Experiment set5IT016 for Agrobacterium fabrum C58

Compare to:

R2A with Aluminum chloride hydrate 0.3 mM

200 most important genes:

  gene name fitness t score description  
Atu0434 -3.8 -4.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1028 -2.4 -3.1 hypothetical protein compare
Atu0346 -2.3 -4.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2289 -2.2 -11.4 anthranilate synthase component I and II compare
Atu0017 -2.1 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1308 -2.1 -7.3 aspartate carbamoyl transferase catalytic subunit compare
Atu1687 -2.1 -5.8 anthranilate phosphoribosyltransferase compare
Atu0399 -2.0 -5.9 dihydroorotase compare
Atu4773 -2.0 -2.7 two component response regulator compare
Atu3469 -1.9 -3.2 phosphoglyceromutase compare
Atu0298 -1.8 -5.8 orotidine 5 compare
Atu0103 -1.7 -9.1 penicillin-binding protein compare
Atu2800 -1.7 -2.9 precorrin-3B C17-methyltransferase compare
Atu0400 -1.7 -4.8 orotate phosphoribosyltransferase compare
Atu1688 -1.7 -4.5 indole-3-glycerol-phosphate synthase compare
Atu0041 -1.6 -2.0 glutamine amidotransferase compare
Atu1030 -1.6 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1307 -1.4 -3.7 dihydroorotase compare
Atu5430 -1.3 -1.2 hypothetical protein compare
Atu2799 -1.3 -4.3 precorrin-6x reductase compare
Atu1686 -1.3 -7.7 peptidyl-prolyl cis-trans isomerse D compare
Atu0039 -1.3 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu4166 -1.3 -2.9 UDP-glucose 4-epimerase compare
Atu8054 -1.3 -1.0 hypothetical protein compare
Atu1182 -1.3 -2.2 hypothetical protein compare
Atu3008 -1.3 -1.2 hypothetical protein compare
Atu0486 -1.2 -4.4 dihydroorotate dehydrogenase compare
Atu8087 -1.2 -1.6 putative peptidoglycan binding protein compare
Atu1140 -1.2 -4.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2801 -1.2 -3.3 precorrin-2 C20 methyltransferase compare
Atu2728 -1.2 -4.7 beta (1-->2) glucan export ATP-binding protein compare
Atu2802 -1.2 -6.0 precorrin-8X methylmutase compare
Atu2554 -1.2 -1.9 lysyl-tRNA synthetase compare
Atu3121 -1.1 -1.7 cold shock protein compare
Atu1542 -1.1 -5.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1470 -1.1 -1.5 Camphor resistance protein compare
Atu8161 -1.1 -1.8 hypothetical protein compare
Atu2809 -1.1 -6.0 cobalamin biosynthesis protein compare
Atu2796 -1.1 -3.5 precorrin-4 C11-methyltransferase compare
Atu4317 -1.1 -3.7 TetR family transcriptional regulator compare
Atu0025 -1.1 -1.9 hypothetical protein compare
Atu2793 -1.1 -3.7 cobyrinic acid a,c-diamide synthase compare
Atu0031 -1.1 -1.6 PTS system, IIA component compare
Atu3750 -1.0 -3.5 thiamine-phosphate pyrophosphorylase compare
Atu4075 -1.0 -5.8 glycogen synthase compare
Atu2807 -1.0 -4.7 cob(I)alamin adenosyltransferase compare
Atu1359 -1.0 -1.2 dnaK deletion suppressor protein compare
Atu1141 -1.0 -4.8 Phosphoribosylglycinamide synthetase compare
Atu0185 -1.0 -4.6 methylglyoxal synthase compare
Atu1891 -1.0 -2.3 cobalamin biosynthesis protein compare
Atu1163 -1.0 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3598 -1.0 -2.0 thiol:disulfide interchange protein compare
Atu4890 -0.9 -1.8 IS426 transposase compare
Atu0361 -0.9 -1.3 transcriptional regulator compare
Atu0647 -0.9 -4.1 phosphoribosylamine--glycine ligase compare
Atu2207 -0.9 -3.4 two component sensor kinase compare
Atu0421 -0.9 -1.3 ABC transporter, membrane spanning protein compare
Atu2798 -0.9 -3.4 precorrin-6y methyltransferase compare
Atu0331 -0.9 -3.1 sigma-54 modulation protein compare
Atu3706 -0.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
Atu4108 -0.8 -4.8 ribonuclease D compare
Atu2808 -0.8 -3.6 cobyric acid synthase compare
Atu2650 -0.8 -6.1 glycerol-3-phosphate dehydrogenase compare
