Experiment set5IT025 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium arsenate dibasic heptahydrate 50 mM

200 most important genes:

  gene name fitness t score description  
Atu1739 -6.2 -6.4 permease compare
Atu1491 -4.5 -10.0 sodium bile acid symporter family protein conserved
Atu1492 -4.0 -7.9 transcriptional regulator, ArsR family compare
Atu1688 -2.7 -5.4 indole-3-glycerol-phosphate synthase compare
Atu0912 -2.4 -2.3 Na+/H+ antiporter compare
Atu2289 -2.4 -11.6 anthranilate synthase component I and II compare
Atu1687 -2.4 -6.1 anthranilate phosphoribosyltransferase compare
Atu1490 -2.2 -3.7 arsenate reductase compare
Atu1307 -2.1 -5.6 dihydroorotase compare
Atu0647 -2.0 -7.7 phosphoribosylamine--glycine ligase compare
Atu1686 -2.0 -11.1 peptidyl-prolyl cis-trans isomerse D compare
Atu3754 -1.9 -4.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0298 -1.9 -6.4 orotidine 5 compare
Atu0486 -1.9 -5.8 dihydroorotate dehydrogenase compare
Atu8087 -1.9 -1.5 putative peptidoglycan binding protein compare
Atu0017 -1.8 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2125 -1.8 -3.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu3598 -1.7 -2.6 thiol:disulfide interchange protein compare
Atu1308 -1.6 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0040 -1.6 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0031 -1.6 -2.1 PTS system, IIA component compare
Atu0184 -1.6 -2.6 glucokinase compare
Atu0434 -1.5 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4618 -1.5 -10.4 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -1.4 -7.1 glycosyltransferase compare
Atu0399 -1.4 -5.1 dihydroorotase compare
Atu1844 -1.4 -1.4 Phosphoribosylformylglycinamidine synthetase compare
Atu4317 -1.3 -2.8 TetR family transcriptional regulator compare
Atu3750 -1.3 -2.2 thiamine-phosphate pyrophosphorylase compare
Atu4617 -1.3 -7.2 dTDP-D-glucose-4,6-dehydratase compare
Atu0400 -1.3 -5.0 orotate phosphoribosyltransferase compare
Atu1028 -1.3 -2.4 hypothetical protein compare
Atu0043 -1.3 -2.6 imidazoleglycerol-phosphate dehydratase compare
Atu1446 -1.3 -2.6 two component response regulator compare
Atu4613 -1.3 -9.2 glycosyltransferase compare
Atu1140 -1.2 -3.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2057 -1.2 -3.0 DNA helicase II compare
Atu0185 -1.2 -4.4 methylglyoxal synthase compare
Atu1141 -1.2 -7.1 Phosphoribosylglycinamide synthetase compare
Atu8095 -1.2 -7.6 hypothetical protein compare
Atu3008 -1.2 -1.3 hypothetical protein compare
Atu1359 -1.2 -1.4 dnaK deletion suppressor protein compare
Atu1845 -1.2 -3.7 phosphoribosylformylglycinamidine synthase I compare
Atu6036 -1.1 -1.2 entry-exclusion protein compare
Atu4896 -1.1 -2.1 acetyltransferase compare
Atu3353 -1.1 -8.0 mannose-1-phosphate guanylyltransferase compare
Atu1075 -1.1 -6.8 amidophosphoribosyltransferase compare
Atu1030 -1.1 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1489 -1.1 -6.0 arsenical resistance protein compare
Atu2183 -1.1 -7.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4470 -1.0 -6.2 iron ABC transporter ATPase compare
Atu1588 -1.0 -7.3 homoserine dehydrogenase compare
Atu3755 -1.0 -3.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1445 -1.0 -4.2 two component sensor kinase compare
Atu0269 -1.0 -2.8 exodeoxyribonuclease VII large subunit compare
Atu1468 -1.0 -6.1 hypothetical protein compare
Atu0272 -1.0 -3.7 transcriptional regulator, MarR family compare
Atu4615 -1.0 -5.9 glucose-1-phosphate thymidylyltransferase compare
Atu0598 -1.0 -5.4 phosphogluconate dehydratase compare
Atu3496 -1.0 -2.5 hypothetical protein compare
Atu4773 -1.0 -1.9 two component response regulator compare
Atu1904 -0.9 -2.7 transcriptional regulator compare
