| | gene | name | fitness | t score | description | |
|---|
| b3261 | fis | +2.8 | 10.5 | DNA-binding protein Fis (NCBI) | compare |
| b3753 | rbsR | +2.0 | 17.8 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b3229 | sspA | +2.0 | 9.7 | stringent starvation protein A (NCBI) | compare |
| b1823 | cspC | +1.9 | 4.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b1831 | proQ | +1.9 | 6.0 | putative solute/DNA competence effector (NCBI) | compare |
| b0014 | dnaK | +1.5 | 6.4 | molecular chaperone DnaK (NCBI) | compare |
| b1095 | fabF | +1.5 | 11.5 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1422 | ydcI | +1.5 | 7.4 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b1822 | rrmA | +1.3 | 2.8 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b0240 | crl | +1.3 | 8.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1188 | ycgB | +1.2 | 7.0 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b3260 | dusB | +1.2 | 2.9 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1038 | csgF | +1.2 | 4.2 | predicted transport protein (NCBI) | compare |
| b4552 | yrhC | +1.2 | 1.7 | no description | compare |
| b1783 | yeaG | +1.1 | 6.5 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b0382 | yaiB | +1.1 | 7.4 | hypothetical protein (NCBI) | compare |
| b3752 | rbsK | +1.1 | 6.6 | ribokinase (NCBI) | compare |
| b1784 | yeaH | +1.1 | 5.4 | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b4450 | arcZ | +1.0 | 4.5 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b4655 | ythA | +1.0 | 1.5 | expressed protein (RefSeq) | compare |
| b3206 | npr | +1.0 | 5.4 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1824 | yobF | +1.0 | 4.2 | hypothetical protein (NCBI) | compare |
| b1072 | flgA | +1.0 | 3.4 | flagellar basal body P-ring biosynthesis protein A (NCBI) | compare |
| b1628 | rsxB | +0.9 | 4.6 | electron transport complex protein RnfB (NCBI) | compare |
| b1191 | b1191 | +0.9 | 6.4 | orf, hypothetical protein (VIMSS) | compare |
| b1037 | csgG | +0.9 | 7.8 | outer membrane lipoprotein (NCBI) | compare |
| b4402 | yjjY | +0.9 | 1.6 | hypothetical protein (NCBI) | compare |
| b1630 | rsxD | +0.9 | 4.4 | electron transport complex protein RnfD (NCBI) | compare |
| b3644 | yicC | +0.9 | 4.6 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | +0.9 | 1.8 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2829 | ptsP | +0.9 | 7.1 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b1236 | galU | +0.9 | 5.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0605 | ahpC | +0.9 | 3.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2642 | yfjW | +0.9 | 1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1083 | flgL | +0.8 | 4.1 | flagellar hook-associated protein L (NCBI) | compare |
| b4110 | yjcZ | +0.8 | 5.9 | orf, hypothetical protein (VIMSS) | compare |
| b1923 | fliC | +0.8 | 6.4 | flagellin (NCBI) | compare |
| b0661 | miaB | +0.8 | 6.0 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b1725 | yniA | +0.8 | 2.4 | predicted phosphotransferase/kinase (NCBI) | compare |
| b1418 | cybB | +0.8 | 2.0 | cytochrome b(561) (VIMSS) | compare |
| b1556 | b1556 | +0.8 | 3.0 | orf, hypothetical protein (VIMSS) | compare |
| b1709 | btuD | +0.8 | 1.1 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1341 | b1341 | +0.8 | 5.6 | orf, hypothetical protein (VIMSS) | compare |
| b4217 | ytfK | +0.8 | 4.3 | orf, hypothetical protein (VIMSS) | compare |
| b1039 | csgE | +0.8 | 4.7 | predicted transport protein (NCBI) | compare |
| b1632 | rsxE | +0.8 | 5.7 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1613 | manA | +0.8 | 3.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2012 | yeeD | +0.8 | 3.0 | hypothetical protein (NCBI) | compare |
| b4094 | phnN | +0.8 | 2.2 | ribose 1,5-bisphosphokinase (NCBI) | compare |
| b1070 | flgN | +0.8 | 1.5 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1924 | fliD | +0.8 | 3.9 | flagellar capping protein (NCBI) | compare |
