Experiment set57IT040 for Escherichia coli BW25113

Compare to:

Ying_AminoAcid20 rep A; time point 3

Genes with specific phenotypes:

  gene name fitness t score description  
b2584 yfiQ -3.1 -13.7 fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit (NCBI) compare
b0121 speE -2.2 -6.3 spermidine synthase (NCBI) compare
b4208 cycA -2.1 -10.7 D-alanine/D-serine/glycine transporter (NCBI) compare
b3601 mtlR -1.9 -8.5 DNA-binding repressor (NCBI) compare
b0120 speD -1.7 -8.9 S-adenosylmethionine decarboxylase proenzyme (NCBI) compare
b1190 dadX -1.7 -5.8 alanine racemase (NCBI) compare
b3708 tnaA -1.6 -12.8 tryptophanase (VIMSS) compare
b1680 sufS -1.5 -7.2 selenocysteine lyase (NCBI) compare
b1611 fumC -1.5 -8.2 fumarate hydratase (NCBI) conserved
b1015 putP -1.4 -7.7 proline:sodium symporter (NCBI) conserved
b1285 gmr -1.4 -6.4 modulator of Rnase II stability (NCBI) compare
b1014 putA -1.3 -9.6 fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (NCBI) conserved
b3232 yhcM -1.2 -7.2 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) compare
b2603 yfiR -1.2 -5.8 hypothetical protein (NCBI) compare
b1683 ynhE -1.1 -7.0 orf, hypothetical protein (VIMSS) compare
b3709 tnaB -1.0 -9.0 tryptophan transporter of low affinity (NCBI) compare
b1188 ycgB +1.2 7.0 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1422 ydcI +1.5 7.4 putative transcriptional regulator LYSR-type (VIMSS) compare


Specific phenotypes for carbon source Ying_AminoAcid20 across organisms