Experiment set5IT020 for Agrobacterium fabrum C58

Compare to:

R2A with Calcium Chloride Dihydrate 87.5 mM

200 most important genes:

  gene name fitness t score description  
Atu4616 -5.9 -3.6 dTDP-4-dehydrorhamnose reductase compare
Atu2728 -5.2 -7.1 beta (1-->2) glucan export ATP-binding protein compare
Atu1030 -5.0 -3.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2183 -4.2 -12.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4615 -3.9 -13.2 glucose-1-phosphate thymidylyltransferase compare
Atu0971 -3.9 -7.9 two component sensor kinase compare
Atu3353 -3.9 -12.9 mannose-1-phosphate guanylyltransferase compare
Atu3763 -3.6 -2.5 hypothetical protein compare
Atu4618 -3.6 -13.9 dTDP-rhamnose-3,5-epimerase compare
Atu1307 -3.6 -7.1 dihydroorotase compare
Atu4617 -3.4 -10.6 dTDP-D-glucose-4,6-dehydratase compare
Atu3311 -3.4 -18.1 phosphomannose isomerase compare
Atu4166 -3.4 -3.5 UDP-glucose 4-epimerase compare
Atu4613 -3.3 -14.3 glycosyltransferase compare
Atu4614 -3.3 -10.7 glycosyltransferase compare
Atu6098 -3.2 -1.6 transcriptional regulator, HTH family compare
Atu2289 -3.0 -12.6 anthranilate synthase component I and II compare
Atu0486 -3.0 -5.0 dihydroorotate dehydrogenase compare
Atu3739 -2.9 -3.9 phosphoglycerate kinase compare
Atu0184 -2.8 -4.1 glucokinase compare
Atu1687 -2.8 -7.2 anthranilate phosphoribosyltransferase compare
Atu0031 -2.8 -2.3 PTS system, IIA component compare
Atu2800 -2.7 -4.7 precorrin-3B C17-methyltransferase compare
Atu1308 -2.7 -6.2 aspartate carbamoyl transferase catalytic subunit compare
Atu0017 -2.7 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2379 -2.6 -10.3 phosphomannomutase compare
Atu4773 -2.6 -2.7 two component response regulator compare
Atu3469 -2.5 -2.8 phosphoglyceromutase compare
Atu0434 -2.5 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu8167 -2.4 -12.0 putative transmembrane protein compare
Atu0298 -2.4 -7.2 orotidine 5 compare
Atu0331 -2.4 -4.7 sigma-54 modulation protein compare
Atu2801 -2.4 -5.3 precorrin-2 C20 methyltransferase compare
Atu0784 -2.3 -3.7 hypothetical protein compare
Atu2798 -2.3 -5.5 precorrin-6y methyltransferase compare
Atu4610 -2.2 -12.4 sugar nucleotide epimerase/dehydratase compare
Atu1844 -2.2 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu1028 -2.2 -3.8 hypothetical protein compare
Atu0400 -2.2 -5.2 orotate phosphoribosyltransferase compare
Atu1705 -2.2 -3.8 SEC-independent protein translocase protein compare
Atu0399 -2.2 -7.2 dihydroorotase compare
Atu2057 -2.1 -2.9 DNA helicase II compare
Atu3754 -2.1 -5.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4609 -2.1 -9.3 glycosyltransferase compare
Atu2796 -2.0 -9.8 precorrin-4 C11-methyltransferase compare
Atu1099 -2.0 -9.3 hypothetical protein compare
Atu4608 -2.0 -13.0 hypothetical protein compare
Atu4317 -2.0 -3.2 TetR family transcriptional regulator compare
Atu2802 -2.0 -8.6 precorrin-8X methylmutase compare
Atu1140 -2.0 -3.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2808 -2.0 -8.3 cobyric acid synthase compare
Atu1688 -2.0 -4.4 indole-3-glycerol-phosphate synthase compare
Atu1850 -2.0 -3.8 phosphoribosylformylglycinamidine synthetase II compare
Atu4471 -1.9 -9.6 ABC transporter substrate-binding protein compare
Atu2809 -1.9 -10.4 cobalamin biosynthesis protein compare
Atu1542 -1.9 -6.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2799 -1.9 -5.0 precorrin-6x reductase compare
Atu0977 -1.8 -4.2 serine protease DO-like protease compare
Atu1075 -1.8 -7.8 amidophosphoribosyltransferase compare
Atu4061 -1.8 -4.0 exopolysaccharide production repressor protein compare
Atu2807 -1.8 -7.4 cob(I)alamin adenosyltransferase compare
Atu4470 -1.7 -8.7 iron ABC transporter ATPase compare
Atu1891 -1.7 -3.3 cobalamin biosynthesis protein compare