| b2535 | csiE | +0.7 | 6.4 | orf, hypothetical protein (VIMSS) | compare |
| b1332 | ynaJ | +0.7 | 0.8 | predicted inner membrane protein (NCBI) | compare |
| b2127 | mlrA | +0.7 | 4.8 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1629 | rsxC | +0.7 | 4.3 | electron transport complex protein RnfC (NCBI) | compare |
| b3107 | yhaL | +0.7 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2262 | menB | +0.7 | 1.5 | naphthoate synthase (NCBI) | compare |
| b4071 | nrfB | +0.7 | 1.4 | formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) | compare |
| b1085 | b1085 | +0.7 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b2317 | dedA | +0.7 | 2.2 | conserved inner membrane protein (NCBI) | compare |
| b0059 | hepA | +0.7 | 6.4 | ATP-dependent helicase HepA (NCBI) | compare |
| b1450 | b1450 | +0.7 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b4373 | rimI | +0.7 | 2.2 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b0850 | ybjC | +0.7 | 2.6 | predicted inner membrane protein (NCBI) | compare |
| b2229 | b2229 | +0.7 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1954 | dsrA | +0.7 | 1.0 | regulatory antisense RNA (NCBI) | compare |
| b1890 | motA | +0.7 | 3.3 | flagellar motor protein MotA (NCBI) | compare |
| b3755 | yieP | +0.7 | 5.2 | predicted transcriptional regulator (NCBI) | compare |
| b1082 | flgK | +0.7 | 4.7 | flagellar hook-associated protein K (NCBI) | compare |
| b2742 | nlpD | +0.7 | 2.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1247 | oppF | +0.7 | 2.9 | oligopeptide transporter subunit (NCBI) | compare |
| b3494 | yhiO | +0.7 | 3.6 | universal stress protein UspB (NCBI) | compare |
| b1818 | manY | +0.7 | 2.5 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2067 | yegE | +0.7 | 5.0 | predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) | compare |
| b1244 | oppB | +0.7 | 4.6 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b2911 | ssrS | +0.6 | 1.5 | 6S regulatory RNA (NCBI) | compare |
| b1040 | csgD | +0.6 | 1.9 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b0406 | tgt | +0.6 | 4.2 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b4109 | yjdA | +0.6 | 5.5 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b1946 | fliN | +0.6 | 3.1 | flagellar motor switch protein (NCBI) | compare |
| b1889 | motB | +0.6 | 3.9 | flagellar motor protein MotB (NCBI) | compare |
| b0881 | clpS | +0.6 | 1.7 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1344 | ydaO | +0.6 | 1.9 | predicted C32 tRNA thiolase (NCBI) | compare |
| b1279 | yciS | +0.6 | 0.9 | conserved inner membrane protein (NCBI) | compare |
| b1685 | ydiH | +0.6 | 1.2 | predicted protein (RefSeq) | compare |
| b1171 | b1171 | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1243 | oppA | +0.6 | 3.7 | oligopeptide transporter subunit (NCBI) | compare |
| b1842 | holE | +0.6 | 1.7 | DNA polymerase III, theta subunit (NCBI) | compare |
| b2007 | yeeX | +0.6 | 2.3 | conserved protein (RefSeq) | compare |
| b3963 | fabR | +0.6 | 4.7 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b4171 | miaA | +0.6 | 2.3 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1939 | fliG | +0.6 | 3.3 | flagellar motor switch protein G (NCBI) | compare |
| b3181 | greA | +0.6 | 2.7 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2218 | rcsC | +0.6 | 4.3 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) | compare |
| b1922 | fliA | +0.6 | 3.2 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b1865 | nudB | +0.6 | 1.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2954 | yggV | +0.6 | 1.5 | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | compare |
| b1380 | ldhA | +0.6 | 1.7 | D-lactate dehydrogenase (NCBI) | compare |
| b3119 | tdcR | +0.6 | 1.4 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b1591 | b1591 | +0.6 | 1.6 | putative oxidoreductase component (VIMSS) | compare |
