Experiment set5IT018 for Agrobacterium fabrum C58

Compare to:

R2A with Thallium(I) acetate 0.05 mM

200 most important genes:

  gene name fitness t score description  
Atu0972 -3.6 -5.9 lipA protein compare
Atu2710 -3.4 -10.7 hypothetical protein compare
Atu1446 -2.5 -4.2 two component response regulator compare
Atu2684 -2.4 -2.8 hypothetical protein compare
Atu3468 -2.3 -1.6 hypothetical protein compare
Atu4072 -2.0 -3.0 nodulation protein N compare
Atu4882 -1.8 -3.8 hypothetical protein compare
Atu2067 -1.7 -1.4 hypothetical protein compare
Atu1688 -1.4 -4.2 indole-3-glycerol-phosphate synthase compare
Atu0346 -1.4 -3.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1307 -1.4 -4.8 dihydroorotase compare
Atu0434 -1.3 -3.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4502 -1.3 -5.5 cobalamin synthesis protein compare
Atu2199 -1.3 -9.3 permease conserved
Atu1028 -1.2 -2.4 hypothetical protein compare
Atu1484 -1.1 -3.1 transcriptional regulator compare
Atu1149 -1.1 -1.8 adenylate cyclase compare
Atu1687 -1.0 -4.3 anthranilate phosphoribosyltransferase compare
Atu8162 -1.0 -1.5 hypothetical protein compare
Atu2057 -1.0 -2.3 DNA helicase II compare
Atu0029 -1.0 -3.5 S-adenosylhomocysteine hydrolase compare
Atu1714 -1.0 -1.8 exonuclease III compare
Atu2713 -1.0 -7.0 ABC transporter, membrane spanning protein (thiamine) compare
Atu0876 -1.0 -2.1 superoxide dismutase compare
Atu0103 -0.9 -6.3 penicillin-binding protein compare
Atu0017 -0.9 -1.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1364 -0.9 -4.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2714 -0.9 -5.6 ABC transporter, substrate binding protein (thiamine) compare
Atu2380 -0.8 -2.4 hypothetical protein compare
Atu2712 -0.8 -3.5 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu4897 -0.8 -1.3 hypothetical protein compare
Atu4630 -0.8 -1.7 hypothetical protein compare
Atu5045 -0.8 -1.7 hypothetical protein compare
Atu8087 -0.8 -1.1 putative peptidoglycan binding protein compare
Atu1026 -0.8 -2.4 hypothetical protein compare
Atu4896 -0.8 -1.5 acetyltransferase compare
Atu3120 -0.8 -1.1 hypothetical protein compare
Atu1308 -0.8 -3.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3014 -0.7 -1.8 hypothetical protein compare
Atu4232 -0.7 -3.2 GntR family transcriptional regulator compare
Atu3018 -0.7 -2.6 hypothetical protein compare
Atu5088 -0.7 -1.3 hypothetical protein compare
Atu1339 -0.7 -2.1 ribonuclease E compare
Atu3009 -0.7 -1.0 exopolysaccharide production protein compare
Atu0184 -0.7 -1.2 glucokinase compare
Atu0031 -0.7 -1.2 PTS system, IIA component compare
Atu4792 -0.7 -1.6 hypothetical protein compare
Atu1739 -0.7 -2.7 permease compare
Atu0201 -0.7 -1.3 hypothetical protein compare
Atu8138 -0.6 -1.3 hypothetical protein compare
Atu0566 -0.6 -1.5 hypothetical protein compare
Atu1163 -0.6 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0039 -0.6 -1.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu5470 -0.6 -1.1 hypothetical protein compare
Atu1694 -0.6 -2.7 hypothetical protein compare
Atu1646 -0.6 -2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0463 -0.6 -1.8 hypothetical protein compare
Atu0295 -0.6 -2.5 hypothetical protein compare
Atu0105 -0.6 -1.4 hypothetical protein compare
Atu4346 -0.6 -2.9 hypothetical protein compare
Atu0922 -0.6 -1.8 hypothetical protein compare
Atu4501 -0.6 -3.7 hypothetical protein compare
Atu1445 -0.6 -3.1 two component sensor kinase compare
Atu4149 -0.6 -2.9 UDP-glucose 6-dehydrogenase compare
Atu4205 -0.6 -3.7 TetR family transcriptional regulator compare
Atu1629 -0.6 -0.9 transcriptional regulator, ArsR family compare
Atu3183 -0.5 -0.6 hypothetical protein compare
