| | gene | name | fitness | t score | description | |
|---|
| b2830 | nudH | +3.9 | 14.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2688 | gshA | +3.2 | 24.4 | glutamate--cysteine ligase (NCBI) | compare |
| b2101 | yegW | +3.1 | 23.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3934 | cytR | +3.1 | 28.4 | DNA-binding transcriptional dual regulator (NCBI) | conserved |
| b1236 | galU | +3.0 | 23.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2947 | gshB | +2.8 | 18.4 | glutathione synthetase (NCBI) | compare |
| b2903 | gcvP | +2.5 | 23.8 | glycine dehydrogenase (NCBI) | compare |
| b0840 | deoR | +2.3 | 13.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3181 | greA | +2.3 | 17.5 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1190 | dadX | +2.3 | 16.7 | alanine racemase (NCBI) | compare |
| b1095 | fabF | +2.3 | 18.5 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b2904 | gcvH | +2.2 | 9.4 | glycine cleavage system protein H (NCBI) | compare |
| b1824 | yobF | +2.0 | 2.9 | hypothetical protein (NCBI) | compare |
| b4260 | pepA | +1.8 | 16.0 | leucyl aminopeptidase (NCBI) | compare |
| b3706 | trmE | +1.7 | 7.7 | tRNA modification GTPase (NCBI) | compare |
| b3977 | tyrU | +1.7 | 3.9 | tRNA-Tyr (NCBI) | compare |
| b1663 | mdtK | +1.6 | 8.4 | multidrug efflux protein NorM (NCBI) | compare |
| b2829 | ptsP | +1.6 | 12.6 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b0059 | hepA | +1.5 | 14.2 | ATP-dependent helicase HepA (NCBI) | compare |
| b4450 | arcZ | +1.5 | 9.6 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b1823 | cspC | +1.5 | 3.1 | stress protein, member of the CspA-family (NCBI) | compare |
| b3199 | yrbK | +1.4 | 4.7 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | +1.4 | 9.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4381 | deoC | +1.4 | 5.2 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b3741 | gidA | +1.4 | 10.0 | glucose-inhibited division protein A (NCBI) | compare |
| b2808 | gcvA | +1.4 | 7.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3164 | pnp | +1.4 | 7.7 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1273 | yciN | +1.3 | 3.0 | hypothetical protein (NCBI) | compare |
| b1085 | b1085 | +1.3 | 3.4 | orf, hypothetical protein (VIMSS) | compare |
| b0688 | pgm | +1.2 | 6.4 | phosphoglucomutase (NCBI) | compare |
| b3341 | rpsG | +1.2 | 1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b3842 | rfaH | +1.2 | 9.6 | transcriptional activator RfaH (NCBI) | compare |
| b1038 | csgF | +1.2 | 5.9 | predicted transport protein (NCBI) | compare |
| b0852 | rimK | +1.2 | 5.9 | ribosomal protein S6 modification protein (NCBI) | compare |
| b1341 | b1341 | +1.2 | 7.4 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | +1.1 | 7.9 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3405 | ompR | +1.1 | 6.7 | osmolarity response regulator (NCBI) | compare |
| b3630 | rfaP | +1.1 | 9.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3387 | dam | +1.1 | 10.0 | DNA adenine methylase (NCBI) | compare |
| b0437 | clpP | +1.1 | 7.3 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3404 | envZ | +1.1 | 7.5 | osmolarity sensor protein (NCBI) | compare |
| b4373 | rimI | +1.1 | 4.0 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1233 | ychJ | +1.1 | 1.0 | hypothetical protein (NCBI) | compare |
| b3929 | rraA | +1.1 | 9.7 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b3755 | yieP | +1.1 | 8.7 | predicted transcriptional regulator (NCBI) | compare |
| b3644 | yicC | +1.1 | 7.3 | hypothetical protein (NCBI) | compare |
| b1294 | sapA | +1.1 | 5.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2127 | mlrA | +1.1 | 6.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4391 | yjjK | +1.0 | 8.3 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1235 | rssB | +1.0 | 7.4 | response regulator of RpoS (NCBI) | compare |
| b4380 | yjjI | +1.0 | 5.5 | hypothetical protein (NCBI) | compare |
| b2948 | yqgE | +1.0 | 4.6 | orf, hypothetical protein (VIMSS) | compare |
| b0053 | surA | +1.0 | 7.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0556 | rzpD | +1.0 | 1.6 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b2042 | galF | +1.0 | 8.0 | predicted subunit with GalU (NCBI) | compare |
| b3052 | rfaE | +1.0 | 6.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1831 | proQ | +0.9 | 5.7 | putative solute/DNA competence effector (NCBI) | compare |
| b2421 | cysM | +0.9 | 4.9 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b3631 | rfaG | +0.9 | 8.5 | glucosyltransferase I (NCBI) | compare |
| b4256 | yjgM | +0.9 | 7.8 | predicted acetyltransferase (NCBI) | compare |
| b4558 | yifL | +0.9 | 2.9 | predicted lipoprotein (NCBI) | compare |
| b2258 | b2258 | +0.9 | 2.0 | putative transport/receptor protein (VIMSS) | compare |
| b4135 | yjdC | +0.9 | 7.0 | orf, hypothetical protein (VIMSS) | compare |
| b3261 | fis | +0.9 | 3.0 | DNA-binding protein Fis (NCBI) | compare |
| b1222 | narX | +0.9 | 5.8 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b1187 | fadR | +0.9 | 5.8 | fatty acid metabolism regulator (NCBI) | compare |
| b4110 | yjcZ | +0.9 | 6.5 | orf, hypothetical protein (VIMSS) | compare |
| b0949 | uup | +0.8 | 6.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0222 | lpcA | +0.8 | 3.4 | phosphoheptose isomerase (NCBI) | compare |
| b2576 | srmB | +0.8 | 3.9 | ATP-dependent RNA helicase (NCBI) | compare |
| b2175 | spr | +0.8 | 4.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1853 | yebK | +0.8 | 3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4239 | treC | +0.8 | 3.2 | trehalose-6-P hydrolase (NCBI) | compare |
| b1606 | folM | +0.8 | 6.0 | short chain dehydrogenase (NCBI) | compare |
| b0926 | ycbK | +0.8 | 5.8 | hypothetical protein (NCBI) | compare |
| b3769 | ilvM | +0.8 | 2.5 | acetolactate synthase II, small subunit (NCBI) | compare |
| b2067 | yegE | +0.8 | 6.6 | predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) | compare |
| b0178 | hlpA | +0.8 | 4.5 | periplasmic chaperone (NCBI) | compare |
| b1482 | osmC | +0.8 | 1.6 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b2572 | rseA | +0.8 | 2.5 | anti-sigma factor (NCBI) | compare |
| b2749 | ygbE | +0.8 | 5.2 | conserved inner membrane protein (NCBI) | compare |
| b2303 | folX | +0.8 | 6.6 | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase (NCBI) | compare |
| b3621 | rfaC | +0.8 | 5.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1332 | ynaJ | +0.8 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b3351 | kefG | +0.8 | 3.9 | glutathione-regulated potassium-efflux system ancillary protein (NCBI) | compare |
| b1284 | yciT | +0.8 | 5.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2218 | rcsC | +0.8 | 6.6 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) | compare |
| b2642 | yfjW | +0.8 | 1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4190 | yjfP | +0.8 | 5.3 | predicted hydrolase (NCBI) | compare |
| b0955 | ycbZ | +0.8 | 5.7 | predicted peptidase (NCBI) | compare |
| b2517 | yfgB | +0.7 | 5.4 | predicted enzyme (NCBI) | compare |
| b1042 | csgA | +0.7 | 4.7 | cryptic curlin major subunit (NCBI) | compare |
| b2007 | yeeX | +0.7 | 2.6 | conserved protein (RefSeq) | compare |
| b0866 | ybjQ | +0.7 | 1.6 | hypothetical protein (NCBI) | compare |
| b4647 | mokA | +0.7 | 0.9 | no description | compare |
| b1642 | slyA | +0.7 | 2.4 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0381 | ddlA | +0.7 | 5.1 | D-alanylalanine synthetase (NCBI) | compare |
| b4416 | rybA | +0.7 | 1.9 | unknown RNA (NCBI) | compare |
| b0564 | appY | +0.7 | 1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1037 | csgG | +0.7 | 5.9 | outer membrane lipoprotein (NCBI) | compare |
| b3350 | kefB | +0.7 | 6.6 | glutathione-regulated potassium-efflux system protein (NCBI) | compare |
| b2189 | proL | +0.7 | 2.2 | tRNA-Pro (NCBI) | compare |
| b2183 | rsuA | +0.7 | 3.7 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b2512 | yfgL | +0.7 | 4.7 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4520 | ymgF | +0.7 | 2.4 | hypothetical protein (NCBI) | compare |
| b3973 | birA | +0.7 | 2.8 | biotin--protein ligase (NCBI) | compare |
| b3676 | yidH | +0.7 | 4.6 | conserved inner membrane protein (NCBI) | compare |
| b0610 | rnk | +0.7 | 3.5 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b4109 | yjdA | +0.7 | 5.9 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b3206 | npr | +0.7 | 2.6 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1634 | tppB | +0.7 | 4.5 | putative tripeptide transporter permease (NCBI) | compare |
| b1349 | recT | +0.7 | 3.3 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b3752 | rbsK | +0.7 | 5.8 | ribokinase (NCBI) | compare |
| b2324 | b2324 | +0.7 | 4.8 | putative peptidase (VIMSS) | compare |
| b2314 | dedD | +0.6 | 2.6 | putative lipoprotein (VIMSS) | compare |
| b3753 | rbsR | +0.6 | 4.5 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b1329 | b1329 | +0.6 | 4.4 | putative transport periplasmic protein (VIMSS) | compare |
| b1696 | ydiP | +0.6 | 3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0051 | ksgA | +0.6 | 4.2 | dimethyladenosine transferase (NCBI) | compare |
| b2951 | yggS | +0.6 | 4.3 | predicted enzyme (NCBI) | compare |
| b1607 | ydgC | +0.6 | 1.3 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2516 | yfgA | +0.6 | 4.7 | hypothetical protein (NCBI) | compare |
| b1804 | rnd | +0.6 | 3.6 | ribonuclease D (NCBI) | compare |
| b0685 | ybfE | +0.6 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b3238 | yhcN | +0.6 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3784 | rfe | +0.6 | 5.0 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3889 | yiiE | +0.6 | 2.7 | predicted transcriptional regulator (RefSeq) | compare |
| b1758 | b1758 | +0.6 | 1.2 | putative cytochrome oxidase (VIMSS) | compare |
| b4596 | yciZ | +0.6 | 1.9 | hypothetical protein (RefSeq) | compare |
| b4390 | nadR | +0.6 | 4.7 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b0221 | yafH | +0.6 | 5.3 | putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) | compare |
| b3197 | kdsD | +0.6 | 3.9 | D-arabinose 5-phosphate isomerase (NCBI) | compare |
| b4141 | yjeH | +0.6 | 5.2 | predicted transporter (NCBI) | compare |
| b2313 | cvpA | +0.6 | 2.6 | membrane protein required for colicin V production (NCBI) | compare |
| b4375 | prfC | +0.6 | 3.4 | peptide chain release factor 3 (NCBI) | compare |
| b1765 | ydjA | +0.6 | 0.8 | predicted oxidoreductase (NCBI) | compare |
| b0779 | uvrB | +0.6 | 4.7 | excinuclease ABC subunit B (NCBI) | compare |
| b1090 | plsX | +0.6 | 3.4 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b4592 | yccB | +0.6 | 1.0 | hypothetical protein (RefSeq) | compare |
| b1891 | flhC | +0.6 | 3.2 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b2518 | ndk | +0.6 | 2.4 | nucleoside diphosphate kinase (NCBI) | compare |
| b4533 | ynfO | +0.6 | 2.4 | Qin prophage; predicted protein (NCBI) | compare |
| b0385 | yaiC | +0.6 | 3.2 | predicted diguanylate cyclase (NCBI) | compare |
| b0197 | metQ | +0.6 | 4.3 | DL-methionine transporter subunit (NCBI) | compare |
| b2521 | sseA | +0.6 | 4.2 | putative thiosulfate sulfurtransferase (VIMSS) | compare |
| b1217 | chaB | +0.6 | 1.5 | cation transport regulator (NCBI) | compare |
| b4461 | yfjD | +0.5 | 4.2 | predicted inner membrane protein (RefSeq) | compare |
| b2698 | recX | +0.5 | 1.4 | RecA regulator RecX (NCBI) | compare |
| b1514 | lsrC | +0.5 | 2.2 | AI2 transporter (NCBI) | compare |
