| | gene | name | fitness | t score | description | |
|---|
| b1192 | ldcA | -8.4 | -5.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b4208 | cycA | -6.9 | -16.8 | D-alanine/D-serine/glycine transporter (NCBI) | conserved |
| b0438 | clpX | -6.5 | -7.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0741 | pal | -6.0 | -5.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0737 | tolQ | -6.0 | -4.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0740 | tolB | -5.9 | -5.7 | translocation protein TolB precursor (NCBI) | compare |
| b3839 | tatC | -5.8 | -8.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4388 | serB | -5.8 | -12.3 | 3-phosphoserine phosphatase (NCBI) | compare |
| b3021 | ygiT | -5.8 | -4.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0739 | tolA | -5.6 | -3.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0907 | serC | -5.2 | -8.7 | phosphoserine aminotransferase (NCBI) | compare |
| b0738 | tolR | -5.2 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2912 | ygfA | -5.2 | -6.2 | putative ligase (VIMSS) | compare |
| b0920 | ycbC | -5.1 | -5.4 | conserved inner membrane protein (NCBI) | compare |
| b0912 | ihfB | -5.1 | -5.9 | integration host factor subunit beta (NCBI) | compare |
| b3792 | wzxE | -4.9 | -8.8 | O-antigen translocase (NCBI) | compare |
| b0683 | fur | -4.8 | -4.4 | ferric uptake regulator (NCBI) | compare |
| b3390 | aroK | -4.4 | -4.8 | shikimate kinase I (NCBI) | compare |
| b2830 | nudH | -4.3 | -3.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0437 | clpP | -4.1 | -11.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3162 | deaD | -3.9 | -8.4 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2913 | serA | -3.9 | -12.0 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b0688 | pgm | -3.8 | -8.4 | phosphoglucomutase (NCBI) | compare |
| b0439 | lon | -3.8 | -10.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2935 | tktA | -3.7 | -2.5 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2576 | srmB | -3.7 | -7.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b0957 | ompA | -3.6 | -4.9 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2567 | rnc | -3.6 | -2.5 | ribonuclease III (NCBI) | compare |
| b0726 | sucA | -3.5 | -7.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3619 | rfaD | -3.5 | -9.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4042 | dgkA | -3.4 | -3.3 | diacylglycerol kinase (NCBI) | compare |
| b2518 | ndk | -3.3 | -5.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b0678 | nagB | -3.3 | -7.5 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b3183 | obgE | -3.3 | -3.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4202 | rpsR | -3.2 | -3.1 | 30S ribosomal protein S18 (NCBI) | compare |
| b2479 | gcvR | -3.2 | -9.1 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3838 | tatB | -3.2 | -6.7 | sec-independent translocase (NCBI) | compare |
| b0049 | apaH | -3.2 | -6.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b1712 | ihfA | -3.2 | -3.1 | integration host factor subunit alpha (NCBI) | compare |
| b3916 | pfkA | -3.2 | -5.3 | 6-phosphofructokinase (NCBI) | compare |
| b0401 | brnQ | -3.2 | -12.0 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b3621 | rfaC | -3.1 | -11.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4375 | prfC | -3.1 | -8.6 | peptide chain release factor 3 (NCBI) | compare |
| b0222 | lpcA | -3.1 | -4.6 | phosphoheptose isomerase (NCBI) | compare |
| b3229 | sspA | -3.0 | -6.4 | stringent starvation protein A (NCBI) | compare |
| b4685 | yrbN | -3.0 | -6.0 | expressed protein (RefSeq) | compare |
| b3052 | rfaE | -2.9 | -8.9 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0632 | dacA | -2.9 | -10.9 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2846 | yqeH | -2.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0232 | yafN | -2.8 | -1.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3613 | yibP | -2.8 | -8.2 | putative membrane protein (VIMSS) | compare |
| b3169 | nusA | -2.8 | -4.9 | transcription elongation factor NusA (NCBI) | compare |
| b3082 | ygjM | -2.7 | -3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2894 | xerD | -2.7 | -1.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0890 | ftsK | -2.7 | -8.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1830 | prc | -2.6 | -9.3 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3290 | trkA | -2.6 | -3.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1677 | lpp | -2.6 | -4.0 | murein lipoprotein (NCBI) | compare |
| b2350 | yfdG | -2.5 | -4.4 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b0114 | aceE | -2.5 | -1.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0724 | sdhB | -2.4 | -7.6 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1236 | galU | -2.4 | -9.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0677 | nagA | -2.4 | -8.2 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0200 | gmhB | -2.3 | -3.4 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -2.3 | -2.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2820 | recB | -2.2 | -2.2 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1290 | sapF | -2.2 | -3.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0080 | fruR | -2.2 | -8.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4239 | treC | -2.2 | -3.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b2937 | speB | -2.2 | -8.6 | agmatinase (NCBI) | compare |