Atu3597 -0.5 -2.8 3-hydroxybutyryl-CoA dehydrogenase compare
Atu3121 -0.5 -0.9 cold shock protein compare
Atu0495 -0.5 -1.9 hypothetical protein compare
Atu2787 -0.5 -0.9 hypothetical protein compare
Atu2239 -0.5 -1.4 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3613 -0.5 -3.0 hypothetical protein compare
Atu5125 -0.5 -2.1 GntR family transcriptional regulator compare
Atu1131 -0.5 -3.5 outer membrane protein compare
Atu4050 -0.5 -1.5 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0538 -0.5 -1.5 hypothetical protein compare
Atu1968 -0.5 -1.3 hypothetical protein compare
Atu8161 -0.5 -1.2 hypothetical protein compare
Atu2804 -0.5 -3.3 cobaltochelatase subunit compare
Atu0188 -0.5 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2768 -0.5 -1.9 hypothetical protein compare
Atu0332 -0.5 -3.2 RNA polymerase sigma-54 factor compare
Atu1801 -0.5 -0.9 hypothetical protein compare
Atu2818 -0.5 -2.7 ABC transporter, membrane spanning protein (ribose) compare
Atu1678 -0.5 -2.3 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1851 -0.5 -1.6 BolA/YrbA family protein compare
Atu0470 -0.5 -1.3 hypothetical protein compare
Atu1620 -0.5 -3.1 triosephosphate isomerase compare
Atu2827 -0.5 -1.9 hypothetical protein compare
Atu1127 -0.5 -1.5 molybdopterin converting factor small subunit compare
Atu2582 -0.5 -2.3 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0272 -0.5 -1.7 transcriptional regulator, MarR family compare
Atu1103 -0.5 -1.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2799 -0.5 -2.3 precorrin-6x reductase compare
Atu1686 -0.5 -3.8 peptidyl-prolyl cis-trans isomerse D compare
Atu1225 -0.5 -0.9 hypothetical protein compare
Atu0749 -0.5 -1.5 biotin synthesis BioY protein compare
Atu3798 -0.5 -2.9 TetR family transcriptional regulator compare
Atu0845 -0.5 -1.6 hypothetical protein compare
Atu1373 -0.5 -2.6 hypothetical protein compare
Atu3773 -0.5 -1.5 hypothetical protein compare
Atu0925 -0.5 -1.5 hypothetical protein compare
Atu0225 -0.5 -0.6 hypothetical protein compare
Atu2289 -0.5 -3.3 anthranilate synthase component I and II compare
Atu5007 -0.5 -3.0 santhopine-responsive transcriptional repressor compare
Atu5424 -0.4 -3.4 oxidoreductase compare
Atu2807 -0.4 -2.5 cob(I)alamin adenosyltransferase compare
Atu4773 -0.4 -1.0 two component response regulator compare
Atu0115 -0.4 -0.6 hypothetical protein compare
Atu0920 -0.4 -1.7 hypothetical protein compare
Atu1780 -0.4 -2.8 ATP-dependent DNA helicase compare
Atu8032 -0.4 -1.6 hypothetical protein compare
Atu2777 -0.4 -3.4 hypothetical protein compare
Atu4873 -0.4 -2.3 TetR family transcriptional regulator compare
Atu1223 -0.4 -0.9 hypothetical protein compare
Atu0236 -0.4 -1.2 hypothetical protein compare
Atu0025 -0.4 -1.3 hypothetical protein compare
Atu3578 -0.4 -2.3 glycerol-3-phosphate dehydrogenase compare
Atu2633 -0.4 -0.9 RhtB family transporter compare
Atu8099 -0.4 -1.4 hypothetical protein compare
Atu0941 -0.4 -0.6 hypothetical protein compare
Atu2769 -0.4 -3.0 acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis compare
Atu0153 -0.4 -1.7 transcriptional regulator, Fur family compare
Atu2798 -0.4 -1.5 precorrin-6y methyltransferase compare
Atu0467 -0.4 -1.1 hypothetical protein compare
Atu0097 -0.4 -1.8 hypothetical protein compare
Atu0277 -0.4 -2.5 hypothetical protein compare
Atu4852 -0.4 -2.3 hypothetical protein compare
Atu1891 -0.4 -1.0 cobalamin biosynthesis protein compare
Atu1774 -0.4 -2.4 ABC transporter, substrate binding protein (peptide) compare
Atu2052 -0.4 -2.0 hypothetical protein compare
Atu5097 -0.4 -1.8 ATP-dependent DNA ligase compare
Atu1542 -0.4 -1.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2809 -0.4 -2.9 cobalamin biosynthesis protein compare
