| | gene | name | fitness | t score | description | |
|---|
| b1292 | sapC | -4.6 | -4.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3035 | tolC | -4.5 | -12.0 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1863 | ruvC | -4.4 | -5.1 | Holliday junction resolvase (NCBI) | compare |
| b0737 | tolQ | -4.2 | -5.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3839 | tatC | -4.1 | -13.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0726 | sucA | -4.0 | -6.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0437 | clpP | -3.9 | -10.2 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0222 | lpcA | -3.5 | -6.1 | phosphoheptose isomerase (NCBI) | compare |
| b1293 | sapB | -3.4 | -2.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2188 | yejM | -3.3 | -14.2 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0738 | tolR | -3.2 | -5.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3613 | yibP | -3.2 | -9.2 | putative membrane protein (VIMSS) | compare |
| b2498 | upp | -3.2 | -5.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0053 | surA | -3.1 | -10.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2894 | xerD | -3.1 | -2.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0912 | ihfB | -3.1 | -7.6 | integration host factor subunit beta (NCBI) | compare |
| b0019 | nhaA | -2.9 | -12.8 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b3405 | ompR | -2.9 | -7.1 | osmolarity response regulator (NCBI) | compare |
| b3792 | wzxE | -2.9 | -12.8 | O-antigen translocase (NCBI) | compare |
| b0739 | tolA | -2.8 | -6.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3619 | rfaD | -2.8 | -7.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2830 | nudH | -2.8 | -2.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0149 | mrcB | -2.7 | -19.7 | penicillin-binding protein 1b (NCBI) | compare |
| b0438 | clpX | -2.7 | -10.3 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0890 | ftsK | -2.7 | -6.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0740 | tolB | -2.7 | -7.1 | translocation protein TolB precursor (NCBI) | compare |
| b3979 | thrT | -2.6 | -0.9 | tRNA-Thr (NCBI) | compare |
| b0439 | lon | -2.6 | -8.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2168 | fruK | -2.6 | -2.5 | 1-phosphofructokinase (NCBI) | compare |
| b1861 | ruvA | -2.6 | -3.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3375 | yhfR | -2.5 | -11.9 | putative transcriptional regulator (VIMSS) | compare |
| b1192 | ldcA | -2.5 | -8.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b0688 | pgm | -2.5 | -5.6 | phosphoglucomutase (NCBI) | compare |
| b0114 | aceE | -2.5 | -2.9 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1290 | sapF | -2.4 | -3.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3398 | yrfF | -2.4 | -5.4 | predicted inner membrane protein (NCBI) | compare |
| b3621 | rfaC | -2.4 | -9.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3620 | rfaF | -2.3 | -8.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3052 | rfaE | -2.3 | -8.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2846 | yqeH | -2.2 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2512 | yfgL | -2.2 | -7.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3290 | trkA | -2.2 | -1.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2297 | pta | -2.2 | -1.5 | phosphate acetyltransferase (NCBI) | compare |
| b0741 | pal | -2.2 | -5.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1830 | prc | -2.2 | -8.5 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2912 | ygfA | -2.2 | -4.8 | putative ligase (VIMSS) | compare |
| b3386 | rpe | -2.2 | -1.5 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3236 | mdh | -2.1 | -10.7 | malate dehydrogenase (NCBI) | compare |
| b1236 | galU | -2.0 | -6.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3150 | yraP | -2.0 | -10.8 | hypothetical protein (NCBI) | compare |
| b2620 | smpB | -2.0 | -1.9 | SsrA-binding protein (NCBI) | compare |
| b0630 | lipB | -1.9 | -3.1 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1105 | ycfM | -1.9 | -4.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4146 | yjeK | -1.9 | -4.4 | predicted lysine aminomutase (NCBI) | compare |
| b3075 | ebgR | -1.9 | -6.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0730 | mngR | -1.8 | -3.2 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b0200 | gmhB | -1.8 | -2.4 | hypothetical protein (NCBI) | compare |
| b4239 | treC | -1.8 | -4.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b3791 | rffA | -1.8 | -9.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2934 | cmtB | -1.8 | -1.1 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1258 | yciF | -1.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b0051 | ksgA | -1.7 | -6.4 | dimethyladenosine transferase (NCBI) | compare |
| b3438 | gntR | -1.7 | -6.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4481 | rffT | -1.7 | -7.9 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3204 | ptsN | -1.7 | -5.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0142 | folK | -1.7 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3962 | udhA | -1.7 | -7.5 | putative oxidoreductase (VIMSS) | compare |
