Experiment set5IT007 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu1687 -2.9 -7.1 anthranilate phosphoribosyltransferase compare
Atu4217 -2.5 -2.4 TetR family transcriptional regulator compare
Atu0346 -2.5 -3.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1446 -2.4 -3.2 two component response regulator compare
Atu1030 -2.4 -2.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1307 -2.3 -6.0 dihydroorotase compare
Atu2289 -2.3 -10.0 anthranilate synthase component I and II compare
Atu0486 -2.2 -7.0 dihydroorotate dehydrogenase compare
Atu1308 -2.0 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu1688 -1.7 -3.1 indole-3-glycerol-phosphate synthase compare
Atu0298 -1.5 -5.4 orotidine 5 compare
Atu0361 -1.5 -4.4 transcriptional regulator compare
Atu0017 -1.5 -1.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4317 -1.4 -3.0 TetR family transcriptional regulator compare
Atu0399 -1.4 -6.0 dihydroorotase compare
Atu2728 -1.4 -6.1 beta (1-->2) glucan export ATP-binding protein compare
Atu1354 -1.4 -1.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3730 -1.3 -1.8 hypothetical protein compare
Atu0184 -1.2 -2.2 glucokinase compare
Atu0103 -1.2 -6.9 penicillin-binding protein compare
Atu1028 -1.2 -2.1 hypothetical protein compare
Atu0876 -1.2 -2.2 superoxide dismutase compare
Atu0647 -1.1 -4.7 phosphoribosylamine--glycine ligase compare
Atu1686 -1.1 -6.6 peptidyl-prolyl cis-trans isomerse D compare
Atu2800 -1.1 -1.5 precorrin-3B C17-methyltransferase compare
Atu1588 -1.1 -5.2 homoserine dehydrogenase compare
Atu0400 -1.1 -3.9 orotate phosphoribosyltransferase compare
Atu1844 -1.1 -2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu0434 -1.1 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0976 -1.0 -0.8 cycL protein compare
Atu1141 -1.0 -4.9 Phosphoribosylglycinamide synthetase compare
Atu0677 -1.0 -1.6 hypothetical protein compare
Atu0025 -1.0 -1.6 hypothetical protein compare
Atu0031 -1.0 -1.5 PTS system, IIA component compare
Atu2125 -1.0 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1542 -1.0 -4.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3754 -1.0 -6.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2017 -1.0 -1.2 hypothetical protein compare
Atu1685 -1.0 -0.9 hypothetical protein compare
Atu4075 -0.9 -3.9 glycogen synthase compare
Atu3750 -0.9 -2.8 thiamine-phosphate pyrophosphorylase compare
Atu5164 -0.9 -0.8 type IV secretion protein AvhB3 compare
Atu1140 -0.9 -4.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3598 -0.9 -1.3 thiol:disulfide interchange protein compare
Atu1904 -0.9 -1.4 transcriptional regulator compare
Atu5468 -0.9 -1.5 hypothetical protein compare
Atu8054 -0.9 -0.6 hypothetical protein compare
Atu0769 -0.8 -1.5 protoheme IX farnesyltransferase compare
Atu2802 -0.8 -4.2 precorrin-8X methylmutase compare
Atu2710 -0.8 -3.9 hypothetical protein compare
Atu0039 -0.8 -1.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu5485 -0.8 -1.2 hypothetical protein compare
Atu4773 -0.8 -0.9 two component response regulator compare
Atu1968 -0.8 -1.7 hypothetical protein compare
Atu0953 -0.8 -1.1 hypothetical protein compare
Atu2809 -0.8 -4.2 cobalamin biosynthesis protein compare
Atu8162 -0.8 -1.1 hypothetical protein compare
Atu1891 -0.7 -2.1 cobalamin biosynthesis protein compare
Atu1075 -0.7 -3.5 amidophosphoribosyltransferase compare
Atu1062 -0.7 -1.5 phosphatidylserine synthase compare
Atu2650 -0.7 -4.9 glycerol-3-phosphate dehydrogenase compare
Atu2798 -0.7 -2.7 precorrin-6y methyltransferase compare
Atu0846 -0.7 -2.3 transcriptional regulator, MarR family compare