Atu2804 -1.7 -10.0 cobaltochelatase subunit compare
Atu2722 -1.7 -7.0 porin compare
Atu4108 -1.7 -8.8 ribonuclease D compare
Atu4468 -1.7 -8.4 iron transport ABC transporter permease compare
Atu2650 -1.7 -9.7 glycerol-3-phosphate dehydrogenase compare
Atu3755 -1.7 -5.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1620 -1.7 -9.1 triosephosphate isomerase compare
Atu0361 -1.6 -3.9 transcriptional regulator compare
Atu0647 -1.6 -5.5 phosphoribosylamine--glycine ligase compare
Atu1845 -1.6 -3.7 phosphoribosylformylglycinamidine synthase I compare
Atu2805 -1.6 -6.1 cobalamin synthesis protein compare
Atu0978 -1.6 -7.8 two component response regulator compare
Atu1333 -1.6 -3.6 outer membrane protein compare
Atu2207 -1.6 -3.2 two component sensor kinase compare
Atu2684 -1.6 -1.9 hypothetical protein compare
Atu4469 -1.6 -3.1 iron ABC transporter permease compare
Atu3518 -1.6 -7.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0723 -1.5 -2.3 FAD dependent oxidoreductase compare
Atu0041 -1.5 -1.9 glutamine amidotransferase compare
Atu2058 -1.5 -4.0 hypothetical protein compare
Atu0979 -1.5 -8.3 two component sensor kinase compare
Atu4346 -1.5 -5.8 hypothetical protein compare
Atu1141 -1.5 -5.1 Phosphoribosylglycinamide synthetase compare
Atu4349 -1.4 -4.5 hypothetical protein compare
Atu2205 -1.4 -3.3 transcriptional regulator, MarR family compare
Atu1683 -1.4 -2.6 hypothetical protein compare
Atu0025 -1.4 -2.4 hypothetical protein compare
Atu2439 -1.4 -1.3 hypothetical protein compare
Atu0533 -1.4 -4.3 putative inhibitor of septum formation compare
Atu2793 -1.4 -5.9 cobyrinic acid a,c-diamide synthase compare
Atu3598 -1.3 -1.8 thiol:disulfide interchange protein compare
Atu3634 -1.3 -4.7 penicillin-binding protein dacf precursor compare
Atu2504 -1.3 -6.4 transcriptional regulator, GntR family compare
Atu1446 -1.3 -2.2 two component response regulator compare
Atu3794 -1.3 -5.4 FadR family transcriptional regulator compare
Atu2803 -1.3 -3.5 Cobalamin biosynthesis associated protein compare
Atu4345 -1.2 -5.4 hypothetical protein compare
Atu3740 -1.2 -6.1 fructose bisphosphate aldolase compare
Atu1447 -1.2 -2.3 two component sensor kinase compare
Atu1445 -1.2 -4.2 two component sensor kinase compare
Atu1686 -1.2 -7.7 peptidyl-prolyl cis-trans isomerse D compare
Atu2052 -1.2 -5.6 hypothetical protein compare
Atu2824 -1.2 -3.7 hypothetical protein compare
Atu1364 -1.2 -4.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3688 -1.2 -4.6 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu5125 -1.2 -6.3 GntR family transcriptional regulator compare
Atu0026 -1.1 -1.0 hypothetical protein compare
Atu2662 -1.1 -1.2 acetyltransferase compare
Atu3519 -1.1 -5.9 peptidyl-prolyl cis-trans isomerase compare
Atu4451 -1.1 -6.5 mannitol 2-dehydrogenase compare
Atu2036 -1.1 -7.7 acetolactate synthase III, large subunit compare
Atu1803 -1.1 -4.2 cold shock protein compare
Atu3707 -1.1 -2.5 phosphoserine aminotransferase compare
Atu0040 -1.1 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0346 -1.1 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0360 -1.1 -6.6 apolipoprotein N-acyltransferase compare
Atu1774 -1.1 -4.6 ABC transporter, substrate binding protein (peptide) compare
Atu2795 -1.1 -5.2 cobalamin biosynthetic protein compare
Atu3779 -1.1 -5.7 lytic murein transglycosylase compare
Atu2270 -1.1 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu1359 -1.0 -1.2 dnaK deletion suppressor protein compare
Atu3706 -1.0 -5.3 D-3-phosphoglycerate dehydrogenase compare
Atu2383 -1.0 -6.9 hypothetical protein compare
Atu3496 -1.0 -3.7 hypothetical protein compare
Atu1056 -1.0 -4.3 hypothetical protein compare
Atu1205 -1.0 -5.9 threonine dehydratase compare
Atu4711 -1.0 -3.8 two component sensor kinase compare
Atu1810 -1.0 -1.1 hypothetical protein compare