Atu3754 -0.8 -3.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2805 -0.8 -3.5 cobalamin synthesis protein compare
Atu2640 -0.8 -3.8 hypothetical protein compare
Atu3005 -0.8 -1.3 hypothetical protein compare
Atu2729 -0.8 -2.0 hypothetical protein compare
Atu2017 -0.8 -1.2 hypothetical protein compare
Atu1588 -0.8 -5.1 homoserine dehydrogenase compare
Atu0184 -0.8 -1.8 glucokinase compare
Atu2710 -0.8 -3.8 hypothetical protein compare
Atu1845 -0.8 -3.1 phosphoribosylformylglycinamidine synthase I compare
Atu0971 -0.8 -3.5 two component sensor kinase compare
Atu4072 -0.8 -2.0 nodulation protein N compare
Atu4893 -0.8 -2.5 hypothetical protein compare
Atu0972 -0.8 -4.2 lipA protein compare
Atu2555 -0.8 -2.5 L-lysine 2,3-aminomutase compare
Atu1535 -0.7 -1.0 cytochrome c oxidase, FixQ chain compare
Atu2040 -0.7 -3.9 phosphoserine phosphatase compare
Atu0726 -0.7 -4.7 ring hydroxylating dioxygenase, alpha-subunit compare
Atu3755 -0.7 -3.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu8012 -0.7 -0.8 hypothetical protein compare
Atu3481 -0.7 -4.2 enoyl-CoA hydratase compare
Atu2804 -0.7 -4.3 cobaltochelatase subunit compare
Atu5043 -0.7 -3.1 hypothetical protein compare
Atu0322 -0.7 -2.4 enoyl CoA hydratase compare
Atu1644 -0.7 -2.3 hypothetical protein compare
Atu1446 -0.7 -1.6 two component response regulator compare
Atu0401 -0.6 -3.1 fructokinase compare
Atu4711 -0.6 -3.1 two component sensor kinase compare
Atu4471 -0.6 -4.5 ABC transporter substrate-binding protein compare
Atu0535 -0.6 -2.7 hypothetical protein compare
Atu1844 -0.6 -2.1 Phosphoribosylformylglycinamidine synthetase compare
Atu1754 -0.6 -1.8 hypothetical protein compare
Atu2238 -0.6 -3.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2803 -0.6 -2.4 Cobalamin biosynthesis associated protein compare
Atu4470 -0.6 -4.1 iron ABC transporter ATPase compare
Atu3593 -0.6 -3.1 hypothetical protein compare
Atu2772 -0.6 -1.8 Invasion protein A compare
Atu0876 -0.6 -1.3 superoxide dismutase compare
Atu3727 -0.6 -2.1 hypothetical protein compare
Atu2036 -0.6 -4.1 acetolactate synthase III, large subunit compare
Atu1364 -0.6 -2.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2795 -0.6 -2.3 cobalamin biosynthetic protein compare
Atu3667 -0.6 -2.3 aspartate alpha-decarboxylase compare
Atu0769 -0.6 -1.0 protoheme IX farnesyltransferase compare
Atu2439 -0.6 -0.8 hypothetical protein compare
Atu1464 -0.6 -2.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0977 -0.6 -3.2 serine protease DO-like protease compare
Atu1223 -0.6 -1.0 hypothetical protein compare
Atu1739 -0.6 -3.0 permease compare
Atu1677 -0.6 -2.3 queuine tRNA-ribosyltransferase compare
Atu3634 -0.6 -2.5 penicillin-binding protein dacf precursor compare
Atu1518 -0.6 -2.5 transcriptional regulator, Fur family compare
Atu4468 -0.6 -3.6 iron transport ABC transporter permease compare
Atu1850 -0.6 -1.2 phosphoribosylformylglycinamidine synthetase II compare
Atu1327 -0.6 -2.2 NADH-ubiquinone oxidoreductase compare
Atu1847 -0.6 -1.4 hypothetical protein compare
Atu0795 -0.6 -1.8 hypothetical protein compare
Atu2057 -0.6 -1.3 DNA helicase II compare
Atu3678 -0.6 -2.8 siderophore biosynthesis protein compare
Atu4616 -0.5 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu1620 -0.5 -4.1 triosephosphate isomerase compare
Atu2073 -0.5 -1.9 membrane protein compare
Atu2620 -0.5 -0.9 hypothetical protein compare
Atu4873 -0.5 -3.1 TetR family transcriptional regulator compare
Atu1127 -0.5 -1.6 molybdopterin converting factor small subunit compare
Atu3485 -0.5 -3.8 short chain dehydrogenase compare
Atu1021 -0.5 -1.6 outer membrane protein compare
Atu8202 -0.5 -1.8 hypothetical protein compare
Atu3018 -0.5 -2.2 hypothetical protein compare
