| | gene | name | fitness | t score | description | |
|---|
| b1493 | gadB | +0.9 | 1.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1279 | yciS | +0.9 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b1725 | yniA | +0.8 | 2.6 | predicted phosphotransferase/kinase (NCBI) | compare |
| b3027 | ygiZ | +0.8 | 0.8 | conserved inner membrane protein (NCBI) | compare |
| b1685 | ydiH | +0.7 | 2.0 | predicted protein (RefSeq) | compare |
| b1231 | tyrT | +0.7 | 1.4 | tRNA-Tyr (NCBI) | compare |
| b1183 | umuD | +0.7 | 1.0 | DNA polymerase V, subunit D (NCBI) | compare |
| b4676 | yoaK | +0.7 | 0.9 | expressed protein (RefSeq) | compare |
| b3504 | yhiS | +0.7 | 0.6 | hypothetical protein (RefSeq) | compare |
| b1726 | yniB | +0.6 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b4647 | mokA | +0.6 | 0.6 | no description | compare |
| b1358 | ydaT | +0.6 | 1.0 | Rac prophage; predicted protein (NCBI) | compare |
| b1550 | b1550 | +0.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1667 | ydhR | +0.6 | 1.3 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | +0.6 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1567 | intK | +0.6 | 1.5 | Qin prophage; predicted protein (RefSeq) | compare |
| b1946 | fliN | +0.6 | 2.3 | flagellar motor switch protein (NCBI) | compare |
| b1823 | cspC | +0.6 | 2.1 | stress protein, member of the CspA-family (NCBI) | compare |
| b1841 | yobA | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b1758 | b1758 | +0.5 | 1.3 | putative cytochrome oxidase (VIMSS) | compare |
| b0564 | appY | +0.5 | 0.9 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1783 | yeaG | +0.5 | 4.7 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b4441 | glmY | +0.5 | 1.7 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1954 | dsrA | +0.5 | 1.7 | regulatory antisense RNA (NCBI) | compare |
| b4522 | yciX_1 | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1842 | holE | +0.5 | 0.9 | DNA polymerase III, theta subunit (NCBI) | compare |
| b2792 | yqcC | +0.5 | 3.1 | hypothetical protein (NCBI) | compare |
| b2586 | yfiM | +0.5 | 2.2 | predicted protein (RefSeq) | compare |
| b1642 | slyA | +0.5 | 1.3 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1765 | ydjA | +0.5 | 0.8 | predicted oxidoreductase (NCBI) | compare |
| b0937 | ssuE | +0.5 | 1.6 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b3206 | npr | +0.5 | 3.3 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2236 | yfaE | +0.5 | 2.8 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b1824 | yobF | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b1486 | ddpB | +0.5 | 2.1 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1784 | yeaH | +0.5 | 2.6 | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b2258 | b2258 | +0.5 | 1.1 | putative transport/receptor protein (VIMSS) | compare |
| b1188 | ycgB | +0.5 | 3.5 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b4651 | yibW | +0.4 | 0.4 | no description | compare |
| b1992 | cobS | +0.4 | 2.0 | cobalamin synthase (NCBI) | compare |
| b0843 | ybjH | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b1595 | ynfL | +0.4 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1348 | lar | +0.4 | 1.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4571 | wbbL | +0.4 | 1.6 | no description | compare |
| b1773 | ydjI | +0.4 | 1.7 | predicted aldolase (NCBI) | compare |
| b3101 | yqjF | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2817 | b2817 | +0.4 | 3.2 | putative amidase (VIMSS) | compare |
| b1608 | rstA | +0.4 | 1.7 | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | compare |
| b4503 | yafF | +0.4 | 0.7 | no description | compare |
| b4653 | yicT | +0.4 | 1.1 | no description | compare |
| b2829 | ptsP | +0.4 | 3.7 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3623 | rfaK | +0.4 | 1.5 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b0979 | appB | +0.4 | 2.7 | cytochrome bd-II oxidase, subunit II (NCBI) | compare |
| b3382 | yhfY | +0.4 | 2.6 | orf, hypothetical protein (VIMSS) | compare |
| b2510 | b2510 | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1921 | fliZ | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1040 | csgD | +0.4 | 1.1 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1429 | tehA | +0.4 | 0.8 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1600 | mdtJ | +0.4 | 1.3 | multidrug efflux system transporter (NCBI) | compare |
| b3890 | yiiF | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1939 | fliG | +0.4 | 1.6 | flagellar motor switch protein G (NCBI) | compare |
| b2229 | b2229 | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0542 | renD | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2809 | b2809 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1696 | ydiP | +0.3 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1882 | cheY | +0.3 | 0.4 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1159 | mcrA | +0.3 | 0.8 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b0789 | ybhO | +0.3 | 2.2 | cardiolipin synthase 2 (NCBI) | compare |
