Experiment set57IT043 for Escherichia coli BW25113

Compare to:

Ying_OrganicAcid7 rep A; time point 3

Genes with specific phenotypes:

  gene name fitness t score description  
b4054 tyrB -3.2 -12.9 tyrosine aminotransferase, tyrosine-repressible, PLP-dependent (NCBI) compare
b1285 gmr -3.1 -9.6 modulator of Rnase II stability (NCBI) compare
b1702 pps -2.4 -10.8 phosphoenolpyruvate synthase (NCBI) conserved
b3232 yhcM -2.1 -11.0 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b3528 dctA -1.9 -9.9 C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) conserved
b2603 yfiR -1.8 -8.2 hypothetical protein (NCBI) compare
b2029 gnd -1.8 -9.0 6-phosphogluconate dehydrogenase (NCBI) compare
b4125 dcuS -1.7 -10.2 sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration (NCBI) compare
b3572 avtA -1.6 -10.4 valine--pyruvate transaminase (NCBI) compare
b4124 dcuR -1.4 -7.7 DNA-binding response regulator in two-component regulatory system with DcuS (NCBI) conserved
b0189 yaeO -1.4 -5.2 orf, hypothetical protein (VIMSS) compare
b3917 sbp -1.1 -8.3 sulfate transporter subunit (NCBI) compare
b1479 sfcA -1.1 -5.6 NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) compare
b0334 prpD -1.0 -5.4 2-methylcitrate dehydratase (NCBI) compare
b3966 btuB -1.0 -8.5 vitamin B12/cobalamin outer membrane transporter (NCBI) compare
b4030 yjbA +1.4 9.7 phosphate-starvation-inducible protein PsiE (NCBI) compare
b1294 sapA +1.5 7.0 predicted antimicrobial peptide transporter subunit (NCBI) compare
b1422 ydcI +2.1 13.3 putative transcriptional regulator LYSR-type (VIMSS) compare
b1190 dadX +2.2 12.8 alanine racemase (NCBI) compare


Specific phenotypes for carbon source Ying_OrganicAcid7 across organisms