| b3229 | sspA | -1.7 | -5.5 | stringent starvation protein A (NCBI) | compare |
| b1860 | ruvB | -1.7 | -1.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b2064 | asmA | -1.7 | -7.4 | predicted assembly protein (NCBI) | compare |
| b1712 | ihfA | -1.6 | -2.2 | integration host factor subunit alpha (NCBI) | compare |
| b4155 | yjeA | -1.6 | -1.1 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3237 | argR | -1.6 | -6.1 | arginine repressor (NCBI) | compare |
| b0088 | murD | -1.6 | -2.7 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3609 | secB | -1.6 | -3.2 | export protein SecB (NCBI) | compare |
| b0080 | fruR | -1.6 | -5.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0767 | ybhE | -1.6 | -3.8 | 6-phosphogluconolactonase (NCBI) | compare |
| b3838 | tatB | -1.5 | -5.3 | sec-independent translocase (NCBI) | compare |
| b0018 | mokC | -1.5 | -2.1 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1084 | rne | -1.5 | -5.2 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1748 | astC | -1.5 | -5.7 | succinylornithine transaminase, PLP-dependent (NCBI) | compare |
| b3912 | cpxR | -1.5 | -8.5 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b2808 | gcvA | -1.5 | -5.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2741 | rpoS | -1.5 | -7.5 | RNA polymerase sigma factor (NCBI) | compare |
| b2518 | ndk | -1.5 | -2.5 | nucleoside diphosphate kinase (NCBI) | compare |
| b4214 | cysQ | -1.4 | -10.4 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b2501 | ppk | -1.4 | -7.6 | polyphosphate kinase (NCBI) | compare |
| b3194 | yrbE | -1.3 | -7.5 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.6 | expressed protein (RefSeq) | compare |
| b3426 | glpD | -1.3 | -5.1 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b4139 | aspA | -1.3 | -8.7 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b4699 | fnrS | -1.3 | -1.1 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3728 | pstS | -1.3 | -4.5 | phosphate transporter subunit (NCBI) | compare |
| b4175 | hflC | -1.3 | -9.0 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b2215 | ompC | -1.3 | -7.3 | outer membrane porin protein C (NCBI) | compare |
| b0819 | ybiS | -1.3 | -6.3 | hypothetical protein (NCBI) | compare |
| b0724 | sdhB | -1.3 | -5.7 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1130 | phoP | -1.3 | -1.5 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0720 | gltA | -1.3 | -7.1 | citrate synthase (NCBI) | compare |
| b0928 | aspC | -1.3 | -6.3 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1747 | astA | -1.3 | -6.7 | arginine succinyltransferase (NCBI) | compare |
| b4202 | rpsR | -1.3 | -1.9 | 30S ribosomal protein S18 (NCBI) | compare |
| b3811 | xerC | -1.3 | -2.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2313 | cvpA | -1.3 | -5.7 | membrane protein required for colicin V production (NCBI) | compare |
| b3790 | rffC | -1.3 | -5.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b4203 | rplI | -1.3 | -4.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b0683 | fur | -1.2 | -2.1 | ferric uptake regulator (NCBI) | compare |
| b2504 | yfgG | -1.2 | -1.9 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3465 | yhhF | -1.2 | -4.9 | predicted methyltransferase (NCBI) | compare |
| b3404 | envZ | -1.2 | -7.6 | osmolarity sensor protein (NCBI) | compare |
| b2287 | nuoB | -1.2 | -3.9 | NADH dehydrogenase subunit B (NCBI) | compare |
| b4603 | rseX | -1.2 | -0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1677 | lpp | -1.2 | -3.4 | murein lipoprotein (NCBI) | compare |
| b1745 | astB | -1.2 | -6.4 | succinylarginine dihydrolase (NCBI) | compare |
| b1744 | astE | -1.2 | -6.2 | succinylglutamate desuccinylase (NCBI) | compare |
| b0161 | degP | -1.2 | -5.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0685 | ybfE | -1.2 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -1.2 | -4.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2762 | cysH | -1.1 | -6.2 | phosphoadenosine phosphosulfate reductase (NCBI) | compare |
| b4172 | hfq | -1.1 | -1.4 | RNA-binding protein Hfq (NCBI) | compare |
| b1175 | minD | -1.1 | -4.9 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2318 | truA | -1.1 | -2.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3652 | recG | -1.1 | -7.7 | ATP-dependent DNA helicase (NCBI) | compare |
| b4174 | hflK | -1.1 | -7.3 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b2017 | yefM | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3630 | rfaP | -1.1 | -7.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3870 | glnA | -1.1 | -2.9 | glutamine synthetase (NCBI) | compare |
| b3163 | nlpI | -1.1 | -5.6 | hypothetical protein (NCBI) | compare |
| b2820 | recB | -1.1 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0677 | nagA | -1.1 | -4.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0441 | ppiD | -1.1 | -9.0 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b0585 | fes | -1.1 | -4.6 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b3725 | pstB | -1.1 | -1.0 | phosphate transporter subunit (NCBI) | compare |
