Experiment set5IT021 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium Chloride 700 mM

200 most important genes:

  gene name fitness t score description  
Atu3763 -5.5 -3.7 hypothetical protein compare
Atu0188 -4.9 -4.1 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -4.9 -3.5 TetR family transcriptional regulator compare
Atu4617 -4.4 -12.1 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -4.0 -11.6 glucose-1-phosphate thymidylyltransferase compare
Atu4166 -3.8 -3.0 UDP-glucose 4-epimerase compare
Atu4610 -3.8 -12.1 sugar nucleotide epimerase/dehydratase compare
Atu2439 -3.7 -1.8 hypothetical protein compare
Atu4613 -3.7 -15.6 glycosyltransferase compare
Atu1030 -3.5 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2183 -3.5 -6.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0017 -3.4 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1645 -3.4 -8.7 ABC transporter, substrate binding protein compare
Atu4618 -3.3 -10.6 dTDP-rhamnose-3,5-epimerase compare
Atu4217 -3.2 -2.9 TetR family transcriptional regulator compare
Atu0190 -3.2 -7.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3353 -3.2 -13.0 mannose-1-phosphate guanylyltransferase compare
Atu1739 -3.2 -4.4 permease compare
Atu1163 -3.2 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0331 -3.1 -4.4 sigma-54 modulation protein compare
Atu4614 -3.1 -7.3 glycosyltransferase compare
Atu4616 -3.1 -2.6 dTDP-4-dehydrorhamnose reductase compare
Atu0189 -3.1 -4.2 ABC transporter, membrane spanning protein (peptide) compare
Atu3311 -3.0 -14.4 phosphomannose isomerase compare
Atu1774 -2.7 -7.8 ABC transporter, substrate binding protein (peptide) compare
Atu1688 -2.7 -4.9 indole-3-glycerol-phosphate synthase compare
Atu0031 -2.7 -2.0 PTS system, IIA component compare
Atu0030 -2.7 -2.0 phosphocarrier protein HPr compare
Atu2289 -2.6 -10.1 anthranilate synthase component I and II compare
Atu1646 -2.5 -5.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0925 -2.5 -4.1 hypothetical protein compare
Atu2207 -2.4 -3.1 two component sensor kinase compare
Atu1028 -2.4 -3.4 hypothetical protein compare
Atu1644 -2.4 -4.2 hypothetical protein compare
Atu1647 -2.4 -9.3 ABC transporter, membrane spanning protein compare
Atu0388 -2.3 -12.3 two component sensor kinase compare
Atu4346 -2.2 -4.6 hypothetical protein compare
Atu1449 -2.2 -5.2 potassium uptake protein compare
Atu0912 -2.1 -1.8 Na+/H+ antiporter compare
Atu2321 -2.1 -9.8 D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) compare
Atu1204 -2.0 -7.9 potassium uptake protein compare
Atu2801 -2.0 -5.1 precorrin-2 C20 methyltransferase compare
Atu2746 -2.0 -4.1 hypothetical protein compare
Atu1359 -2.0 -1.5 dnaK deletion suppressor protein compare
Atu1687 -1.9 -5.0 anthranilate phosphoribosyltransferase compare
Atu3779 -1.9 -7.9 lytic murein transglycosylase compare
Atu2810 -1.8 -8.3 cobalamin biosynthetic protein compare
Atu2379 -1.8 -9.5 phosphomannomutase compare
Atu1542 -1.8 -7.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4773 -1.8 -2.2 two component response regulator compare
Atu4608 -1.8 -9.2 hypothetical protein compare
Atu1891 -1.7 -2.4 cobalamin biosynthesis protein compare
Atu2824 -1.7 -4.3 hypothetical protein compare
Atu4609 -1.7 -9.2 glycosyltransferase compare
Atu0361 -1.6 -2.7 transcriptional regulator compare
Atu2368 -1.6 -1.5 hypothetical protein compare
Atu0977 -1.6 -2.7 serine protease DO-like protease compare
Atu3608 -1.6 -5.6 hypothetical protein compare
Atu2809 -1.5 -5.9 cobalamin biosynthesis protein compare
Atu0712 -1.5 -7.8 hypothetical protein compare
Atu2616 -1.5 -7.1 hypothetical protein compare
Atu0535 -1.5 -3.6 hypothetical protein compare
Atu0399 -1.5 -4.6 dihydroorotase compare
