| | gene | name | fitness | t score | description | |
|---|
| b3169 | nusA | -4.0 | -4.8 | transcription elongation factor NusA (NCBI) | compare |
| b2567 | rnc | -3.4 | -2.0 | ribonuclease III (NCBI) | compare |
| b3979 | thrT | -3.3 | -0.9 | tRNA-Thr (NCBI) | compare |
| b1332 | ynaJ | -2.8 | -1.1 | predicted inner membrane protein (NCBI) | compare |
| b2846 | yqeH | -2.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2531 | iscR | -2.5 | -2.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2894 | xerD | -2.5 | -1.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3290 | trkA | -2.3 | -3.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0730 | mngR | -2.1 | -2.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2820 | recB | -2.0 | -2.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2504 | yfgG | -2.0 | -2.6 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b0564 | appY | -1.9 | -1.0 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1551 | b1551 | -1.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3390 | aroK | -1.9 | -1.8 | shikimate kinase I (NCBI) | compare |
| b1861 | ruvA | -1.8 | -2.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1058 | yceO | -1.8 | -0.7 | hypothetical protein (NCBI) | compare |
| b2279 | nuoK | -1.7 | -1.6 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.8 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0688 | pgm | -1.7 | -3.7 | phosphoglucomutase (NCBI) | compare |
| b0990 | cspG | -1.7 | -1.1 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1951 | rcsA | -1.7 | -2.2 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1480 | sra | -1.7 | -1.4 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3609 | secB | -1.6 | -2.4 | export protein SecB (NCBI) | compare |
| b2652 | ileY | -1.6 | -1.5 | tRNA-Ile (NCBI) | compare |
| b4458 | oxyS | -1.6 | -1.3 | global regulatory RNA (NCBI) | compare |
| b1557 | cspB | -1.6 | -2.2 | Qin prophage; cold shock protein (NCBI) | compare |
| b2479 | gcvR | -1.6 | -3.7 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1545 | pinQ | -1.5 | -0.4 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1860 | ruvB | -1.5 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b2853 | ygeI | -1.5 | -0.7 | hypothetical protein (NCBI) | compare |
| b1182 | hlyE | -1.5 | -1.0 | hemolysin E (VIMSS) | compare |
| b4685 | yrbN | -1.4 | -2.7 | expressed protein (RefSeq) | compare |
| b3120 | yhaB | -1.4 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0683 | fur | -1.4 | -1.2 | ferric uptake regulator (NCBI) | compare |
| b3426 | glpD | -1.4 | -4.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2433 | b2433 | -1.4 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0145 | dksA | -1.4 | -1.7 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4552 | yrhC | -1.4 | -0.6 | no description | compare |
| b3619 | rfaD | -1.4 | -3.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3811 | xerC | -1.4 | -2.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0242 | proB | -1.4 | -4.7 | gamma-glutamyl kinase (NCBI) | compare |
| b4239 | treC | -1.4 | -3.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b2528 | iscA | -1.4 | -1.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0953 | rmf | -1.4 | -2.0 | ribosome modulation factor (NCBI) | compare |
| b1165 | ymgA | -1.3 | -0.9 | hypothetical protein (NCBI) | compare |
| b1984 | asnW | -1.3 | -1.2 | tRNA-Asn (NCBI) | compare |
| b0439 | lon | -1.3 | -3.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0222 | lpcA | -1.3 | -2.4 | phosphoheptose isomerase (NCBI) | compare |
| b4172 | hfq | -1.3 | -0.8 | RNA-binding protein Hfq (NCBI) | compare |
| b3725 | pstB | -1.2 | -0.9 | phosphate transporter subunit (NCBI) | compare |
| b1837 | yebW | -1.2 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3621 | rfaC | -1.2 | -3.9 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1346 | ydaQ | -1.2 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3386 | rpe | -1.2 | -1.1 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2754 | ygbF | -1.2 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3935 | priA | -1.2 | -2.0 | primosome assembly protein PriA (NCBI) | compare |
| b1361 | ydaW | -1.2 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1103 | ycfF | -1.2 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4426 | isrA | -1.2 | -2.6 | unknown RNA (NCBI) | compare |
| b3728 | pstS | -1.1 | -3.4 | phosphate transporter subunit (NCBI) | compare |
| b4529 | ydbJ | -1.1 | -1.0 | hypothetical protein (NCBI) | compare |
| b2021 | hisC | -1.1 | -3.6 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b1192 | ldcA | -1.1 | -3.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b2188 | yejM | -1.1 | -6.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3162 | deaD | -1.1 | -3.4 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1865 | nudB | -1.1 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2025 | hisF | -1.1 | -1.9 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0658 | ybeX | -1.0 | -1.4 | predicteed ion transport (NCBI) | compare |
| b2912 | ygfA | -1.0 | -1.9 | putative ligase (VIMSS) | compare |
| b3545 | proK | -1.0 | -1.0 | tRNA-Pro (NCBI) | compare |
| b0074 | leuA | -1.0 | -5.1 | 2-isopropylmalate synthase (NCBI) | compare |
| b0737 | tolQ | -1.0 | -2.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2286 | nuoC | -1.0 | -2.5 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1150 | ymfR | -1.0 | -0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b1936 | intG | -1.0 | -1.0 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b4066 | yjcF | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b0071 | leuD | -1.0 | -4.1 | isopropylmalate isomerase small subunit (NCBI) | compare |
| b0072 | leuC | -1.0 | -6.3 | isopropylmalate isomerase large subunit (NCBI) | compare |
| b4590 | ybfK | -1.0 | -0.7 | hypothetical protein (RefSeq) | compare |
| b1783 | yeaG | -1.0 | -4.8 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b2414 | cysK | -1.0 | -4.8 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b0438 | clpX | -1.0 | -3.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1263 | trpD | -1.0 | -2.3 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b4191 | ulaR | -1.0 | -2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0232 | yafN | -1.0 | -0.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3463 | ftsE | -0.9 | -0.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4006 | purH | -0.9 | -5.1 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0002 | thrA | -0.9 | -5.5 | bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) | compare |
| b2859 | ygeO | -0.9 | -2.2 | hypothetical protein (RefSeq) | compare |
| b1290 | sapF | -0.9 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1799 | yeaT | -0.9 | -2.9 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b4048 | yjbM | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b3261 | fis | -0.9 | -1.9 | DNA-binding protein Fis (NCBI) | compare |
| b4128 | yjdK | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b4613 | dinQ | -0.9 | -1.0 | Damage inducible, function unknown (RefSeq) | compare |
| b3774 | ilvC | -0.9 | -6.4 | ketol-acid reductoisomerase (NCBI) | compare |
| b0908 | aroA | -0.9 | -3.6 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1448 | yncA | -0.9 | -2.0 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0890 | ftsK | -0.9 | -3.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0523 | purE | -0.9 | -2.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b3771 | ilvD | -0.9 | -5.3 | dihydroxy-acid dehydratase (NCBI) | compare |
| b1785 | yeaI | -0.9 | -2.6 | predicted diguanylate cyclase (NCBI) | compare |
| b4444 | rygA | -0.9 | -3.2 | unknown RNA (NCBI) | compare |
| b2020 | hisD | -0.9 | -3.7 | histidinol dehydrogenase (NCBI) | compare |
| b4155 | yjeA | -0.9 | -1.0 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3960 | argH | -0.9 | -4.7 | argininosuccinate lyase (NCBI) | compare |
| b0440 | hupB | -0.9 | -4.9 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b0739 | tolA | -0.9 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1772 | b1772 | -0.9 | -3.6 | putative kinase (VIMSS) | compare |
| b1063 | yceB | -0.9 | -2.6 | predicted lipoprotein (NCBI) | compare |
| b0243 | proA | -0.9 | -4.3 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b1259 | yciG | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -0.8 | -3.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0535 | fimZ | -0.8 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2476 | purC | -0.8 | -1.7 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b0003 | thrB | -0.8 | -4.1 | homoserine kinase (NCBI) | compare |
