| | gene | name | fitness | t score | description | |
|---|
| b1231 | tyrT | -5.2 | -1.5 | tRNA-Tyr (NCBI) | compare |
| b1506 | yneL | -4.6 | -3.2 | predicted transcriptional regulator (NCBI) | compare |
| b1882 | cheY | -4.2 | -1.2 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1480 | sra | -3.8 | -2.2 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2620 | smpB | -3.6 | -2.4 | SsrA-binding protein (NCBI) | compare |
| b1709 | btuD | -3.5 | -1.3 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3500 | gor | -3.5 | -3.7 | glutathione reductase (NCBI) | compare |
| b2567 | rnc | -3.4 | -2.1 | ribonuclease III (NCBI) | compare |
| b3619 | rfaD | -3.2 | -6.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1258 | yciF | -2.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b0222 | lpcA | -2.8 | -3.5 | phosphoheptose isomerase (NCBI) | compare |
| b0564 | appY | -2.7 | -1.0 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3863 | polA | -2.6 | -2.2 | DNA polymerase I (NCBI) | compare |
| b3870 | glnA | -2.6 | -5.6 | glutamine synthetase (NCBI) | compare |
| b2330 | yfcB | -2.5 | -3.0 | putative adenine-specific methylase (VIMSS) | compare |
| b4585 | sroB | -2.5 | -1.7 | Novel sRNA, function unknown (RefSeq) | compare |
| b0200 | gmhB | -2.4 | -2.6 | hypothetical protein (NCBI) | compare |
| b3621 | rfaC | -2.4 | -7.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1730 | ydjO | -2.3 | -1.2 | predicted protein (RefSeq) | compare |
| b0990 | cspG | -2.3 | -1.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1293 | sapB | -2.2 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4520 | ymgF | -2.2 | -2.7 | hypothetical protein (NCBI) | compare |
| b0738 | tolR | -2.1 | -4.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4202 | rpsR | -1.9 | -1.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b2939 | yqgB | -1.9 | -2.0 | predicted protein (RefSeq) | compare |
| b2188 | yejM | -1.9 | -8.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b1551 | b1551 | -1.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1361 | ydaW | -1.8 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b2259 | pmrD | -1.8 | -1.2 | polymyxin resistance protein B (VIMSS) | compare |
| b4416 | rybA | -1.8 | -1.7 | unknown RNA (NCBI) | compare |
| b1984 | asnW | -1.7 | -1.4 | tRNA-Asn (NCBI) | compare |
| b1058 | yceO | -1.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b3021 | ygiT | -1.7 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4146 | yjeK | -1.7 | -3.6 | predicted lysine aminomutase (NCBI) | compare |
| b3290 | trkA | -1.7 | -3.9 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1025 | ycdT | -1.7 | -2.2 | predicted diguanylate cyclase (NCBI) | compare |
| b1192 | ldcA | -1.6 | -3.4 | L,D-carboxypeptidase A (NCBI) | compare |
| b3631 | rfaG | -1.6 | -10.3 | glucosyltransferase I (NCBI) | compare |
| b0438 | clpX | -1.6 | -5.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2859 | ygeO | -1.6 | -3.3 | hypothetical protein (RefSeq) | compare |
| b1545 | pinQ | -1.5 | -0.4 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b0053 | surA | -1.5 | -4.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2853 | ygeI | -1.5 | -0.7 | hypothetical protein (NCBI) | compare |
| b0957 | ompA | -1.5 | -3.5 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2285 | nuoE | -1.4 | -2.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2912 | ygfA | -1.4 | -3.3 | putative ligase (VIMSS) | compare |
| b1182 | hlyE | -1.4 | -0.9 | hemolysin E (VIMSS) | compare |
| b4552 | yrhC | -1.4 | -0.6 | no description | compare |
| b3052 | rfaE | -1.4 | -3.4 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1259 | yciG | -1.4 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0866 | ybjQ | -1.3 | -1.2 | hypothetical protein (NCBI) | compare |
| b0550 | rusA | -1.3 | -2.8 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b2820 | recB | -1.3 | -2.1 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3839 | tatC | -1.3 | -4.6 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1434 | ydcN | -1.3 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1351 | racC | -1.3 | -0.8 | Rac prophage; predicted protein (NCBI) | compare |
| b1165 | ymgA | -1.3 | -0.8 | hypothetical protein (NCBI) | compare |
| b4239 | treC | -1.2 | -3.5 | trehalose-6-P hydrolase (NCBI) | compare |
| b1130 | phoP | -1.2 | -2.2 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3725 | pstB | -1.2 | -0.8 | phosphate transporter subunit (NCBI) | compare |
| b3405 | ompR | -1.2 | -2.7 | osmolarity response regulator (NCBI) | compare |
| b3623 | rfaK | -1.2 | -2.4 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1860 | ruvB | -1.2 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b0953 | rmf | -1.2 | -2.8 | ribosome modulation factor (NCBI) | compare |
| b1607 | ydgC | -1.2 | -1.4 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2163 | yeiL | -1.2 | -4.8 | putative transcriptional regulator (VIMSS) | compare |