Atu2796 -1.4 -5.7 precorrin-4 C11-methyltransferase compare
Atu0660 -1.4 -4.9 hydrolase compare
Atu3634 -1.4 -3.8 penicillin-binding protein dacf precursor compare
Atu0533 -1.4 -2.7 putative inhibitor of septum formation compare
Atu2304 -1.3 -6.7 bacteroid development protein compare
Atu2805 -1.3 -3.9 cobalamin synthesis protein compare
Atu1686 -1.3 -7.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0923 -1.3 -3.6 hypothetical protein compare
Atu1685 -1.3 -1.0 hypothetical protein compare
Atu2808 -1.3 -3.7 cobyric acid synthase compare
Atu1679 -1.3 -3.1 peptidyl prolyl cis-trans isomerase compare
Atu1056 -1.3 -2.8 hypothetical protein compare
Atu0434 -1.3 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0895 -1.2 -2.4 ABC transporter, substrate binding protein compare
Atu0419 -1.2 -2.7 two component sensor kinase compare
Atu1546 -1.2 -3.8 transcriptional regulator, MerR family compare
Atu2804 -1.2 -6.1 cobaltochelatase subunit compare
Atu2803 -1.2 -3.6 Cobalamin biosynthesis associated protein compare
Atu1570 -1.2 -1.0 hypothetical protein compare
Atu0931 -1.2 -7.8 penicillin binding protein compare
Atu2802 -1.2 -6.1 precorrin-8X methylmutase compare
Atu2710 -1.1 -4.6 hypothetical protein compare
Atu0036 -1.1 -3.1 hypothetical protein compare
Atu3886 -1.1 -5.6 lysophospholipase compare
Atu2798 -1.1 -3.3 precorrin-6y methyltransferase compare
Atu2692 -1.1 -2.6 intracellular septation protein compare
Atu3609 -1.1 -4.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0979 -1.1 -5.1 two component sensor kinase compare
Atu0920 -1.1 -2.8 hypothetical protein compare
Atu4108 -1.1 -4.5 ribonuclease D compare
Atu0269 -1.0 -2.9 exodeoxyribonuclease VII large subunit compare
Atu2040 -1.0 -4.8 phosphoserine phosphatase compare
Atu2800 -1.0 -1.8 precorrin-3B C17-methyltransferase compare
Atu0184 -1.0 -1.6 glucokinase compare
Atu2615 -1.0 -4.7 hypothetical protein compare
Atu0479 -1.0 -4.7 ABC transporter, substrate binding protein (amino acid) compare
Atu0051 -1.0 -2.9 two component sensor kinase compare
Atu3469 -1.0 -1.6 phosphoglyceromutase compare
Atu0836 -1.0 -2.1 Glutathione-S-transferase compare
Atu8130 -1.0 -4.8 hypothetical protein compare
Atu0784 -1.0 -2.4 hypothetical protein compare
Atu0435 -0.9 -1.9 tRNA-Gly compare
Atu0824 -0.9 -1.0 hypothetical protein compare
Atu2807 -0.9 -3.3 cob(I)alamin adenosyltransferase compare
Atu3593 -0.9 -4.7 hypothetical protein compare
Atu8087 -0.9 -0.8 putative peptidoglycan binding protein compare
Atu4711 -0.9 -3.9 two component sensor kinase compare
Atu3183 -0.9 -0.7 hypothetical protein compare
Atu8018 -0.9 -0.8 hypothetical protein compare
Atu0499 -0.9 -4.1 hypothetical protein compare
Atu3912 -0.9 -4.1 hypothetical protein compare
Atu0501 -0.9 -5.5 acyl-CoA dehydrogenase compare
Atu0486 -0.8 -2.3 dihydroorotate dehydrogenase compare
Atu1621 -0.8 -3.2 hypothetical protein compare
Atu1705 -0.8 -2.3 SEC-independent protein translocase protein compare
Atu1810 -0.8 -0.7 hypothetical protein compare
Atu3911 -0.8 -3.2 hypothetical protein compare
Atu0926 -0.8 -2.6 hypothetical protein compare
Atu2193 -0.8 -0.8 hypothetical protein compare
Atu3910 -0.8 -3.3 LamB/YcsF family protein compare
Atu0233 -0.8 -4.7 lysozyme compare
Atu1694 -0.8 -1.3 hypothetical protein compare
Atu3707 -0.8 -1.6 phosphoserine aminotransferase compare
Atu5045 -0.8 -1.0 hypothetical protein compare
Atu5057 -0.8 -1.6 hypothetical protein compare
Atu2793 -0.8 -2.5 cobyrinic acid a,c-diamide synthase compare
Atu1103 -0.8 -1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3468 -0.8 -0.6 hypothetical protein compare
Atu3343 -0.8 -3.4 trehalose utilization-like protein compare