Atu2796 -0.7 -2.4 precorrin-4 C11-methyltransferase compare
Atu8025 -0.7 -1.2 hypothetical protein compare
Atu4792 -0.7 -1.5 hypothetical protein compare
Atu2799 -0.7 -2.6 precorrin-6x reductase compare
Atu2040 -0.7 -2.0 phosphoserine phosphatase compare
Atu2793 -0.7 -2.2 cobyrinic acid a,c-diamide synthase compare
Atu0535 -0.7 -3.0 hypothetical protein compare
Atu3727 -0.7 -2.8 hypothetical protein compare
Atu0280 -0.7 -1.1 hypothetical protein compare
Atu2113 -0.7 -1.2 N-acetylmuramoyl-L-alanine amidase compare
Atu5125 -0.7 -2.4 GntR family transcriptional regulator compare
Atu2831 -0.7 -3.3 glucose inhibited division protein A compare
Atu1182 -0.7 -1.2 hypothetical protein compare
Atu0986 -0.7 -1.0 hypothetical protein compare
Atu0638 -0.7 -0.9 hypothetical protein compare
Atu2640 -0.6 -2.7 hypothetical protein compare
Atu0185 -0.6 -3.0 methylglyoxal synthase compare
Atu0036 -0.6 -1.9 hypothetical protein compare
Atu1570 -0.6 -0.8 hypothetical protein compare
Atu3634 -0.6 -2.4 penicillin-binding protein dacf precursor compare
Atu4108 -0.6 -2.9 ribonuclease D compare
Atu1589 -0.6 -3.5 aminotransferase, class I compare
Atu2057 -0.6 -1.1 DNA helicase II compare
Atu2807 -0.6 -3.9 cob(I)alamin adenosyltransferase compare
Atu3469 -0.6 -1.0 phosphoglyceromutase compare
Atu1364 -0.6 -2.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0640 -0.6 -1.2 hypothetical protein compare
Atu4527 -0.6 -1.1 hypothetical protein compare
Atu2578 -0.6 -1.7 cAMP-dependent protein kinase regulatory subunit compare
Atu2804 -0.6 -4.0 cobaltochelatase subunit compare
Atu3008 -0.6 -0.6 hypothetical protein compare
Atu3706 -0.6 -3.5 D-3-phosphoglycerate dehydrogenase compare
Atu2270 -0.6 -1.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu0598 -0.6 -3.2 phosphogluconate dehydratase compare
Atu8012 -0.6 -1.3 hypothetical protein compare
Atu3036 -0.6 -2.5 dipeptide ABC transporter permease compare
Atu8063 -0.6 -1.5 hypothetical protein compare
Atu0354 -0.6 -1.0 ferric uptake regulator compare
Atu2805 -0.6 -2.8 cobalamin synthesis protein compare
Atu3289 -0.6 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu5152 -0.6 -1.1 hypothetical protein compare
Atu1190 -0.6 -2.3 hypothetical protein compare
Atu4869 -0.6 -2.1 hypothetical protein compare
Atu3032 -0.6 -1.9 hypothetical protein compare
Atu3755 -0.6 -2.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4873 -0.6 -2.9 TetR family transcriptional regulator compare
Atu1439 -0.6 -1.3 hypothetical protein compare
Atu2232 -0.6 -2.4 ATP-dependent Clp protease adaptor protein ClpS compare
Atu2073 -0.6 -2.0 membrane protein compare
Atu0419 -0.6 -1.2 two component sensor kinase compare
Atu3466 -0.6 -1.8 ArsR family transcriptional regulator compare
Atu1291 -0.6 -1.4 hypothetical protein compare
Atu5486 -0.5 -2.5 hypothetical protein compare
Atu4779 -0.5 -1.6 hypothetical protein compare
Atu3468 -0.5 -0.5 hypothetical protein compare
Atu0777 -0.5 -0.6 hypothetical protein compare
Atu1355 -0.5 -2.3 hypothetical protein compare
Atu3429 -0.5 -0.9 hypothetical protein compare
Atu0925 -0.5 -1.7 hypothetical protein compare
Atu1607 -0.5 -1.5 DNA repair protein compare
Atu4072 -0.5 -1.2 nodulation protein N compare
Atu2554 -0.5 -0.6 lysyl-tRNA synthetase compare
Atu2584 -0.5 -1.3 hypothetical protein compare
Atu1503 -0.5 -0.7 hypothetical protein compare
Atu2450 -0.5 -1.6 hypothetical protein compare
Atu4144 -0.5 -0.7 hypothetical protein compare
Atu3067 -0.5 -2.5 hypothetical protein compare
Atu3075 -0.5 -3.7 TetR family transcriptional regulator compare
Atu8138 -0.5 -0.7 hypothetical protein compare
Atu1634 -0.5 -1.0 hypothetical protein compare