| b3199 | yrbK | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | -1.1 | -8.5 | glucosyltransferase I (NCBI) | compare |
| b1746 | astD | -1.1 | -5.9 | succinylglutamic semialdehyde dehydrogenase (NCBI) | compare |
| b2569 | lepA | -1.1 | -3.7 | GTP-binding protein LepA (NCBI) | compare |
| b4345 | mcrC | -1.0 | -1.0 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b3466 | yhhL | -1.0 | -3.9 | conserved inner membrane protein (NCBI) | compare |
| b4593 | ymgI | -1.0 | -0.9 | hypothetical protein (RefSeq) | compare |
| b3169 | nusA | -1.0 | -2.4 | transcription elongation factor NusA (NCBI) | compare |
| b3794 | rffM | -1.0 | -5.9 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b4557 | yidD | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| b0949 | uup | -1.0 | -4.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3027 | ygiZ | -1.0 | -0.6 | conserved inner membrane protein (NCBI) | compare |
| b4179 | vacB | -1.0 | -4.4 | putative enzyme (VIMSS) | compare |
| b3844 | fre | -1.0 | -4.2 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2952 | yggT | -1.0 | -4.0 | predicted inner membrane protein (NCBI) | compare |
| b2277 | nuoM | -1.0 | -4.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0990 | cspG | -0.9 | -1.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1545 | pinQ | -0.9 | -0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1249 | cls | -0.9 | -5.1 | cardiolipin synthetase (NCBI) | compare |
| b3786 | rffE | -0.9 | -7.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3026 | qseC | -0.9 | -2.9 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2110 | yehC | -0.9 | -1.2 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b1160 | elbA | -0.9 | -1.0 | hypothetical protein (NCBI) | compare |
| b0406 | tgt | -0.9 | -4.3 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3849 | trkH | -0.9 | -6.1 | potassium transporter (NCBI) | compare |
| b3787 | rffD | -0.9 | -6.6 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3784 | rfe | -0.9 | -6.6 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1187 | fadR | -0.9 | -2.8 | fatty acid metabolism regulator (NCBI) | compare |
| b3933 | ftsN | -0.9 | -5.1 | essential cell division protein (NCBI) | compare |
| b0926 | ycbK | -0.9 | -3.5 | hypothetical protein (NCBI) | compare |
| b1848 | yebG | -0.9 | -1.5 | conserved protein regulated by LexA (NCBI) | compare |
| b2937 | speB | -0.9 | -5.0 | agmatinase (NCBI) | compare |
| b3842 | rfaH | -0.9 | -3.3 | transcriptional activator RfaH (NCBI) | compare |
| b4041 | plsB | -0.9 | -2.0 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2051 | wcaH | -0.9 | -2.0 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b1129 | phoQ | -0.9 | -1.8 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2346 | vacJ | -0.9 | -5.6 | predicted lipoprotein (NCBI) | compare |
| b4458 | oxyS | -0.9 | -1.5 | global regulatory RNA (NCBI) | compare |
| b2764 | cysJ | -0.9 | -5.2 | sulfite reductase, alpha subunit, flavoprotein (NCBI) | compare |
| b2363 | yfdT | -0.9 | -2.6 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1176 | minC | -0.9 | -3.0 | septum formation inhibitor (NCBI) | compare |
| b3437 | gntK | -0.8 | -3.7 | gluconokinase 2, thermoresistant (VIMSS) | compare |
| b1423 | ydcJ | -0.8 | -3.5 | hypothetical protein (NCBI) | compare |
| b3247 | cafA | -0.8 | -6.6 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b2513 | yfgM | -0.8 | -4.6 | hypothetical protein (NCBI) | compare |
| b3195 | yrbF | -0.8 | -6.7 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2340 | sixA | -0.8 | -2.6 | phosphohistidine phosphatase (NCBI) | compare |
| b3846 | fadB | -0.8 | -6.4 | fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) | compare |
| b0125 | hpt | -0.8 | -4.7 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2175 | spr | -0.8 | -2.8 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0721 | sdhC | -0.8 | -2.6 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1693 | aroD | -0.8 | -4.7 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1291 | sapD | -0.8 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0564 | appY | -0.8 | -0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0407 | yajC | -0.8 | -2.1 | preprotein translocase subunit YajC (NCBI) | compare |
| b3601 | mtlR | -0.8 | -4.7 | DNA-binding repressor (NCBI) | compare |
| b3390 | aroK | -0.8 | -1.5 | shikimate kinase I (NCBI) | compare |
| b0989 | cspH | -0.8 | -2.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b1235 | rssB | -0.8 | -3.8 | response regulator of RpoS (NCBI) | compare |
| b3727 | pstC | -0.8 | -4.4 | phosphate transporter subunit (NCBI) | compare |
| b4178 | yjeB | -0.8 | -4.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3389 | aroB | -0.8 | -5.8 | 3-dehydroquinate synthase (NCBI) | compare |
| b3281 | aroE | -0.8 | -6.6 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3463 | ftsE | -0.8 | -0.5 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2750 | cysC | -0.8 | -4.0 | adenylylsulfate kinase (NCBI) | compare |
| b2276 | nuoN | -0.8 | -3.0 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3469 | zntA | -0.7 | -4.8 | zinc, cobalt and lead efflux system (NCBI) | compare |