| b1871 | yecP | +0.5 | 3.1 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b3466 | yhhL | +0.5 | 2.7 | conserved inner membrane protein (NCBI) | compare |
| b4551 | yheV | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b0632 | dacA | +0.5 | 3.8 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0212 | gloB | +0.5 | 1.8 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b1041 | csgB | +0.5 | 2.3 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b0167 | glnD | +0.5 | 1.1 | PII uridylyl-transferase (NCBI) | compare |
| b4058 | uvrA | +0.5 | 4.5 | excinuclease ABC subunit A (NCBI) | compare |
| b1450 | b1450 | +0.5 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b2962 | yggX | +0.5 | 2.8 | hypothetical protein (NCBI) | compare |
| b1513 | lsrA | +0.5 | 3.4 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3150 | yraP | +0.5 | 3.6 | hypothetical protein (NCBI) | compare |
| b1106 | ycfN | +0.5 | 2.7 | thiamin kinase (NCBI) | compare |
| b2352 | yfdI | +0.5 | 0.9 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b3146 | yraL | +0.5 | 3.3 | predicted methyltransferase (NCBI) | compare |
| b1819 | manZ | +0.5 | 2.5 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b3617 | kbl | +0.5 | 3.5 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1108 | ycfP | +0.5 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2114 | metG | +0.5 | 1.1 | methionyl-tRNA synthetase (NCBI) | compare |
| b1493 | gadB | +0.5 | 0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b4409 | blr | +0.5 | 3.2 | beta-lactam resistance membrane protein (NCBI) | compare |
| b0998 | torD | +0.5 | 1.0 | chaperone protein TorD (NCBI) | compare |
| b1952 | dsrB | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b3465 | yhhF | +0.5 | 3.6 | predicted methyltransferase (NCBI) | compare |
| b3766 | ilvL | +0.5 | 2.5 | ilvG operon leader peptide (NCBI) | compare |
| b0935 | ssuD | +0.5 | 1.4 | alkanesulfonate monooxygenase (NCBI) | compare |
| b2946 | yggJ | +0.5 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0710 | ybgI | +0.5 | 2.8 | conserved metal-binding protein (NCBI) | compare |
| b2066 | udk | +0.5 | 3.0 | uridine/cytidine kinase (VIMSS) | compare |
| b3786 | rffE | +0.5 | 3.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b4413 | sokC | +0.5 | 1.0 | regulatory antisense RNA (NCBI) | compare |
| b2538 | hcaE | +0.5 | 1.4 | 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI) | compare |
| b3156 | yhbS | +0.4 | 3.5 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b3632 | rfaQ | +0.4 | 4.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2786 | barA | +0.4 | 4.3 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | compare |
| b1685 | ydiH | +0.4 | 0.9 | predicted protein (RefSeq) | compare |
| b3787 | rffD | +0.4 | 3.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1542 | ydfI | +0.4 | 1.6 | predicted mannonate dehydrogenase (NCBI) | compare |
| b2553 | glnB | +0.4 | 3.2 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b4028 | yjbG | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b4345 | mcrC | +0.4 | 0.9 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b2536 | hcaT | +0.4 | 3.3 | predicted 3-phenylpropionic transporter (NCBI) | compare |
| b1603 | pntA | +0.4 | 2.8 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b3293 | yhdN | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b1667 | ydhR | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b1553 | ydfP | +0.4 | 1.1 | Qin prophage; conserved protein (NCBI) | compare |
| b3740 | gidB | +0.4 | 1.7 | glucose-inhibited division protein B (NCBI) | compare |
| b1040 | csgD | +0.4 | 1.2 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1485 | ddpC | +0.4 | 2.1 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b0461 | ybaJ | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b3388 | damX | +0.4 | 3.6 | hypothetical protein (NCBI) | compare |