Atu2036 -0.5 -3.8 acetolactate synthase III, large subunit compare
Atu0540 -0.5 -1.7 hypothetical protein compare
Atu0038 -0.5 -2.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1714 -0.5 -1.0 exonuclease III compare
Atu2684 -0.5 -0.7 hypothetical protein compare
Atu3593 -0.5 -2.3 hypothetical protein compare
Atu0063 -0.5 -1.9 ABC transporter, substrate binding protein (sugar) compare
Atu1850 -0.5 -1.5 phosphoribosylformylglycinamidine synthetase II compare
Atu4837 -0.5 -2.5 hypothetical protein compare
Atu0671 -0.5 -1.7 hypothetical protein compare
Atu3486 -0.5 -1.3 DeoR family transcriptional regulator compare
Atu4874 -0.5 -2.6 hypothetical protein compare
Atu2537 -0.5 -2.2 transcriptional regulator, TetR family compare
Atu3485 -0.5 -2.9 short chain dehydrogenase compare
Atu1620 -0.5 -3.4 triosephosphate isomerase compare
Atu1480 -0.5 -2.0 hypothetical protein compare
Atu2083 -0.5 -1.0 DNA repair protein RecN compare
Atu8158 -0.5 -0.9 hypothetical protein compare
Atu1056 -0.5 -2.4 hypothetical protein compare
Atu2344 -0.5 -0.9 lactoylglutathione lyase compare
Atu6153 -0.5 -1.4 conserved hypothetical protein compare
Atu1578 -0.5 -2.7 ABC transporter, membrane spanning protein (amino acid) compare
Atu4840 -0.5 -2.4 hypothetical protein compare
Atu3047 -0.5 -2.0 oligopeptide ABC transporter permease compare
Atu1546 -0.5 -1.6 transcriptional regulator, MerR family compare
Atu0941 -0.5 -0.6 hypothetical protein compare
Atu3050 -0.5 -3.2 AgaE protein compare
Atu2803 -0.5 -1.3 Cobalamin biosynthesis associated protein compare
Atu3129 -0.5 -2.7 polygalacturonase-like protein compare
Atu8118 -0.5 -1.9 putative universal stress protein compare
Atu2028 -0.5 -1.0 transcriptional regulator, ArsR family compare
Atu6186 -0.5 -1.5 virA/G regulated protein compare
Atu5107 -0.5 -1.4 hypothetical protein compare
Atu5046 -0.5 -1.8 hypothetical protein compare
Atu0062 -0.4 -1.8 transcriptional regulator, ROK family compare
Atu0886 -0.4 -0.9 hypothetical protein compare
Atu1177 -0.4 -1.7 hypothetical protein compare
Atu1021 -0.4 -1.4 outer membrane protein compare
Atu0727 -0.4 -2.9 ferredoxin I compare
Atu3537 -0.4 -1.7 hypothetical protein compare
Atu4819 -0.4 -2.2 hypothetical protein compare
Atu3775 -0.4 -1.5 hypothetical protein compare
Atu2456 -0.4 -1.6 lactoylglutathione lyase compare
Atu0972 -0.4 -2.2 lipA protein compare
Atu4887 -0.4 -1.9 hypothetical protein compare
Atu3048 -0.4 -2.5 oligopeptide ABC transporter permease compare
Atu2808 -0.4 -2.1 cobyric acid synthase compare
Atu2472 -0.4 -0.7 hypothetical protein compare
Atu4306 -0.4 -1.2 two component response regulator compare
Atu1580 -0.4 -2.4 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu1380 -0.4 -2.1 zinc metallopeptidase compare
Atu0659 -0.4 -1.4 NTP pyrophosphohydrolase, MutT family compare
Atu3604 -0.4 -1.4 hypoxanthine phosphoribosyltransferase compare
Atu8184 -0.4 -1.8 hypothetical protein compare
Atu0319 -0.4 -0.7 ubiquinone biosynthesis protein compare
Atu1252 -0.4 -1.8 hypothetical protein compare
Atu1225 -0.4 -0.8 hypothetical protein compare
Atu4418 -0.4 -1.4 glutaryl-CoA dehydrogenase compare
Atu0344 -0.4 -1.6 hypothetical protein compare
Atu6125 -0.4 -1.7 conjugative transfer protein, Dtr system compare
Atu3313 -0.4 -1.3 hypothetical protein compare
Atu2123 -0.4 -1.6 methylenetetrahydrofolate reductase compare
Atu0962 -0.4 -2.8 hypothetical protein compare
Atu3912 -0.4 -2.7 hypothetical protein compare
Atu0322 -0.4 -2.3 enoyl CoA hydratase compare
Atu1149 -0.4 -0.4 adenylate cyclase compare
Atu4470 -0.4 -2.7 iron ABC transporter ATPase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a_control experiments