| b2446 | yffO | +0.5 | 1.8 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0627 | tatE | +0.5 | 1.5 | twin arginine translocase protein E (NCBI) | compare |
| b4644 | ypjI | +0.5 | 2.8 | no description | compare |
| b4511 | ybdZ | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b1335 | ogt | +0.5 | 2.0 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b3545 | proK | +0.5 | 1.5 | tRNA-Pro (NCBI) | compare |
| b1242 | ychE | +0.5 | 2.5 | predicted inner membrane protein (NCBI) | compare |
| b0778 | bioD | +0.5 | 1.8 | dethiobiotin synthetase (NCBI) | compare |
| b2774 | ygcW | +0.5 | 2.4 | putative oxidoreductase (VIMSS) | compare |
| b0550 | rusA | +0.5 | 1.6 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b3643 | rph | +0.5 | 1.4 | ribonuclease PH (NCBI) | compare |
| b3863 | polA | +0.5 | 0.8 | DNA polymerase I (NCBI) | compare |
| b2004 | yeeU | +0.5 | 1.5 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b1079 | flgH | +0.5 | 2.2 | flagellar L-ring protein precursor H (NCBI) | compare |
| b3973 | birA | +0.5 | 1.7 | biotin--protein ligase (NCBI) | compare |
| b1848 | yebG | +0.5 | 1.0 | conserved protein regulated by LexA (NCBI) | compare |
| b1253 | yciA | +0.5 | 1.2 | predicted hydrolase (NCBI) | compare |
| b3933 | ftsN | +0.5 | 3.8 | essential cell division protein (NCBI) | compare |
| b2175 | spr | +0.5 | 2.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1569 | dicC | +0.5 | 2.2 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b1941 | fliI | +0.5 | 3.6 | flagellum-specific ATP synthase (NCBI) | compare |
| b3404 | envZ | +0.5 | 3.4 | osmolarity sensor protein (NCBI) | compare |
| b1073 | flgB | +0.5 | 3.0 | flagellar basal-body rod protein B (NCBI) | compare |
| b1074 | flgC | +0.5 | 1.6 | flagellar basal-body rod protein C (NCBI) | compare |
| b1819 | manZ | +0.5 | 2.5 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b1329 | b1329 | +0.5 | 3.0 | putative transport periplasmic protein (VIMSS) | compare |
| b1013 | ycdC | +0.5 | 1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3398 | yrfF | +0.5 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b1945 | fliM | +0.5 | 3.5 | flagellar motor switch protein M (NCBI) | compare |
| b4370 | leuQ | +0.5 | 1.3 | tRNA-Leu (NCBI) | compare |
| b2114 | metG | +0.5 | 1.1 | methionyl-tRNA synthetase (NCBI) | compare |
| b0643 | ybeL | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b2910 | zapA | +0.5 | 2.3 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1627 | rsxA | +0.5 | 2.2 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b4594 | ymgJ | +0.5 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1600 | mdtJ | +0.5 | 1.0 | multidrug efflux system transporter (NCBI) | compare |
| b1949 | fliQ | +0.5 | 1.2 | flagellar biosynthesis protein Q (NCBI) | compare |
| b0623 | cspE | +0.5 | 1.3 | cold shock protein E (NCBI) | compare |
| b1127 | pepT | +0.5 | 3.4 | peptidase T (NCBI) | compare |
| b2204 | napH | +0.4 | 2.0 | quinol dehydrogenase membrane component (NCBI) | compare |
| b4544 | yfbW | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b3498 | prlC | +0.4 | 3.8 | oligopeptidase A (NCBI) | compare |
| b2214 | yojL | +0.4 | 2.7 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b3102 | yqjG | +0.4 | 2.5 | predicted S-transferase (NCBI) | compare |
| b2531 | iscR | +0.4 | 1.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1916 | sdiA | +0.4 | 2.9 | DNA-binding transcriptional activator (NCBI) | compare |
| b1948 | fliP | +0.4 | 2.0 | flagellar biosynthesis protein P (NCBI) | compare |
| b0405 | queA | +0.4 | 2.4 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b1359 | ydaU | +0.4 | 2.0 | Rac prophage; conserved protein (NCBI) | compare |
| b1041 | csgB | +0.4 | 2.0 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b1943 | fliK | +0.4 | 2.7 | flagellar hook-length control protein (NCBI) | compare |