| b1551 | b1551 | -2.2 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2569 | lepA | -2.1 | -5.3 | GTP-binding protein LepA (NCBI) | compare |
| b2620 | smpB | -2.1 | -2.3 | SsrA-binding protein (NCBI) | compare |
| b4647 | mokA | -2.0 | -1.4 | no description | compare |
| b3620 | rfaF | -2.0 | -7.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0149 | mrcB | -2.0 | -14.4 | penicillin-binding protein 1b (NCBI) | compare |
| b0730 | mngR | -2.0 | -3.0 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3204 | ptsN | -1.9 | -6.3 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0722 | sdhD | -1.9 | -7.1 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1058 | yceO | -1.9 | -1.0 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -1.9 | -2.8 | export protein SecB (NCBI) | compare |
| b2699 | recA | -1.8 | -2.1 | recombinase A (NCBI) | compare |
| b4177 | purA | -1.8 | -1.8 | adenylosuccinate synthetase (NCBI) | compare |
| b1185 | dsbB | -1.8 | -4.7 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0721 | sdhC | -1.8 | -9.1 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1545 | pinQ | -1.8 | -0.6 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1293 | sapB | -1.7 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3806 | cyaA | -1.7 | -7.4 | adenylate cyclase (NCBI) | compare |
| b1676 | pykF | -1.7 | -6.7 | pyruvate kinase (NCBI) | compare |
| b3844 | fre | -1.7 | -5.8 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2290 | yfbQ | -1.7 | -12.1 | aspartate aminotransferase (NCBI) | compare |
| b0723 | sdhA | -1.7 | -10.6 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1291 | sapD | -1.7 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3163 | nlpI | -1.7 | -6.0 | hypothetical protein (NCBI) | compare |
| b2853 | ygeI | -1.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | -1.7 | -5.9 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2144 | sanA | -1.7 | -10.8 | hypothetical protein (NCBI) | compare |
| b3600 | mtlD | -1.6 | -6.3 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b0889 | lrp | -1.6 | -2.9 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b3405 | ompR | -1.6 | -6.1 | osmolarity response regulator (NCBI) | compare |
| b3979 | thrT | -1.6 | -0.9 | tRNA-Thr (NCBI) | compare |
| b3386 | rpe | -1.6 | -1.1 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b1088 | yceD | -1.6 | -4.9 | hypothetical protein (NCBI) | compare |
| b1351 | racC | -1.5 | -1.0 | Rac prophage; predicted protein (NCBI) | compare |
| b1165 | ymgA | -1.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b2329 | aroC | -1.5 | -6.5 | chorismate synthase (NCBI) | compare |
| b3741 | gidA | -1.5 | -6.6 | glucose-inhibited division protein A (NCBI) | compare |
| b2330 | yfcB | -1.5 | -2.7 | putative adenine-specific methylase (VIMSS) | compare |
| b3636 | rpmG | -1.5 | -3.4 | 50S ribosomal protein L33 (NCBI) | compare |
| b3863 | polA | -1.5 | -1.6 | DNA polymerase I (NCBI) | compare |
| b2939 | yqgB | -1.4 | -2.4 | predicted protein (RefSeq) | compare |
| b2784 | relA | -1.4 | -8.7 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1105 | ycfM | -1.4 | -7.2 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1292 | sapC | -1.4 | -2.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0430 | cyoC | -1.4 | -7.1 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b0431 | cyoB | -1.4 | -10.0 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b2528 | iscA | -1.4 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1859 | znuB | -1.4 | -7.1 | high-affinity zinc transporter membrane component (NCBI) | compare |
| b0014 | dnaK | -1.4 | -3.2 | molecular chaperone DnaK (NCBI) | compare |
| b3493 | pitA | -1.4 | -7.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b1858 | znuC | -1.4 | -5.9 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b0088 | murD | -1.4 | -1.0 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b4172 | hfq | -1.4 | -0.9 | RNA-binding protein Hfq (NCBI) | compare |
| b1048 | mdoG | -1.4 | -6.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3743 | asnC | -1.4 | -7.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2276 | nuoN | -1.3 | -5.4 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0051 | ksgA | -1.3 | -4.8 | dimethyladenosine transferase (NCBI) | compare |
| b2822 | recC | -1.3 | -5.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4234 | yjgA | -1.3 | -3.5 | hypothetical protein (NCBI) | compare |
| b0053 | surA | -1.3 | -6.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2340 | sixA | -1.3 | -4.8 | phosphohistidine phosphatase (NCBI) | compare |
| b0428 | cyoE | -1.3 | -6.4 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3728 | pstS | -1.3 | -4.3 | phosphate transporter subunit (NCBI) | compare |
