Experiment set57IT044 for Escherichia coli BW25113

Compare to:

Ying_OrganicAcid7 rep B; time point 3

Genes with specific phenotypes:

  gene name fitness t score description  
b1285 gmr -2.5 -9.8 modulator of Rnase II stability (NCBI) compare
b4054 tyrB -2.4 -11.5 tyrosine aminotransferase, tyrosine-repressible, PLP-dependent (NCBI) compare
b1702 pps -2.3 -13.8 phosphoenolpyruvate synthase (NCBI) conserved
b3232 yhcM -2.3 -12.2 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b3528 dctA -1.7 -10.9 C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) conserved
b3572 avtA -1.7 -11.7 valine--pyruvate transaminase (NCBI) compare
b2029 gnd -1.6 -8.8 6-phosphogluconate dehydrogenase (NCBI) compare
b2603 yfiR -1.5 -8.6 hypothetical protein (NCBI) compare
b4125 dcuS -1.3 -9.7 sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration (NCBI) compare
b4124 dcuR -1.1 -7.0 DNA-binding response regulator in two-component regulatory system with DcuS (NCBI) conserved
b3966 btuB -1.0 -8.8 vitamin B12/cobalamin outer membrane transporter (NCBI) compare
b3917 sbp -1.0 -7.5 sulfate transporter subunit (NCBI) compare
b1191 b1191 +1.2 6.8 orf, hypothetical protein (VIMSS) compare
b1294 sapA +1.4 7.8 predicted antimicrobial peptide transporter subunit (NCBI) compare
b1190 dadX +2.2 13.3 alanine racemase (NCBI) compare
b1422 ydcI +2.7 17.8 putative transcriptional regulator LYSR-type (VIMSS) compare


Specific phenotypes for carbon source Ying_OrganicAcid7 across organisms