Atu2733 -0.4 -1.5 hypothetical protein compare
Atu6153 -0.4 -1.8 conserved hypothetical protein compare
Atu2193 -0.4 -0.5 hypothetical protein compare
Atu3668 -0.4 -1.5 siderophore biosynthesis protein compare
Atu4075 -0.4 -2.1 glycogen synthase compare
Atu4878 -0.4 -1.7 hypothetical protein compare
Atu3016 -0.4 -2.2 phosphoglyceromutase compare
Atu2129 -0.4 -1.7 hypothetical protein compare
Atu1285 -0.4 -2.0 metal dependent hydrolase compare
Atu1592 -0.4 -1.8 hypothetical protein compare
Atu3873 -0.4 -1.8 hypothetical protein compare
Atu4458 -0.4 -1.6 hypothetical protein compare
Atu3006 -0.4 -1.4 hypothetical protein compare
Atu4385 -0.4 -2.1 hypothetical protein compare
Atu0361 -0.4 -0.9 transcriptional regulator compare
Atu3416 -0.4 -1.8 ABC transporter substrate binding protein compare
Atu0971 -0.4 -1.7 two component sensor kinase compare
Atu1227 -0.4 -2.6 hypothetical protein compare
Atu2456 -0.4 -1.8 lactoylglutathione lyase compare
Atu3518 -0.4 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4055 -0.4 -2.3 endo-1,3-1,4-beta-glycanase compare
Atu0357 -0.4 -2.1 phosphate starvation inducible protein compare
Atu4893 -0.4 -1.9 hypothetical protein compare
Atu2215 -0.4 -2.4 hypothetical protein compare
Atu1004 -0.4 -1.0 hypothetical protein compare
Atu6114 -0.4 -1.1 hypothetical protein compare
Atu4061 -0.4 -1.5 exopolysaccharide production repressor protein compare
Atu0827 -0.4 -1.7 hypothetical protein compare
Atu2464 -0.4 -0.9 formyltetrahydrofolate deformylase compare
Atu2793 -0.4 -1.5 cobyrinic acid a,c-diamide synthase compare
Atu4556 -0.4 -2.4 LacI family transcriptional regulator compare
Atu0421 -0.4 -0.7 ABC transporter, membrane spanning protein compare
Atu0953 -0.4 -0.4 hypothetical protein compare
Atu0540 -0.4 -0.9 hypothetical protein compare
Atu4366 -0.4 -1.2 short chain dehydrogenase compare
Atu3692 -0.4 -2.1 sigma factor compare
Atu0791 -0.4 -1.6 transcriptional regulator, GntR family compare
Atu4869 -0.4 -1.7 hypothetical protein compare
Atu2590 -0.4 -2.3 hypothetical protein compare
Atu1329 -0.4 -2.7 leucyl/phenylalanyl-tRNA-protein transferase compare
Atu2420 -0.4 -1.9 hypothetical protein compare
Atu2803 -0.4 -1.4 Cobalamin biosynthesis associated protein compare
Atu4068 -0.4 -1.5 sarcosine oxidase delta subunit compare
Atu3368 -0.4 -1.8 periplasmic mannitol-binding protein compare
Atu1030 -0.4 -0.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4144 -0.4 -0.5 hypothetical protein compare
Atu2511 -0.4 -1.9 D-alanine aminotransferase compare
Atu3932 -0.4 -2.3 hypothetical protein compare
Atu2278 -0.4 -2.1 transcriptional regulator, ArsR family compare
Atu2478 -0.4 -1.4 hypothetical protein compare
Atu1850 -0.4 -1.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0751 -0.3 -1.8 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu3712 -0.3 -0.6 hypothetical protein compare
Atu2592 -0.3 -1.2 hypothetical protein compare
Atu1254 -0.3 -1.0 transcriptional regulator, ArsR family compare
Atu0477 -0.3 -0.8 hypothetical protein compare
Atu4419 -0.3 -1.8 LysR family transcriptional regulator compare
Atu1793 -0.3 -2.0 phosphatidylcholine synthase compare
Atu2566 -0.3 -1.8 thiamin biosynthesis ThiG compare
Atu4803 -0.3 -1.8 two component response regulator compare
Atu3011 -0.3 -0.9 ArsR family transcriptional regulator compare
Atu0846 -0.3 -2.0 transcriptional regulator, MarR family compare
Atu3015 -0.3 -1.5 hypothetical protein compare
Atu5183 -0.3 -2.2 hypothetical protein compare
Atu3001 -0.3 -0.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Thallium(I) acetate in Agrobacterium fabrum C58

For stress Thallium(I) acetate across organisms