| | gene | name | fitness | t score | description | |
|---|
| b2279 | nuoK | -5.5 | -2.6 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1279 | yciS | -5.0 | -1.2 | conserved inner membrane protein (NCBI) | compare |
| b1103 | ycfF | -4.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1291 | sapD | -4.4 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2168 | fruK | -4.4 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b1261 | trpB | -4.0 | -2.0 | tryptophan synthase subunit beta (NCBI) | compare |
| b1882 | cheY | -3.8 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0142 | folK | -3.7 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0741 | pal | -3.5 | -5.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0739 | tolA | -3.5 | -5.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1361 | ydaW | -3.2 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0049 | apaH | -3.2 | -4.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b0678 | nagB | -3.2 | -4.2 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b0726 | sucA | -2.9 | -5.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0738 | tolR | -2.9 | -4.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3979 | thrT | -2.8 | -0.7 | tRNA-Thr (NCBI) | compare |
| b0247 | ykfG | -2.8 | -1.3 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1260 | trpA | -2.8 | -2.6 | tryptophan synthase subunit alpha (NCBI) | compare |
| b2913 | serA | -2.7 | -5.5 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b4503 | yafF | -2.6 | -0.9 | no description | compare |
| b3781 | trxA | -2.6 | -4.4 | thioredoxin 1 (VIMSS) | compare |
| b2567 | rnc | -2.6 | -1.4 | ribonuclease III (NCBI) | compare |
| b0073 | leuB | -2.5 | -6.1 | 3-isopropylmalate dehydrogenase (VIMSS) | compare |
| b4388 | serB | -2.5 | -5.7 | 3-phosphoserine phosphatase (NCBI) | compare |
| b0243 | proA | -2.5 | -6.4 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b0438 | clpX | -2.5 | -5.9 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2020 | hisD | -2.5 | -6.2 | histidinol dehydrogenase (NCBI) | compare |
| b0200 | gmhB | -2.4 | -2.1 | hypothetical protein (NCBI) | compare |
| b2024 | hisA | -2.4 | -2.0 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b3636 | rpmG | -2.4 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b3281 | aroE | -2.3 | -8.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0145 | dksA | -2.3 | -3.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3771 | ilvD | -2.3 | -8.3 | dihydroxy-acid dehydratase (NCBI) | compare |
| b3770 | ilvE | -2.3 | -8.2 | branched-chain amino acid aminotransferase (NCBI) | compare |
| b0522 | purK | -2.3 | -5.2 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b0564 | appY | -2.3 | -0.7 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b2026 | hisI | -2.2 | -4.8 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) | compare |
| b1259 | yciG | -2.2 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4006 | purH | -2.2 | -7.4 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0232 | yafN | -2.2 | -0.8 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0242 | proB | -2.2 | -4.3 | gamma-glutamyl kinase (NCBI) | compare |
| b3772 | ilvA | -2.2 | -7.6 | threonine dehydratase (NCBI) | compare |
| b3389 | aroB | -2.2 | -6.5 | 3-dehydroquinate synthase (NCBI) | compare |
| b3728 | pstS | -2.2 | -3.3 | phosphate transporter subunit (NCBI) | compare |
| b2025 | hisF | -2.1 | -3.2 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b3774 | ilvC | -2.1 | -7.9 | ketol-acid reductoisomerase (NCBI) | compare |
| b2023 | hisH | -2.1 | -3.3 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b0003 | thrB | -2.0 | -5.4 | homoserine kinase (NCBI) | compare |
| b4529 | ydbJ | -2.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b2021 | hisC | -2.0 | -3.7 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b4676 | yoaK | -2.0 | -0.6 | expressed protein (RefSeq) | compare |
| b2284 | nuoF | -1.9 | -3.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1292 | sapC | -1.9 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2414 | cysK | -1.9 | -6.5 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b0072 | leuC | -1.9 | -6.5 | isopropylmalate isomerase large subunit (NCBI) | compare |
| b1480 | sra | -1.9 | -1.1 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3811 | xerC | -1.9 | -1.3 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1476 | fdnI | -1.9 | -0.9 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0908 | aroA | -1.9 | -5.0 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1784 | yeaH | -1.9 | -5.0 | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b2846 | yqeH | -1.9 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4410 | ecnA | -1.9 | -1.2 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1188 | ycgB | -1.8 | -4.6 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b0907 | serC | -1.8 | -5.7 | phosphoserine aminotransferase (NCBI) | compare |
| b1160 | elbA | -1.8 | -0.8 | hypothetical protein (NCBI) | compare |
| b0002 | thrA | -1.8 | -6.5 | bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) | compare |