| b0850 | ybjC | +0.3 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b0624 | crcB | +0.3 | 2.3 | camphor resistance protein CrcB (NCBI) | compare |
| b1531 | marA | +0.3 | 1.1 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1013 | ycdC | +0.3 | 1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1951 | rcsA | +0.3 | 0.8 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b4675 | yoaJ | +0.3 | 1.6 | expressed protein (RefSeq) | compare |
| b0404 | yajB | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1415 | aldA | +0.3 | 2.4 | Lactaldehyde / glycolaldehyde dehydrogenase aldA (EC 1.2.1.22; EC 1.2.1.21) (from data) | compare |
| b1259 | yciG | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2634 | yfjR | +0.3 | 2.2 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3739 | atpI | +0.3 | 1.9 | membrane-bound ATP synthase, dispensable protein, affects expression of atpB (VIMSS) | compare |
| b4594 | ymgJ | +0.3 | 1.4 | hypothetical protein (RefSeq) | compare |
| b4493 | gapC | +0.3 | 1.7 | no description | compare |
| b1723 | pfkB | +0.3 | 2.1 | 6-phosphofructokinase II; suppressor of pfkA (VIMSS) | compare |
| b4413 | sokC | +0.3 | 0.8 | regulatory antisense RNA (NCBI) | compare |
| b2646 | ypjF | +0.3 | 1.4 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b4158 | yjeO | +0.3 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b0643 | ybeL | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b3973 | birA | +0.3 | 0.8 | biotin--protein ligase (NCBI) | compare |
| b2910 | zapA | +0.3 | 1.2 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b2186 | yejK | +0.3 | 2.6 | nucleoid-associated protein NdpA (NCBI) | compare |
| b4660 | yhiL | +0.3 | 0.2 | no description | compare |
| b2445 | yffN | +0.3 | 1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1607 | ydgC | +0.3 | 0.8 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1940 | fliH | +0.3 | 1.8 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b0784 | moaD | +0.3 | 1.3 | molybdopterin synthase, small subunit (NCBI) | compare |
| b2005 | yeeV | +0.3 | 2.0 | CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b0803 | ybiI | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b2327 | yfcA | +0.3 | 2.2 | conserved inner membrane protein (NCBI) | compare |
| b1427 | rimL | +0.3 | 1.1 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b0622 | crcA | +0.3 | 2.1 | palmitoyl transferase for Lipid A (NCBI) | compare |
| b4012 | yjaB | +0.3 | 1.8 | predicted acetyltransferase (NCBI) | compare |
| b0393 | rdgC | +0.3 | 2.1 | recombination associated protein (NCBI) | compare |
| b1067 | yceH | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b4552 | yrhC | +0.3 | 0.5 | no description | compare |
| b2719 | hycG | +0.3 | 2.2 | hydrogenase 3 and formate hydrogenase complex, HycG subunit (NCBI) | compare |
| b4609 | ryfD | +0.3 | 1.2 | Novel sRNA, function unknown (RefSeq) | compare |
| b3134 | agaW | +0.3 | 1.4 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b4408 | csrB | +0.3 | 1.3 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b3243 | aaeR | +0.3 | 1.6 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b4614 | sokA | +0.3 | 0.8 | no description | compare |
| b3280 | yrdB | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b1010 | ycdK | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b2189 | proL | +0.3 | 0.9 | tRNA-Pro (NCBI) | compare |
| b2929 | yggD | +0.3 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1613 | manA | +0.3 | 1.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3119 | tdcR | +0.3 | 1.0 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b1971 | yedY | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b4416 | rybA | +0.3 | 0.7 | unknown RNA (NCBI) | compare |
| b4644 | ypjI | +0.3 | 1.6 | no description | compare |
| b1931 | yedK | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0108 | ppdD | +0.3 | 1.7 | predicted major pilin subunit (NCBI) | compare |
| b1244 | oppB | +0.3 | 2.0 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b1540 | ydfH | +0.3 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2446 | yffO | +0.3 | 0.9 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0147 | yadP | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2642 | yfjW | +0.3 | 0.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1584 | speG | +0.3 | 2.0 | spermidine N1-acetyltransferase (NCBI) | compare |
| b4631 | ykgQ | +0.3 | 0.8 | no description | compare |
| b1754 | b1754 | +0.2 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2637 | yfjT | +0.2 | 1.2 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1482 | osmC | +0.2 | 0.6 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1688 | ydiK | +0.2 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b2038 | rfbC | +0.2 | 1.8 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b2168 | fruK | +0.2 | 0.5 | 1-phosphofructokinase (NCBI) | compare |
| b2794 | yqcD | +0.2 | 1.9 | hypothetical protein (NCBI) | compare |