| b3791 | rffA | -1.3 | -6.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1049 | mdoH | -1.3 | -8.6 | glucosyltransferase MdoH (NCBI) | compare |
| b1857 | yebL | -1.3 | -6.8 | putative adhesin (VIMSS) | compare |
| b3650 | spoT | -1.3 | -5.5 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b3630 | rfaP | -1.2 | -9.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0432 | cyoA | -1.2 | -8.9 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b4480 | hdfR | -1.2 | -5.7 | transcriptional regulator HdfR (NCBI) | compare |
| b3849 | trkH | -1.2 | -7.8 | potassium transporter (NCBI) | compare |
| b0949 | uup | -1.2 | -7.3 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4503 | yafF | -1.2 | -1.3 | no description | compare |
| b3764 | yifE | -1.2 | -4.8 | hypothetical protein (NCBI) | compare |
| b4155 | yjeA | -1.2 | -1.3 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b4414 | tff | -1.2 | -1.5 | unknown RNA (NCBI) | compare |
| b3725 | pstB | -1.2 | -1.1 | phosphate transporter subunit (NCBI) | compare |
| b0092 | ddlB | -1.2 | -5.5 | D-alanylalanine synthetase (NCBI) | compare |
| b3631 | rfaG | -1.1 | -9.6 | glucosyltransferase I (NCBI) | compare |
| b0908 | aroA | -1.1 | -7.7 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2897 | ygfY | -1.1 | -2.5 | hypothetical protein (NCBI) | compare |
| b1161 | ycgX | -1.1 | -1.6 | hypothetical protein (NCBI) | compare |
| b1865 | nudB | -1.1 | -1.5 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2289 | lrhA | -1.1 | -6.3 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b2281 | nuoI | -1.1 | -2.8 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3790 | rffC | -1.1 | -4.9 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2285 | nuoE | -1.1 | -2.1 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3842 | rfaH | -1.1 | -4.6 | transcriptional activator RfaH (NCBI) | compare |
| b2277 | nuoM | -1.1 | -4.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3463 | ftsE | -1.1 | -0.7 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1860 | ruvB | -1.1 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b1286 | rnb | -1.1 | -2.0 | exoribonuclease II (NCBI) | compare |
| b2278 | nuoL | -1.0 | -6.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2283 | nuoG | -1.0 | -5.4 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b0623 | cspE | -1.0 | -2.2 | cold shock protein E (NCBI) | compare |
| b3198 | kdsC | -1.0 | -3.3 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3706 | trmE | -1.0 | -3.8 | tRNA modification GTPase (NCBI) | compare |
| b1658 | purR | -1.0 | -4.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b0113 | pdhR | -1.0 | -3.9 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b2318 | truA | -1.0 | -2.9 | tRNA pseudouridine synthase A (NCBI) | compare |
| b4416 | rybA | -1.0 | -1.8 | unknown RNA (NCBI) | compare |
| b1855 | lpxM | -1.0 | -4.8 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2947 | gshB | -1.0 | -3.4 | glutathione synthetase (NCBI) | compare |
| b2188 | yejM | -1.0 | -6.2 | predicted hydrolase, inner membrane (NCBI) | compare |
| b1709 | btuD | -1.0 | -0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2286 | nuoC | -1.0 | -4.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1347 | ydaC | -1.0 | -0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b3414 | gntY | -1.0 | -4.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b0028 | fkpB | -1.0 | -1.9 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b3860 | dsbA | -1.0 | -6.1 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3398 | yrfF | -0.9 | -3.3 | predicted inner membrane protein (NCBI) | compare |
| b1084 | rne | -0.9 | -4.4 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3816 | corA | -0.9 | -6.6 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b2168 | fruK | -0.9 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b1497 | b1497 | -0.9 | -0.6 | putative enzyme (VIMSS) | compare |
| b2282 | nuoH | -0.9 | -2.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2938 | speA | -0.9 | -6.4 | arginine decarboxylase (NCBI) | compare |
| b1130 | phoP | -0.9 | -2.1 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0429 | cyoD | -0.9 | -3.9 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b0004 | thrC | -0.9 | -6.7 | threonine synthase (NCBI) | compare |
| b3026 | qseC | -0.9 | -3.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1861 | ruvA | -0.9 | -1.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3726 | pstA | -0.9 | -4.8 | phosphate transporter subunit (NCBI) | compare |
| b1536 | ydeI | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| b0720 | gltA | -0.9 | -5.4 | citrate synthase (NCBI) | compare |
| b2313 | cvpA | -0.9 | -3.4 | membrane protein required for colicin V production (NCBI) | compare |
| b0427 | yajR | -0.9 | -6.3 | putative transport protein (VIMSS) | compare |
| b3933 | ftsN | -0.9 | -4.3 | essential cell division protein (NCBI) | compare |
| b1285 | gmr | -0.9 | -4.2 | modulator of Rnase II stability (NCBI) | compare |
| b4313 | fimE | -0.8 | -5.5 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |