Experiment set57IT031 for Escherichia coli BW25113

Compare to:

Ying_Nucleobase14 rep A; time point 2

Genes with specific phenotypes:

  gene name fitness t score description  
b4383 deoB -7.6 -14.6 phosphopentomutase (NCBI) conserved
b1783 yeaG -2.9 -14.8 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b2964 nupG -2.9 -15.1 transport of nucleosides, permease protein (VIMSS) compare
b1784 yeaH -2.9 -11.3 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b3831 udp -2.8 -15.8 uridine phosphorylase (NCBI) conserved
b2290 yfbQ -2.7 -12.2 aspartate aminotransferase (NCBI) compare
b1188 ycgB -2.5 -13.8 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
b2393 nupC -2.0 -9.7 nucleoside (except guanosine) transporter (NCBI) conserved
b1285 gmr -2.0 -9.0 modulator of Rnase II stability (NCBI) compare
b2603 yfiR -1.9 -10.5 hypothetical protein (NCBI) compare
b1660 ydhC -1.7 -5.8 predicted transporter (NCBI) conserved
b0863 artI -1.7 -8.5 arginine transporter subunit (NCBI) compare
b3601 mtlR -1.6 -10.4 DNA-binding repressor (NCBI) compare
b4384 deoD -1.5 -10.1 purine nucleoside phosphorylase (NCBI) conserved
b4395 ytjC -1.4 -6.6 phosphoglycerate mutase (NCBI) compare
b1422 ydcI -1.4 -7.8 putative transcriptional regulator LYSR-type (VIMSS) compare
b3385 gph -1.4 -11.3 phosphoglycolate phosphatase (NCBI) compare
b0964 yccT -1.3 -6.2 hypothetical protein (NCBI) compare
b2475 ypfJ -1.3 -6.8 hypothetical protein (NCBI) compare
b2042 galF +1.0 8.0 predicted subunit with GalU (NCBI) compare
b4380 yjjI +1.0 5.5 hypothetical protein (NCBI) compare
b1341 b1341 +1.2 7.4 orf, hypothetical protein (VIMSS) compare
b4381 deoC +1.4 5.2 deoxyribose-phosphate aldolase (NCBI) compare
b1663 mdtK +1.6 8.4 multidrug efflux protein NorM (NCBI) compare
b4260 pepA +1.8 16.0 leucyl aminopeptidase (NCBI) compare
b1190 dadX +2.3 16.7 alanine racemase (NCBI) compare
b3934 cytR +3.1 28.4 DNA-binding transcriptional dual regulator (NCBI) conserved
b2101 yegW +3.1 23.2 predicted DNA-binding transcriptional regulator (NCBI) compare


Specific phenotypes for carbon source Ying_Nucleobase14 across organisms