| b1382 | ynbE | -1.1 | -1.3 | predicted lipoprotein (NCBI) | compare |
| b2288 | nuoA | -1.1 | -2.5 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2911 | ssrS | -1.1 | -1.2 | 6S regulatory RNA (NCBI) | compare |
| b2375 | yfdX | -1.1 | -4.0 | hypothetical protein (NCBI) | compare |
| b0142 | folK | -1.1 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0623 | cspE | -1.1 | -1.3 | cold shock protein E (NCBI) | compare |
| b0101 | yacG | -1.1 | -1.7 | zinc-binding protein (NCBI) | compare |
| b3169 | nusA | -1.1 | -1.8 | transcription elongation factor NusA (NCBI) | compare |
| b3761 | trpT | -1.1 | -1.3 | tRNA-Trp (NCBI) | compare |
| b0740 | tolB | -1.0 | -2.9 | translocation protein TolB precursor (NCBI) | compare |
| b4201 | priB | -1.0 | -2.0 | primosomal replication protein N (NCBI) | compare |
| b0114 | aceE | -1.0 | -1.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1161 | ycgX | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b0907 | serC | -1.0 | -3.8 | phosphoserine aminotransferase (NCBI) | compare |
| b1863 | ruvC | -1.0 | -1.9 | Holliday junction resolvase (NCBI) | compare |
| b3726 | pstA | -1.0 | -2.8 | phosphate transporter subunit (NCBI) | compare |
| b2281 | nuoI | -1.0 | -1.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b4570 | lomR | -1.0 | -1.7 | no description | compare |
| b1773 | ydjI | -1.0 | -2.4 | predicted aldolase (NCBI) | compare |
| b2652 | ileY | -0.9 | -1.3 | tRNA-Ile (NCBI) | compare |
| b4513 | kdpF | -0.9 | -1.6 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2289 | lrhA | -0.9 | -5.0 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b2475 | ypfJ | -0.9 | -4.3 | hypothetical protein (NCBI) | compare |
| b1677 | lpp | -0.9 | -1.0 | murein lipoprotein (NCBI) | compare |
| b4101 | phnG | -0.9 | -2.2 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b4545 | ypdJ | -0.9 | -2.0 | no description | compare |
| b0890 | ftsK | -0.9 | -3.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1968 | yedV | -0.9 | -3.0 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b1579 | intQ | -0.9 | -3.4 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b1707 | ydiV | -0.9 | -2.8 | hypothetical protein (NCBI) | compare |
| b2209 | eco | -0.9 | -1.7 | ecotin precursor (NCBI) | compare |
| b1253 | yciA | -0.9 | -1.7 | predicted hydrolase (NCBI) | compare |
| b3203 | yhbH | -0.9 | -1.7 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b1536 | ydeI | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b0658 | ybeX | -0.9 | -1.4 | predicteed ion transport (NCBI) | compare |
| b2814 | metZ | -0.9 | -1.2 | tRNA-Met (NCBI) | compare |
| b2274 | yfbO | -0.9 | -2.6 | predicted protein (RefSeq) | compare |
| b2287 | nuoB | -0.8 | -1.8 | NADH dehydrogenase subunit B (NCBI) | compare |
| b4701 | sokX | -0.8 | -0.5 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3806 | cyaA | -0.8 | -3.0 | adenylate cyclase (NCBI) | compare |
| b1332 | ynaJ | -0.8 | -0.5 | predicted inner membrane protein (NCBI) | compare |
| b1530 | marR | -0.8 | -1.8 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1686 | ydiI | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b4594 | ymgJ | -0.8 | -1.3 | hypothetical protein (RefSeq) | compare |
| b2479 | gcvR | -0.8 | -2.0 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b4613 | dinQ | -0.8 | -1.2 | Damage inducible, function unknown (RefSeq) | compare |
| b1129 | phoQ | -0.8 | -1.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b2822 | recC | -0.8 | -3.2 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0136 | yadK | -0.8 | -3.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1690 | ydiM | -0.8 | -2.5 | predicted transporter (NCBI) | compare |
| b2390 | ypeC | -0.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b1533 | ydeD | -0.8 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0523 | purE | -0.8 | -2.5 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b0178 | hlpA | -0.8 | -1.2 | periplasmic chaperone (NCBI) | compare |
| b3624 | rfaZ | -0.8 | -2.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3162 | deaD | -0.8 | -2.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1368 | ynaA | -0.8 | -1.7 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b2476 | purC | -0.8 | -1.8 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b0440 | hupB | -0.8 | -2.6 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b0741 | pal | -0.8 | -2.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2237 | inaA | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b1490 | yddV | -0.8 | -2.6 | predicted diguanylate cyclase (RefSeq) | compare |
| b0002 | thrA | -0.8 | -4.9 | bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) | compare |
| b3941 | metF | -0.7 | -3.3 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| b1507 | hipA | -0.7 | -1.9 | regulator with hipB (NCBI) | compare |