| b1900 | araG | +0.2 | 1.2 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0783 | moaC | +0.2 | 1.6 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b2447 | yffP | +0.2 | 1.1 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b4630 | ykgP | +0.2 | 0.9 | no description | compare |
| b1648 | b1648 | +0.2 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1862 | yebB | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1266 | yciV | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b3048 | yqiI | +0.2 | 1.8 | hypothetical protein (NCBI) | compare |
| b1220 | ychO | +0.2 | 1.5 | predicted invasin (RefSeq) | compare |
| b2432 | yfeY | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b2536 | hcaT | +0.2 | 2.0 | predicted 3-phenylpropionic transporter (NCBI) | compare |
| b1521 | uxaB | +0.2 | 1.8 | tagaturonate reductase (NCBI) | compare |
| b1605 | ydgI | +0.2 | 1.4 | predicted arginine/ornithine antiporter transporter (NCBI) | compare |
| b2904 | gcvH | +0.2 | 1.0 | glycine cleavage system protein H (NCBI) | compare |
| b3582 | sgbU | +0.2 | 1.3 | probable 3-hexulose-6-phosphate isomerase (VIMSS) | compare |
| b1028 | ymdE | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4482 | yigE | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b4589 | ylcI | +0.2 | 0.8 | hypothetical protein (RefSeq) | compare |
| b2577 | yfiE | +0.2 | 1.5 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b4269 | yjgB | +0.2 | 1.6 | putative oxidoreductase (VIMSS) | compare |
| b1724 | ydiZ | +0.2 | 1.0 | hypothetical protein (NCBI) | compare |
| b1976 | b1976 | +0.2 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1742 | b1742 | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2903 | gcvP | +0.2 | 2.1 | glycine dehydrogenase (NCBI) | compare |
| b1450 | b1450 | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0041 | fixA | +0.2 | 1.7 | probable flavoprotein subunit, carnitine metabolism (VIMSS) | compare |
| b1829 | htpX | +0.2 | 1.0 | heat shock protein HtpX (NCBI) | compare |
| b0675 | nagD | +0.2 | 1.9 | UMP phosphatase (NCBI) | compare |
| b1246 | oppD | +0.2 | 1.4 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b4543 | ypaA | +0.2 | 1.4 | predicted protein (NCBI) | compare |
| b2758 | ygcJ | +0.2 | 1.7 | hypothetical protein (NCBI) | compare |
| b1194 | ycgR | +0.2 | 1.0 | protein involved in flagellar function (NCBI) | compare |
| b1441 | ydcT | +0.2 | 1.4 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b2538 | hcaE | +0.2 | 1.1 | 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI) | compare |
| b4548 | ypjJ | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b3293 | yhdN | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b2040 | rfbD | +0.2 | 1.8 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | compare |
| b1243 | oppA | +0.2 | 1.4 | oligopeptide transporter subunit (NCBI) | compare |
| b2326 | yfcM | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b2319 | usg | +0.2 | 1.2 | hypothetical protein (NCBI) | compare |
| b1916 | sdiA | +0.2 | 1.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b3049 | glgS | +0.2 | 1.5 | glycogen synthesis protein GlgS (NCBI) | compare |
| b1526 | yneJ | +0.2 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2580 | ung | +0.2 | 1.8 | uracil-DNA glycosylase (NCBI) | compare |
| b2458 | eutI | +0.2 | 1.4 | predicted phosphotransacetylase subunit (NCBI) | compare |
| b2246 | b2246 | +0.2 | 0.9 | putative transport protein (VIMSS) | compare |
| b4409 | blr | +0.2 | 1.4 | beta-lactam resistance membrane protein (NCBI) | compare |
| b4076 | nrfG | +0.2 | 1.5 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG (NCBI) | compare |
| b1565 | ydfV | +0.2 | 1.0 | Qin prophage; predicted protein (NCBI) | compare |
| b3512 | GadE | +0.2 | 1.1 | acid-responsive regulator of gadA and gadBC (Katherine Huang) | compare |
| b0567 | ybcH | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b0367 | tauC | +0.2 | 1.0 | taurine transporter subunit (NCBI) | compare |
| b1621 | malX | +0.2 | 1.3 | fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component (NCBI) | compare |
| b2676 | nrdF | +0.2 | 1.5 | ribonucleotide-diphosphate reductase beta subunit (NCBI) | compare |
| b0388 | aroL | +0.2 | 1.1 | shikimate kinase II (NCBI) | compare |
| b2098 | yegT | +0.2 | 1.6 | predicted nucleoside transporter (NCBI) | compare |
| b3927 | glpF | +0.2 | 1.8 | glycerol facilitator (NCBI) | compare |
| b0550 | rusA | +0.2 | 0.9 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b1038 | csgF | +0.2 | 1.1 | predicted transport protein (NCBI) | compare |
| b4314 | fimA | +0.2 | 1.6 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b1281 | pyrF | +0.2 | 1.2 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1920 | fliY | +0.2 | 0.9 | cystine transporter subunit (NCBI) | compare |
| b2252 | ais | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b4330 | yjiH | +0.2 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0806 | ybiM | +0.2 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3658 | selC | +0.2 | 1.1 | tRNA-Sec (NCBI) | compare |