Atu2073 -0.9 -3.6 membrane protein compare
Atu0501 -0.9 -7.2 acyl-CoA dehydrogenase compare
Atu2040 -0.9 -4.8 phosphoserine phosphatase compare
Atu4897 -0.9 -1.9 hypothetical protein compare
Atu2239 -0.9 -2.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0976 -0.9 -1.5 cycL protein compare
Atu0876 -0.9 -1.3 superoxide dismutase compare
Atu0971 -0.9 -4.0 two component sensor kinase compare
Atu3706 -0.9 -5.1 D-3-phosphoglycerate dehydrogenase compare
Atu8088 -0.9 -2.3 hypothetical protein compare
Atu1850 -0.9 -2.7 phosphoribosylformylglycinamidine synthetase II compare
Atu4468 -0.9 -5.1 iron transport ABC transporter permease compare
Atu0331 -0.8 -1.8 sigma-54 modulation protein compare
Atu0977 -0.8 -2.7 serine protease DO-like protease compare
Atu1782 -0.8 -3.0 hypothetical protein compare
Atu1810 -0.8 -1.3 hypothetical protein compare
Atu2548 -0.8 -5.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1163 -0.7 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3707 -0.7 -2.3 phosphoserine aminotransferase compare
Atu3006 -0.7 -3.3 hypothetical protein compare
Atu1327 -0.7 -1.8 NADH-ubiquinone oxidoreductase compare
Atu1801 -0.7 -1.6 hypothetical protein compare
Atu4882 -0.7 -2.3 hypothetical protein compare
Atu0225 -0.7 -0.8 hypothetical protein compare
Atu0503 -0.7 -5.1 enoyl-CoA hydratase compare
Atu4471 -0.7 -4.5 ABC transporter substrate-binding protein compare
Atu0767 -0.7 -3.5 cytochrome c oxidase subunit II compare
Atu2710 -0.7 -3.4 hypothetical protein compare
Atu3763 -0.7 -0.8 hypothetical protein compare
Atu1734 -0.7 -1.8 hypothetical protein compare
Atu0322 -0.7 -2.5 enoyl CoA hydratase compare
Atu2237 -0.7 -2.1 cytochrome c1 compare
Atu6165 -0.7 -1.0 hypothetical protein compare
Atu2803 -0.7 -1.8 Cobalamin biosynthesis associated protein compare
Atu4166 -0.7 -1.7 UDP-glucose 4-epimerase compare
Atu2640 -0.7 -2.2 hypothetical protein compare
Atu1550 -0.6 -2.7 polypeptide deformylase compare
Atu2406 -0.6 -2.2 hypothetical protein compare
Atu4893 -0.6 -3.0 hypothetical protein compare
Atu0502 -0.6 -3.3 acetyl-CoA acetyltransferase compare
Atu0029 -0.6 -2.7 S-adenosylhomocysteine hydrolase compare
Atu0103 -0.6 -4.5 penicillin-binding protein compare
Atu1542 -0.6 -3.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3016 -0.6 -3.8 phosphoglyceromutase compare
Atu0041 -0.6 -0.9 glutamine amidotransferase compare
Atu2772 -0.6 -2.0 Invasion protein A compare
Atu3727 -0.6 -2.1 hypothetical protein compare
Atu3183 -0.6 -0.7 hypothetical protein compare
Atu1495 -0.6 -1.9 hypothetical protein compare
Atu3034 -0.6 -2.0 ROK family transcriptional regulator compare
Atu0401 -0.6 -3.9 fructokinase compare
Atu1422 -0.6 -4.0 transcriptional regulator, MarR family compare
Atu4469 -0.6 -2.3 iron ABC transporter permease compare
Atu2796 -0.6 -2.7 precorrin-4 C11-methyltransferase compare
Atu2052 -0.6 -2.7 hypothetical protein compare
Atu8099 -0.6 -1.7 hypothetical protein compare
Atu4616 -0.6 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu2804 -0.6 -3.6 cobaltochelatase subunit compare
Atu2809 -0.6 -3.6 cobalamin biosynthesis protein compare
Atu3120 -0.6 -0.9 hypothetical protein compare
Atu0981 -0.6 -3.8 glutamate-ammonia-ligase adenylyltransferase compare
Atu4873 -0.6 -3.0 TetR family transcriptional regulator compare
Atu1891 -0.6 -1.7 cobalamin biosynthesis protein compare
Atu8161 -0.6 -1.2 hypothetical protein compare
Atu5125 -0.6 -2.4 GntR family transcriptional regulator compare
Atu1077 -0.6 -1.6 DNA repair protein compare
Atu4881 -0.6 -3.1 hypothetical protein compare
Atu2805 -0.6 -3.2 cobalamin synthesis protein compare
Atu1902 -0.6 -2.4 transketolase compare
Atu0590 -0.6 -3.0 transcriptional regulator repressor compare
