Experiment set57IT033 for Escherichia coli BW25113

Compare to:

Ying_Nucleobase14 rep C; time point 2

Genes with specific phenotypes:

  gene name fitness t score description  
b4383 deoB -8.4 -5.8 phosphopentomutase (NCBI) conserved
b1784 yeaH -3.2 -9.7 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1188 ycgB -2.9 -9.6 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b1783 yeaG -2.7 -12.3 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b2290 yfbQ -2.6 -14.7 aspartate aminotransferase (NCBI) compare
b2964 nupG -2.4 -14.7 transport of nucleosides, permease protein (VIMSS) compare
b3831 udp -2.4 -15.2 uridine phosphorylase (NCBI) conserved
b1285 gmr -2.3 -8.3 modulator of Rnase II stability (NCBI) compare
b2393 nupC -2.0 -10.3 nucleoside (except guanosine) transporter (NCBI) conserved
b2603 yfiR -1.7 -8.7 hypothetical protein (NCBI) compare
b0964 yccT -1.5 -5.4 hypothetical protein (NCBI) compare
b4384 deoD -1.4 -8.6 purine nucleoside phosphorylase (NCBI) conserved
b0863 artI -1.4 -5.9 arginine transporter subunit (NCBI) compare
b3385 gph -1.4 -10.7 phosphoglycolate phosphatase (NCBI) compare
b3908 sodA -1.1 -5.1 superoxide dismutase, manganese (VIMSS) compare
b4190 yjfP +1.0 6.7 predicted hydrolase (NCBI) compare
b4380 yjjI +1.0 6.0 hypothetical protein (NCBI) compare
b0852 rimK +1.3 8.0 ribosomal protein S6 modification protein (NCBI) compare
b1663 mdtK +1.4 8.6 multidrug efflux protein NorM (NCBI) compare
b4260 pepA +1.7 15.7 leucyl aminopeptidase (NCBI) compare
b1190 dadX +2.2 13.9 alanine racemase (NCBI) compare
b2101 yegW +2.9 20.0 predicted DNA-binding transcriptional regulator (NCBI) compare
b3934 cytR +3.0 27.1 DNA-binding transcriptional dual regulator (NCBI) conserved


Specific phenotypes for carbon source Ying_Nucleobase14 across organisms