| b1347 | ydaC | -0.7 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1188 | ycgB | -0.7 | -2.9 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b0013 | yaaI | -0.7 | -3.1 | hypothetical protein (NCBI) | compare |
| b1261 | trpB | -0.7 | -1.4 | tryptophan synthase subunit beta (NCBI) | compare |
| b0836 | yliH | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b2083 | yegZ | -0.7 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | -0.7 | -2.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1684 | sufA | -0.7 | -1.4 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b1762 | b1762 | -0.7 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3029 | ygiN | -0.7 | -0.8 | quinol monooxygenase (NCBI) | compare |
| b1291 | sapD | -0.7 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4695 | ykgT | -0.7 | -0.9 | no description | compare |
| b3781 | trxA | -0.7 | -2.0 | thioredoxin 1 (VIMSS) | compare |
| b2024 | hisA | -0.7 | -0.6 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b3164 | pnp | -0.7 | -1.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2021 | hisC | -0.7 | -3.0 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b0073 | leuB | -0.7 | -3.9 | 3-isopropylmalate dehydrogenase (VIMSS) | compare |
| b4497 | yeeL | -0.7 | -0.5 | no description | compare |
| b2499 | purM | -0.7 | -3.6 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b3935 | priA | -0.7 | -1.2 | primosome assembly protein PriA (NCBI) | compare |
| b0216 | aspV | -0.7 | -1.9 | tRNA-Asp (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b2428 | yfeU | -0.7 | -2.4 | N-acetylmuramic acid-6-phosphate etherase (NCBI) | compare |
| b1285 | gmr | -0.7 | -2.5 | modulator of Rnase II stability (NCBI) | compare |
| b2410 | yfeH | -0.7 | -1.9 | predicted inner membrane protein (NCBI) | compare |
| b1839 | yebY | -0.7 | -1.9 | hypothetical protein (NCBI) | compare |
| b1290 | sapF | -0.7 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1753 | ynjA | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b2282 | nuoH | -0.7 | -1.5 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0705 | ybfL | -0.7 | -0.4 | putative receptor protein (VIMSS) | compare |
| b1348 | lar | -0.7 | -1.0 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1667 | ydhR | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b2003 | yeeT | -0.6 | -1.3 | CP4-44 prophage; predicted protein (NCBI) | compare |
| b2603 | yfiR | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b0522 | purK | -0.6 | -3.3 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b4494 | arpB | -0.6 | -1.6 | no description | compare |
| b0386 | proC | -0.6 | -2.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4294 | insA-7 | -0.6 | -0.8 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b3628 | rfaB | -0.6 | -3.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b4414 | tff | -0.6 | -1.4 | unknown RNA (NCBI) | compare |
| b1152 | ymfP | -0.6 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1567 | intK | -0.6 | -1.3 | Qin prophage; predicted protein (RefSeq) | compare |
| b3960 | argH | -0.6 | -3.7 | argininosuccinate lyase (NCBI) | compare |
| b1726 | yniB | -0.6 | -0.9 | predicted inner membrane protein (NCBI) | compare |
| b2026 | hisI | -0.6 | -2.6 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) | compare |
| b3426 | glpD | -0.6 | -2.1 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1692 | ydiB | -0.6 | -1.9 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b2913 | serA | -0.6 | -2.5 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b3842 | rfaH | -0.6 | -2.3 | transcriptional activator RfaH (NCBI) | compare |
| b1062 | pyrC | -0.6 | -2.7 | dihydroorotase (NCBI) | compare |
| b4118 | melR | -0.6 | -3.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1669 | ydhT | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b3042 | b3042 | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3688 | yidQ | -0.6 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1951 | rcsA | -0.6 | -1.0 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3630 | rfaP | -0.6 | -3.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2071 | yegJ | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -0.6 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2557 | purL | -0.6 | -3.4 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0005 | yaaX | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | -0.6 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3771 | ilvD | -0.6 | -4.0 | dihydroxy-acid dehydratase (NCBI) | compare |
| b2528 | iscA | -0.6 | -0.8 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1150 | ymfR | -0.6 | -0.5 | e14 prophage; predicted protein (NCBI) | compare |
| b4215 | ytfI | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b4313 | fimE | -0.6 | -2.9 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1104 | ycfL | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b1783 | yeaG | -0.6 | -3.0 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b1485 | ddpC | -0.6 | -1.5 | D-ala-D-ala transporter subunit (NCBI) | compare |