
Atu1129 -0.6 -3.2 excinuclease ABC chain C compare
Atu2798 -0.6 -2.7 precorrin-6y methyltransferase compare
Atu2807 -0.6 -3.7 cob(I)alamin adenosyltransferase compare
Atu3020 -0.6 -3.5 GntR family transcriptional regulator compare
Atu2805 -0.6 -2.8 cobalamin synthesis protein compare
Atu8017 -0.6 -1.5 hypothetical protein compare
Atu2793 -0.6 -2.8 cobyrinic acid a,c-diamide synthase compare
Atu3739 -0.6 -1.5 phosphoglycerate kinase compare
Atu0726 -0.6 -3.7 ring hydroxylating dioxygenase, alpha-subunit compare
Atu0920 -0.6 -2.9 hypothetical protein compare
Atu3006 -0.6 -1.9 hypothetical protein compare
Atu5424 -0.6 -4.1 oxidoreductase compare
Atu1777 -0.6 -2.3 hypothetical protein compare
Atu0188 -0.6 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0897 -0.6 -4.4 protease II compare
Atu4502 -0.6 -3.6 cobalamin synthesis protein compare
Atu0638 -0.6 -1.2 hypothetical protein compare
Atu2804 -0.6 -4.4 cobaltochelatase subunit compare
Atu3486 -0.6 -1.9 DeoR family transcriptional regulator compare
Atu8012 -0.6 -1.4 hypothetical protein compare
Atu0048 -0.6 -3.8 hypothetical protein compare
Atu0528 -0.6 -1.7 large conductance mechanosensitive channel protein compare
Atu1380 -0.6 -3.2 zinc metallopeptidase compare
Atu0876 -0.6 -1.4 superoxide dismutase compare
Atu1422 -0.6 -3.7 transcriptional regulator, MarR family compare
Atu1646 -0.6 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu3012 -0.6 -0.9 hypothetical protein compare
Atu4615 -0.6 -4.0 glucose-1-phosphate thymidylyltransferase compare
Atu0535 -0.6 -2.9 hypothetical protein compare
Atu4873 -0.6 -3.4 TetR family transcriptional regulator compare
Atu4200 -0.6 -1.7 hypothetical protein compare
Atu3727 -0.6 -2.0 hypothetical protein compare
Atu1677 -0.6 -1.6 queuine tRNA-ribosyltransferase compare
Atu1534 -0.6 -2.5 cytochrome-c oxidase, FixP chain compare
Atu5430 -0.6 -0.8 hypothetical protein compare
Atu0953 -0.6 -0.8 hypothetical protein compare
Atu8161 -0.6 -1.2 hypothetical protein compare
Atu0468 -0.6 -3.4 hypothetical protein compare
Atu1536 -0.6 -2.6 cytochrome C oxidase, FixO chain compare
Atu2682 -0.6 -1.7 hypothetical protein compare
Atu2808 -0.6 -3.3 cobyric acid synthase compare
Atu0162 -0.6 -3.5 biopolymer transport protein compare
Atu2803 -0.6 -2.1 Cobalamin biosynthesis associated protein compare
Atu8145 -0.6 -2.1 hypothetical protein compare
Atu0727 -0.6 -3.4 ferredoxin I compare
Atu1140 -0.6 -1.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5475 -0.5 -1.6 hypothetical protein compare
Atu1503 -0.5 -0.7 hypothetical protein compare
Atu0611 -0.5 -2.6 ABC transporter, membrane spanning protein compare
Atu2800 -0.5 -2.0 precorrin-3B C17-methyltransferase compare
Atu3471 -0.5 -3.9 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
Atu1714 -0.5 -1.0 exonuclease III compare
Atu5142 -0.5 -0.9 hypothetical protein compare
Atu1774 -0.5 -3.6 ABC transporter, substrate binding protein (peptide) compare
Atu0544 -0.5 -1.6 hypothetical protein compare
Atu4711 -0.5 -2.7 two component sensor kinase compare
Atu3910 -0.5 -2.6 LamB/YcsF family protein compare
Atu2650 -0.5 -3.4 glycerol-3-phosphate dehydrogenase compare
Atu0501 -0.5 -3.6 acyl-CoA dehydrogenase compare
Atu3478 -0.5 -3.2 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu2272 -0.5 -2.4 hypothetical protein compare
Atu3634 -0.5 -1.9 penicillin-binding protein dacf precursor compare
Atu2796 -0.5 -2.8 precorrin-4 C11-methyltransferase compare
Atu1130 -0.5 -2.0 dehydrogenase compare
Atu4792 -0.5 -1.1 hypothetical protein compare
Atu4887 -0.5 -2.1 hypothetical protein compare
Atu2238 -0.5 -2.9 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2620 -0.5 -0.8 hypothetical protein compare
Atu0312 -0.5 -3.7 cysteine synthase compare
Atu0689 -0.5 -3.4 ribosomal large subunit pseudouridine synthase B compare
Atu0912 -0.5 -0.9 Na+/H+ antiporter compare
Atu0973 -0.5 -2.2 cycH protein compare
Atu3481 -0.5 -2.6 enoyl-CoA hydratase compare
Atu1454 -0.5 -2.2 siroheme synthase compare
Atu1364 -0.5 -2.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1530 -0.5 -3.2 nitrogen fixation protein FixG compare
Atu3311 -0.5 -3.9 phosphomannose isomerase compare
Atu2801 -0.5 -1.7 precorrin-2 C20 methyltransferase compare
Atu0922 -0.5 -1.0 hypothetical protein compare
Atu4077 -0.5 -3.1 glycogen branching protein compare
Atu4373 -0.5 -3.3 LacI family transcriptional regulator compare
Atu3913 -0.5 -3.2 biotin carboxylase compare
Atu2001 -0.5 -3.1 excinuclease ABC subunit B compare
Atu3393 -0.5 -2.0 pseudoazurin compare
Atu0097 -0.5 -2.7 hypothetical protein compare
Atu3482 -0.5 -2.4 pantoate--beta-alanine ligase compare
Atu0976 -0.5 -1.3 cycL protein compare
Atu4346 -0.5 -2.1 hypothetical protein compare
Atu5540 -0.5 -0.6 hypothetical protein compare
Atu0630 -0.5 -0.8 hypothetical protein compare
Atu4875 -0.5 -1.7 hypothetical protein compare
Atu1387 -0.5 -1.5 transcriptional regulator, GntR family compare
Atu3473 -0.5 -2.8 2-oxoisovalerate dehydrogenase subunit alpha compare
Atu3183 -0.5 -0.5 hypothetical protein compare
Atu2349 -0.5 -1.1 hypothetical protein compare
Atu2205 -0.5 -2.6 transcriptional regulator, MarR family compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Potassium chromate across organisms