| b3228 | sspB | +0.4 | 2.3 | ClpXP protease specificity-enhancing factor (NCBI) | compare |
| b4461 | yfjD | +0.4 | 2.9 | predicted inner membrane protein (RefSeq) | compare |
| b0975 | hyaD | +0.4 | 2.0 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b0160 | dgt | +0.4 | 4.0 | deoxyguanosinetriphosphate triphosphohydrolase (NCBI) | compare |
| b0920 | ycbC | +0.4 | 2.0 | conserved inner membrane protein (NCBI) | compare |
| b1742 | b1742 | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0852 | rimK | +0.4 | 2.0 | ribosomal protein S6 modification protein (NCBI) | compare |
| b1763 | topB | +0.4 | 1.9 | DNA topoisomerase III (NCBI) | compare |
| b1514 | lsrC | +0.4 | 1.4 | AI2 transporter (NCBI) | compare |
| b2644 | yfjY | +0.4 | 1.1 | CP4-57 prophage; predicted DNA repair protein (NCBI) | compare |
| b2618 | b2618 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2051 | wcaH | +0.4 | 1.1 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2953 | yggU | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3133 | agaV | +0.4 | 0.9 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b2784 | relA | +0.4 | 2.9 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0225 | yafQ | +0.4 | 2.1 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1944 | fliL | +0.4 | 2.3 | flagellar basal body-associated protein FliL (NCBI) | compare |
| b1557 | cspB | +0.4 | 1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b0979 | appB | +0.4 | 2.5 | cytochrome bd-II oxidase, subunit II (NCBI) | compare |
| b3280 | yrdB | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b4543 | ypaA | +0.4 | 1.6 | predicted protein (NCBI) | compare |
| b2646 | ypjF | +0.4 | 1.3 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1931 | yedK | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b0381 | ddlA | +0.4 | 2.7 | D-alanylalanine synthetase (NCBI) | compare |
| b3432 | glgB | +0.4 | 3.5 | glycogen branching enzyme (NCBI) | compare |
| b2419 | yfeK | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b1035 | ycdY | +0.4 | 2.9 | hypothetical protein (NCBI) | compare |
| b1642 | slyA | +0.4 | 0.9 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1621 | malX | +0.4 | 2.5 | fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component (NCBI) | compare |
| b0357 | yaiN | +0.4 | 1.2 | putative alpha helix chain (VIMSS) | compare |
| b1428 | ydcK | +0.4 | 2.4 | predicted enzyme (NCBI) | compare |
| b3156 | yhbS | +0.4 | 2.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1358 | ydaT | +0.4 | 0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b2080 | b2080 | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1110 | ycfJ | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1294 | sapA | +0.4 | 2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2216 | rcsD | +0.4 | 3.0 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | compare |
| b1593 | b1593 | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1879 | flhA | +0.4 | 2.3 | flagellar biosynthesis protein A (NCBI) | compare |
| b3995 | rsd | +0.4 | 2.3 | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | compare |
| b4409 | blr | +0.4 | 2.5 | beta-lactam resistance membrane protein (NCBI) | compare |
| b1295 | ymjA | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b2377 | yfdY | +0.4 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b1156 | tfaE | +0.4 | 1.9 | e14 prophage; predicted tail fiber assembly protein (NCBI) | compare |
| b3190 | yrbA | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2300 | yfcE | +0.4 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1521 | uxaB | +0.4 | 2.2 | tagaturonate reductase (NCBI) | compare |
| b1150 | ymfR | +0.4 | 0.5 | e14 prophage; predicted protein (NCBI) | compare |
| b4055 | aphA | +0.4 | 2.6 | acid phosphatase/phosphotransferase, class B, non-specific (NCBI) | compare |