Atu1380 -0.8 -3.6 zinc metallopeptidase compare
Atu0659 -0.8 -2.5 NTP pyrophosphohydrolase, MutT family compare
Atu4160 -0.8 -2.8 RNA polymerase sigma factor compare
Atu3342 -0.8 -2.3 trehalose utilization-like protein compare
Atu1307 -0.7 -3.2 dihydroorotase compare
Atu3207 -0.7 -5.3 diguanylate cyclase compare
Atu5540 -0.7 -0.7 hypothetical protein compare
Atu1699 -0.7 -1.5 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu3913 -0.7 -3.4 biotin carboxylase compare
Atu0842 -0.7 -0.7 hypothetical protein compare
Atu3182 -0.7 -1.9 hypothetical protein compare
Atu1258 -0.7 -3.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu1846 -0.7 -1.2 hypothetical protein compare
Atu6153 -0.7 -2.5 conserved hypothetical protein compare
Atu5106 -0.7 -2.0 DNA binding protein compare
Atu1435 -0.7 -1.4 hypothetical protein compare
Atu5186 -0.7 -1.5 hypothetical protein compare
Atu3339 -0.7 -3.3 trehalose/maltose ABC transporter permease compare
Atu2189 -0.7 -2.6 hypothetical protein compare
Atu1760 -0.7 -0.9 hypothetical protein compare
Atu1446 -0.7 -1.2 two component response regulator compare
Atu0360 -0.7 -3.9 apolipoprotein N-acyltransferase compare
Atu2451 -0.7 -3.4 hypothetical protein compare
Atu0972 -0.7 -2.4 lipA protein compare
Atu3572 -0.7 -3.1 transcriptional regulator compare
Atu2795 -0.7 -2.8 cobalamin biosynthetic protein compare
Atu3210 -0.7 -4.4 ftsk cell division protein compare
Atu0109 -0.7 -1.7 transcriptional regulator, MarR family compare
Atu2799 -0.7 -2.9 precorrin-6x reductase compare
Atu2169 -0.7 -2.6 hypothetical protein compare
Atu1038 -0.6 -2.0 two component response regulator compare
Atu1581 -0.6 -1.5 hypothetical protein compare
Atu5424 -0.6 -3.9 oxidoreductase compare
Atu5125 -0.6 -2.5 GntR family transcriptional regulator compare
Atu2045 -0.6 -3.1 HFLK protein compare
Atu3755 -0.6 -1.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1308 -0.6 -2.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2787 -0.6 -0.5 hypothetical protein compare
Atu4471 -0.6 -3.6 ABC transporter substrate-binding protein compare
Atu5158 -0.6 -1.3 hypothetical protein compare
Atu2585 -0.6 -1.9 hypothetical protein compare
Atu1177 -0.6 -2.0 hypothetical protein compare
Atu0658 -0.6 -3.7 phosphate permease compare
Atu6195 -0.6 -2.0 conserved hypothetical protein compare
Atu0981 -0.6 -4.0 glutamate-ammonia-ligase adenylyltransferase compare
Atu2083 -0.6 -1.7 DNA repair protein RecN compare
Atu3973 -0.6 -2.6 hypothetical protein compare
Atu8124 -0.6 -4.0 hypothetical protein compare
Atu2124 -0.6 -2.5 transcriptional regulator, ArsR family compare
Atu3754 -0.6 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0876 -0.6 -1.2 superoxide dismutase compare
Atu3120 -0.6 -0.6 hypothetical protein compare
Atu5163 -0.6 -1.0 type IV secretion protein AvhB2 compare
Atu3740 -0.6 -2.7 fructose bisphosphate aldolase compare
Atu0502 -0.6 -2.4 acetyl-CoA acetyltransferase compare
Atu1892 -0.6 -1.3 hypothetical protein compare
Atu1499 -0.6 -3.0 penicillin binding protein compare
Atu6098 -0.6 -0.4 transcriptional regulator, HTH family compare
Atu3706 -0.6 -3.1 D-3-phosphoglycerate dehydrogenase compare
Atu8023 -0.6 -1.0 hypothetical protein compare
Atu2140 -0.6 -1.0 hypothetical protein compare
Atu3603 -0.6 -1.3 two component response regulator compare
Atu5088 -0.6 -1.1 hypothetical protein compare
Atu2656 -0.6 -2.9 hypothetical protein compare
Atu1355 -0.6 -1.8 hypothetical protein compare
Atu0846 -0.6 -1.8 transcriptional regulator, MarR family compare
Atu2067 -0.6 -0.5 hypothetical protein compare
Atu3400 -0.6 -1.4 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For stress Sodium Chloride in Agrobacterium fabrum C58

For stress Sodium Chloride across organisms