Atu3267 -0.5 -2.4 dipeptide ABC transporter permease compare
Atu3733 -0.5 -1.6 hypothetical protein compare
Atu4406 -0.5 -1.4 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu3015 -0.5 -3.0 hypothetical protein compare
Atu6186 -0.5 -2.7 virA/G regulated protein compare
Atu0435 -0.5 -1.3 tRNA-Gly compare
Atu2193 -0.5 -0.7 hypothetical protein compare
Atu1364 -0.5 -2.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3468 -0.5 -0.6 hypothetical protein compare
Atu1518 -0.5 -2.4 transcriptional regulator, Fur family compare
Atu4889 -0.5 -3.2 hypothetical protein compare
Atu3311 -0.5 -4.3 phosphomannose isomerase compare
Atu3469 -0.5 -1.2 phosphoglyceromutase compare
Atu2238 -0.5 -3.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2753 -0.5 -3.7 ATP-dependent helicase compare
Atu2537 -0.5 -3.0 transcriptional regulator, TetR family compare
Atu3010 -0.5 -3.1 hypothetical protein compare
Atu1182 -0.5 -1.1 hypothetical protein compare
Atu4892 -0.5 -3.8 hypothetical protein compare
Atu0640 -0.5 -1.6 hypothetical protein compare
Atu1154 -0.5 -1.8 hypothetical protein compare
Atu3014 -0.5 -1.4 hypothetical protein compare
Atu4075 -0.5 -3.0 glycogen synthase compare
Atu0166 -0.5 -1.5 hypothetical protein compare
Atu2798 -0.5 -2.0 precorrin-6y methyltransferase compare
Atu8118 -0.5 -2.3 putative universal stress protein compare
Atu3705 -0.5 -1.8 hypothetical protein compare
Atu2207 -0.5 -1.8 two component sensor kinase compare
Atu0236 -0.5 -1.3 hypothetical protein compare
Atu0698 -0.5 -1.9 hypothetical protein compare
Atu2802 -0.5 -3.0 precorrin-8X methylmutase compare
Atu0823 -0.5 -3.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0689 -0.5 -3.6 ribosomal large subunit pseudouridine synthase B compare
Atu1252 -0.5 -2.3 hypothetical protein compare
Atu4108 -0.5 -2.7 ribonuclease D compare
Atu3746 -0.5 -1.8 hypothetical protein compare
Atu1874 -0.5 -0.9 RecA protein compare
Atu2204 -0.5 -1.5 hypothetical protein compare
Atu1750 -0.5 -1.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu0837 -0.5 -2.5 transcriptional regulator, MarR family compare
Atu1177 -0.5 -2.1 hypothetical protein compare
Atu1062 -0.5 -1.1 phosphatidylserine synthase compare
Atu3144 -0.5 -2.2 GntR family transcriptional regulator compare
Atu2554 -0.5 -0.9 lysyl-tRNA synthetase compare
Atu1074 -0.5 -3.3 NAD/NADP dependent oxidoreductase compare
Atu1685 -0.5 -0.5 hypothetical protein compare
Atu1770 -0.5 -2.7 glutamine synthetase compare
Atu4187 -0.5 -0.8 tRNA-Met compare
Atu2146 -0.5 -2.0 hypothetical protein compare
Atu3518 -0.5 -2.4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4874 -0.5 -2.6 hypothetical protein compare
Atu1677 -0.5 -1.3 queuine tRNA-ribosyltransferase compare
Atu8202 -0.5 -1.9 hypothetical protein compare
Atu0361 -0.5 -1.4 transcriptional regulator compare
Atu2799 -0.5 -2.1 precorrin-6x reductase compare
Atu0768 -0.5 -2.9 cytochrome-c oxidase chain I compare
Atu2130 -0.5 -1.4 hypothetical protein compare
Atu3032 -0.4 -1.7 hypothetical protein compare
Atu1765 -0.4 -3.1 transcriptional regulator, LysR family compare
Atu3460 -0.4 -2.3 RhtB family transporter compare
Atu3483 -0.4 -1.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0062 -0.4 -2.4 transcriptional regulator, ROK family compare
Atu3022 -0.4 -2.5 sugar ABC transporter permease compare
Atu2492 -0.4 -3.7 MFS permease compare
Atu3668 -0.4 -1.9 siderophore biosynthesis protein compare
Atu0677 -0.4 -1.1 hypothetical protein compare
Atu1779 -0.4 -1.1 hypothetical protein compare
Atu5485 -0.4 -1.1 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For stress Sodium arsenate dibasic heptahydrate in Agrobacterium fabrum C58

For stress Sodium arsenate dibasic heptahydrate across organisms