Atu2832 -0.5 -2.2 tRNA modification GTPase compare
Atu0598 -0.5 -3.6 phosphogluconate dehydratase compare
Atu2125 -0.5 -1.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu4892 -0.5 -3.7 hypothetical protein compare
Atu5142 -0.5 -1.6 hypothetical protein compare
Atu0925 -0.5 -1.2 hypothetical protein compare
Atu1075 -0.5 -3.0 amidophosphoribosyltransferase compare
Atu4605 -0.5 -1.9 IS3 family transposase compare
Atu0495 -0.5 -2.3 hypothetical protein compare
Atu0049 -0.5 -2.0 hypothetical protein compare
Atu8052 -0.5 -1.0 hypothetical protein compare
Atu5125 -0.5 -2.9 GntR family transcriptional regulator compare
Atu0767 -0.5 -3.0 cytochrome c oxidase subunit II compare
Atu5088 -0.5 -1.2 hypothetical protein compare
Atu2684 -0.5 -0.5 hypothetical protein compare
Atu6153 -0.5 -1.6 conserved hypothetical protein compare
Atu1435 -0.5 -1.8 hypothetical protein compare
Atu3013 -0.5 -2.4 hypothetical protein compare
Atu2205 -0.5 -2.0 transcriptional regulator, MarR family compare
Atu0727 -0.5 -2.9 ferredoxin I compare
Atu0422 -0.5 -0.6 ABC transporter, membrane spanning protein compare
Atu8190 -0.5 -2.3 hypothetical protein compare
Atu0236 -0.5 -1.3 hypothetical protein compare
Atu1983 -0.5 -1.8 hypothetical protein compare
Atu0846 -0.5 -1.3 transcriptional regulator, MarR family compare
Atu1676 -0.5 -2.7 para-aminobenzoate synthase component I compare
Atu3020 -0.5 -3.1 GntR family transcriptional regulator compare
Atu8138 -0.5 -0.8 hypothetical protein compare
Atu2683 -0.5 -1.0 hypothetical protein compare
Atu3482 -0.5 -2.7 pantoate--beta-alanine ligase compare
Atu4067 -0.5 -2.8 hypothetical protein compare
Atu3759 -0.5 -0.9 hypothetical protein compare
Atu1774 -0.5 -2.9 ABC transporter, substrate binding protein (peptide) compare
Atu0048 -0.5 -3.6 hypothetical protein compare
Atu0225 -0.5 -0.6 hypothetical protein compare
Atu1463 -0.5 -1.7 glycine cleavage system component H compare
Atu1725 -0.4 -2.5 hypothetical protein compare
Atu1468 -0.4 -2.1 hypothetical protein compare
Atu3572 -0.4 -3.2 transcriptional regulator compare
Atu0897 -0.4 -3.4 protease II compare
Atu4840 -0.4 -2.1 hypothetical protein compare
Atu1445 -0.4 -1.8 two component sensor kinase compare
Atu0288 -0.4 -3.5 hypothetical protein compare
Atu0503 -0.4 -3.4 enoyl-CoA hydratase compare
Atu1422 -0.4 -2.6 transcriptional regulator, MarR family compare
Atu1667 -0.4 -0.9 hypothetical protein compare
Atu5426 -0.4 -2.7 hypothetical protein compare
Atu3919 -0.4 -2.1 hypothetical protein compare
Atu2237 -0.4 -1.7 cytochrome c1 compare
Atu3144 -0.4 -1.8 GntR family transcriptional regulator compare
Atu2127 -0.4 -2.8 L-carnitine dehydratase compare
Atu3496 -0.4 -1.8 hypothetical protein compare
Atu0406 -0.4 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0189 -0.4 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2692 -0.4 -1.8 intracellular septation protein compare
Atu3483 -0.4 -1.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2191 -0.4 -2.0 transcriptional regulator, LysR family compare
Atu4514 -0.4 -2.3 RpiR family transcriptional regulator compare
Atu0842 -0.4 -0.7 hypothetical protein compare
Atu1189 -0.4 -1.6 hypothetical protein compare
Atu2113 -0.4 -1.1 N-acetylmuramoyl-L-alanine amidase compare
Atu4451 -0.4 -2.6 mannitol 2-dehydrogenase compare
Atu4142 -0.4 -2.1 proteinase compare
Atu2083 -0.4 -0.9 DNA repair protein RecN compare
Atu0285 -0.4 -2.8 hypothetical protein compare
Atu0595 -0.4 -3.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4099 -0.4 -1.7 hypothetical protein compare
Atu2384 -0.4 -2.3 transcriptional regulator, TetR family compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Aluminum chloride hydrate across organisms