Atu4072 -1.0 -1.6 nodulation protein N compare
Atu0038 -1.0 -2.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0711 -0.9 -5.3 potassium uptake protein compare
Atu0043 -0.9 -1.7 imidazoleglycerol-phosphate dehydratase compare
Atu0578 -0.9 -4.4 FlbT post-transcriptional regulator of flagellin compare
Atu4674 -0.9 -5.7 GntR family transcriptional regulator compare
Atu1103 -0.9 -1.4 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3692 -0.9 -3.6 sigma factor compare
Atu1258 -0.9 -4.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu1739 -0.9 -3.8 permease compare
Atu1149 -0.9 -1.5 adenylate cyclase compare
Atu3517 -0.9 -4.2 acetyltransferase compare
Atu0046 -0.9 -4.7 hypothetical protein compare
Atu0576 -0.9 -5.7 flagellar hook-associated protein compare
Atu1685 -0.9 -0.8 hypothetical protein compare
Atu1327 -0.9 -2.9 NADH-ubiquinone oxidoreductase compare
Atu0923 -0.9 -4.0 hypothetical protein compare
Atu2832 -0.8 -1.7 tRNA modification GTPase compare
Atu0690 -0.8 -1.8 hypothetical protein compare
Atu1592 -0.8 -5.1 hypothetical protein compare
Atu3593 -0.8 -3.0 hypothetical protein compare
Atu1339 -0.8 -1.4 ribonuclease E compare
Atu0189 -0.8 -2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0280 -0.8 -1.6 hypothetical protein compare
Atu0036 -0.8 -2.2 hypothetical protein compare
Atu0897 -0.8 -6.3 protease II compare
Atu0161 -0.8 -5.7 biopolymer transport protein compare
Atu4350 -0.8 -4.7 hypothetical protein compare
Atu1444 -0.8 -4.6 nitrogen regulation protein compare
Atu2746 -0.8 -2.4 hypothetical protein compare
Atu3690 -0.8 -4.7 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu2615 -0.8 -4.9 hypothetical protein compare
Atu1435 -0.8 -2.1 hypothetical protein compare
Atu0062 -0.8 -4.8 transcriptional regulator, ROK family compare
Atu2789 -0.8 -2.8 hypothetical protein compare
Atu1588 -0.8 -4.1 homoserine dehydrogenase compare
Atu2768 -0.8 -2.7 hypothetical protein compare
Atu0537 -0.8 -3.2 histidinol dehydrogenase compare
Atu2555 -0.8 -2.1 L-lysine 2,3-aminomutase compare
Atu3689 -0.8 -4.9 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0710 -0.8 -3.9 magnesium/cobalt transport protein compare
Atu3727 -0.8 -2.6 hypothetical protein compare
Atu1076 -0.7 -2.3 colicin V production protein compare
Atu0163 -0.7 -3.1 tonB protein compare
Atu3687 -0.7 -5.9 TonB-dependent receptor compare
Atu3750 -0.7 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu3144 -0.7 -3.2 GntR family transcriptional regulator compare
Atu3423 -0.7 -1.5 hypothetical protein compare
Atu4344 -0.7 -5.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2616 -0.7 -3.9 hypothetical protein compare
Atu1163 -0.7 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3608 -0.7 -3.3 hypothetical protein compare
Atu1360 -0.7 -4.5 hypothetical protein compare
Atu0574 -0.7 -5.1 flagellar hook protein compare
Atu0101 -0.7 -2.2 cytochrome c compare
Atu1380 -0.7 -3.3 zinc metallopeptidase compare
Atu0516 -0.7 -2.6 chemotaxis receiver protein compare
Atu0562 -0.7 -2.5 flagellar motor switch protein FliN compare
Atu3691 -0.7 -3.1 iron (III) dicitrate ABC transporter ATPase compare
Atu0554 -0.7 -3.3 flagellar basal-body rod protein compare
Atu4050 -0.7 -2.0 UTP-glucose-1-phosphate uridylyltransferase compare
Atu2040 -0.7 -2.8 phosphoserine phosphatase compare
Atu3468 -0.7 -0.6 hypothetical protein compare
Atu0375 -0.7 -1.7 small heat shock protein compare
Atu8138 -0.7 -1.2 hypothetical protein compare
Atu4075 -0.7 -3.0 glycogen synthase compare
Atu0577 -0.7 -2.0 FLAF protein compare
Atu0201 -0.7 -1.4 hypothetical protein compare
Atu2797 -0.7 -2.7 cobalamin biosynthesis protein compare


Specific Phenotypes

For 9 genes in this experiment

For stress Calcium chloride dihydrate in Agrobacterium fabrum C58

For stress Calcium chloride dihydrate across organisms