| b2022 | hisB | -1.8 | -5.2 | imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) | compare |
| b2838 | lysA | -1.8 | -6.1 | diaminopimelate decarboxylase, PLP-binding (NCBI) | compare |
| b0439 | lon | -1.8 | -3.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1860 | ruvB | -1.8 | -0.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b3960 | argH | -1.7 | -5.9 | argininosuccinate lyase (NCBI) | compare |
| b1837 | yebW | -1.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1192 | ldcA | -1.7 | -3.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b3642 | pyrE | -1.7 | -3.4 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0004 | thrC | -1.7 | -4.5 | threonine synthase (NCBI) | compare |
| b2894 | xerD | -1.7 | -0.9 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4013 | metA | -1.7 | -2.6 | homoserine O-succinyltransferase (NCBI) | compare |
| b2479 | gcvR | -1.7 | -3.6 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1129 | phoQ | -1.7 | -1.1 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2329 | aroC | -1.6 | -3.2 | chorismate synthase (NCBI) | compare |
| b1693 | aroD | -1.6 | -5.0 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2188 | yejM | -1.6 | -6.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b4005 | purD | -1.6 | -5.8 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b2312 | purF | -1.6 | -3.4 | amidophosphoribosyltransferase (NCBI) | compare |
| b0071 | leuD | -1.6 | -4.4 | isopropylmalate isomerase small subunit (NCBI) | compare |
| b0730 | mngR | -1.6 | -2.1 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1951 | rcsA | -1.6 | -1.1 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0523 | purE | -1.6 | -2.9 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b3426 | glpD | -1.6 | -4.1 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2784 | relA | -1.6 | -5.4 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b3870 | glnA | -1.6 | -2.7 | glutamine synthetase (NCBI) | compare |
| b2051 | wcaH | -1.6 | -1.5 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2600 | tyrA | -1.5 | -3.4 | fused chorismate mutase T/prephenate dehydrogenase (NCBI) | compare |
| b1783 | yeaG | -1.5 | -5.1 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b3773 | ilvY | -1.5 | -5.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3941 | metF | -1.5 | -5.2 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| b2278 | nuoL | -1.4 | -4.9 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2557 | purL | -1.4 | -5.2 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b1426 | ydcH | -1.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1506 | yneL | -1.4 | -1.5 | predicted transcriptional regulator (NCBI) | compare |
| b0641 | rlpB | -1.4 | -2.1 | minor lipoprotein (NCBI) | compare |
| b0074 | leuA | -1.4 | -4.6 | 2-isopropylmalate synthase (NCBI) | compare |
| b2019 | hisG | -1.4 | -3.8 | ATP phosphoribosyltransferase (NCBI) | compare |
| b2504 | yfgG | -1.4 | -1.5 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b1058 | yceO | -1.3 | -0.4 | hypothetical protein (NCBI) | compare |
| b1305 | pspB | -1.3 | -1.7 | phage shock protein B (NCBI) | compare |
| b1281 | pyrF | -1.3 | -3.2 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1762 | b1762 | -1.3 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2699 | recA | -1.3 | -1.4 | recombinase A (NCBI) | compare |
| b2340 | sixA | -1.3 | -1.5 | phosphohistidine phosphatase (NCBI) | compare |
| b1231 | tyrT | -1.3 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b0440 | hupB | -1.3 | -2.9 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b0560 | nohB | -1.3 | -1.1 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1084 | rne | -1.3 | -3.3 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4603 | rseX | -1.3 | -0.5 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2287 | nuoB | -1.3 | -2.0 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0890 | ftsK | -1.2 | -4.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2839 | lysR | -1.2 | -2.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0737 | tolQ | -1.2 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1370 | insH-5 | -1.2 | -1.6 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1062 | pyrC | -1.2 | -4.0 | dihydroorotase (NCBI) | compare |
| b1572 | ydfB | -1.2 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1262 | trpC | -1.2 | -4.3 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b3839 | tatC | -1.2 | -3.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0460 | hha | -1.2 | -2.5 | modulator of gene expression, with H-NS (NCBI) | compare |
| b2646 | ypjF | -1.2 | -1.3 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b4239 | treC | -1.2 | -1.9 | trehalose-6-P hydrolase (NCBI) | compare |
| b1408 | b1408 | -1.2 | -1.9 | probable enzyme (VIMSS) | compare |
| b4509 | ylcG | -1.2 | -1.2 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3203 | yhbH | -1.1 | -3.2 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b2929 | yggD | -1.1 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0437 | clpP | -1.1 | -2.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0998 | torD | -1.1 | -0.9 | chaperone protein TorD (NCBI) | compare |
