Experiment set5IT025 for Agrobacterium fabrum C58
R2A with Sodium arsenate dibasic heptahydrate 50 mM
Group: stressMedia: R2A + Sodium arsenate dibasic heptahydrate (50 mM)
Culturing: Agro_ML11, 96 deep-well microplate; 0.8 mL volume, Aerobic, at 28 (C), shaken=700 rpm
By: Hans Carlson and Mitchell Thompson on 22-Jun-21
Media components: 0.5 g/L Bacto Peptone, 0.5 g/L casamino acids, 0.5 g/L Yeast Extract, 0.5 g/L D-Glucose, 0.5 g/L Starch, 0.3 g/L Potassium phosphate dibasic, 0.05 g/L Magnesium Sulfate Heptahydrate, 0.3 g/L Sodium pyruvate
Growth plate: 1B A4
Specific Phenotypes
For 5 genes in this experiment
For stress Sodium arsenate dibasic heptahydrate in Agrobacterium fabrum C58
For stress Sodium arsenate dibasic heptahydrate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Arsenic resistance | 2 |
| Deoxyribose and Deoxynucleoside Catabolism | 1 |
| Ribitol, Xylitol, Arabitol, Mannitol and Sorbitol utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| arsenate detoxification III | 2 | 1 | 1 |
| arsenic detoxification (bacteria) | 4 | 2 | 1 |
| arsenate detoxification I | 6 | 3 | 1 |
| arsenic detoxification (plants) | 6 | 2 | 1 |
| arsenic detoxification (yeast) | 12 | 3 | 1 |