| b1753 | ynjA | -1.1 | -0.9 | hypothetical protein (NCBI) | compare |
| b2288 | nuoA | -1.1 | -1.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0542 | renD | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4647 | mokA | -1.1 | -0.5 | no description | compare |
| b4545 | ypdJ | -1.1 | -1.0 | no description | compare |
| b4435 | isrC | -1.1 | -1.2 | unknown RNA (NCBI) | compare |
| b3290 | trkA | -1.1 | -2.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3204 | ptsN | -1.1 | -2.5 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2428 | yfeU | -1.1 | -2.9 | N-acetylmuramic acid-6-phosphate etherase (NCBI) | compare |
| b2499 | purM | -1.1 | -2.4 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b1545 | pinQ | -1.1 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1383 | ydbL | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2912 | ygfA | -1.1 | -1.5 | putative ligase (VIMSS) | compare |
| b2532 | yfhQ | -1.1 | -1.7 | predicted methyltransferase (NCBI) | compare |
| b2259 | pmrD | -1.1 | -0.7 | polymyxin resistance protein B (VIMSS) | compare |
| b4593 | ymgI | -1.1 | -0.6 | hypothetical protein (RefSeq) | compare |
| b2939 | yqgB | -1.1 | -1.0 | predicted protein (RefSeq) | compare |
| b2286 | nuoC | -1.1 | -2.4 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1836 | yebV | -1.1 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1551 | b1551 | -1.1 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b4177 | purA | -1.1 | -0.7 | adenylosuccinate synthetase (NCBI) | compare |
| b1358 | ydaT | -1.1 | -0.7 | Rac prophage; predicted protein (NCBI) | compare |
| b2444 | yffM | -1.0 | -1.5 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b2763 | cysI | -1.0 | -3.6 | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | compare |
| b1485 | ddpC | -1.0 | -2.0 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1712 | ihfA | -1.0 | -1.3 | integration host factor subunit alpha (NCBI) | compare |
| b4458 | oxyS | -1.0 | -0.8 | global regulatory RNA (NCBI) | compare |
| b1853 | yebK | -1.0 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0806 | ybiM | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1789 | yeaL | -1.0 | -2.0 | conserved inner membrane protein (NCBI) | compare |
| b2104 | thiM | -1.0 | -2.0 | hydroxyethylthiazole kinase (NCBI) | compare |
| b0080 | fruR | -1.0 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3129 | sohA | -1.0 | -1.9 | predicted regulator (NCBI) | compare |
| b3806 | cyaA | -1.0 | -3.2 | adenylate cyclase (NCBI) | compare |
| b0580 | ybdJ | -1.0 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b1595 | ynfL | -1.0 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2044 | wcaL | -1.0 | -1.8 | predicted glycosyl transferase (NCBI) | compare |
| b3236 | mdh | -1.0 | -3.9 | malate dehydrogenase (NCBI) | compare |
| b1235 | rssB | -1.0 | -3.0 | response regulator of RpoS (NCBI) | compare |
| b4685 | yrbN | -1.0 | -1.1 | expressed protein (RefSeq) | compare |
| b2283 | nuoG | -1.0 | -2.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1676 | pykF | -0.9 | -2.4 | pyruvate kinase (NCBI) | compare |
| b1976 | b1976 | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0113 | pdhR | -0.9 | -2.9 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b3935 | priA | -0.9 | -1.6 | primosome assembly protein PriA (NCBI) | compare |
| b1238 | tdk | -0.9 | -3.0 | thymidine kinase (NCBI) | compare |
| b1556 | b1556 | -0.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4214 | cysQ | -0.9 | -4.4 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b0843 | ybjH | -0.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b3939 | metB | -0.9 | -3.9 | cystathionine gamma-synthase (NCBI) | compare |
| b0817 | mntR | -0.9 | -1.8 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b0386 | proC | -0.9 | -2.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2599 | pheA | -0.9 | -2.5 | fused chorismate mutase P/prephenate dehydratase (NCBI) | compare |
| b3261 | fis | -0.9 | -1.5 | DNA-binding protein Fis (NCBI) | compare |
| b1524 | yneH | -0.9 | -0.6 | predicted glutaminase (NCBI) | compare |
| b4679 | yohP | -0.9 | -1.3 | expressed protein (RefSeq) | compare |
| b2289 | lrhA | -0.9 | -3.6 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b0658 | ybeX | -0.9 | -0.6 | predicteed ion transport (NCBI) | compare |
| b1096 | pabC | -0.9 | -2.8 | 4-amino-4-deoxychorismate lyase (NCBI) | compare |
| b4598 | yncL | -0.9 | -1.1 | hypothetical protein (RefSeq) | compare |
| b1176 | minC | -0.9 | -1.6 | septum formation inhibitor (NCBI) | compare |
| b3008 | metC | -0.9 | -4.1 | cystathionine beta-lyase (NCBI) | compare |
| b4451 | ryhB | -0.9 | -0.8 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2807 | ygdD | -0.9 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b0858 | ybjO | -0.9 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b3623 | rfaK | -0.9 | -1.3 | lipopolysaccharide core biosynthesis (NCBI) | compare |