| b0880 | cspD | -0.8 | -1.0 | cold shock protein homolog (NCBI) | compare |
| b1536 | ydeI | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b4410 | ecnA | -0.8 | -1.0 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b0136 | yadK | -0.8 | -3.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0957 | ompA | -0.8 | -2.1 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3631 | rfaG | -0.8 | -5.9 | glucosyltransferase I (NCBI) | compare |
| b4698 | mgrR | -0.8 | -2.0 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b3250 | mreC | -0.8 | -1.4 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b2762 | cysH | -0.8 | -4.1 | phosphoadenosine phosphosulfate reductase (NCBI) | compare |
| b1235 | rssB | -0.8 | -3.0 | response regulator of RpoS (NCBI) | compare |
| b2935 | tktA | -0.8 | -1.3 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3863 | polA | -0.8 | -0.9 | DNA polymerase I (NCBI) | compare |
| b1347 | ydaC | -0.8 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b2281 | nuoI | -0.8 | -1.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0627 | tatE | -0.8 | -1.5 | twin arginine translocase protein E (NCBI) | compare |
| b1138 | ymfE | -0.8 | -1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b0907 | serC | -0.8 | -2.9 | phosphoserine aminotransferase (NCBI) | compare |
| b2022 | hisB | -0.8 | -2.6 | imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) | compare |
| b3281 | aroE | -0.8 | -5.3 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1409 | ynbB | -0.8 | -1.0 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b3773 | ilvY | -0.8 | -4.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1970 | yedX | -0.8 | -2.9 | hypothetical protein (NCBI) | compare |
| b2276 | nuoN | -0.8 | -2.4 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1236 | galU | -0.8 | -2.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0386 | proC | -0.8 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4702 | mgtL | -0.8 | -1.1 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0004 | thrC | -0.8 | -3.7 | threonine synthase (NCBI) | compare |
| b0630 | lipB | -0.8 | -1.2 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4232 | fbp | -0.7 | -3.9 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b1082 | flgK | -0.7 | -2.2 | flagellar hook-associated protein K (NCBI) | compare |
| b2278 | nuoL | -0.7 | -3.8 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1699 | ydiS | -0.7 | -2.3 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b1232 | purU | -0.7 | -2.5 | formyltetrahydrofolate deformylase (NCBI) | compare |
| b0294 | ykgK | -0.7 | -2.3 | predicted regulator (NCBI) | compare |
| b1478 | adhP | -0.7 | -1.6 | alcohol dehydrogenase (VIMSS) | compare |
| b2289 | lrhA | -0.7 | -3.8 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b1188 | ycgB | -0.7 | -3.1 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b2600 | tyrA | -0.7 | -2.6 | fused chorismate mutase T/prephenate dehydrogenase (NCBI) | compare |
| b0310 | ykgH | -0.7 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b2704 | srlB | -0.7 | -1.7 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3761 | trpT | -0.7 | -1.0 | tRNA-Trp (NCBI) | compare |
| b1627 | rsxA | -0.7 | -1.5 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b2297 | pta | -0.7 | -0.5 | phosphate acetyltransferase (NCBI) | compare |
| b3500 | gor | -0.7 | -0.8 | glutathione reductase (NCBI) | compare |
| b3941 | metF | -0.7 | -3.5 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| b0806 | ybiM | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3094 | exuR | -0.7 | -2.5 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b2085 | b2085 | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1205 | ychH | -0.7 | -0.7 | predicted inner membrane protein (NCBI) | compare |
| b0522 | purK | -0.7 | -3.3 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b2024 | hisA | -0.7 | -1.5 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b2429 | murP | -0.7 | -3.5 | N-acetylmuramic acid phosphotransfer permease (NCBI) | compare |
| b2329 | aroC | -0.7 | -2.8 | chorismate synthase (NCBI) | compare |
| b2642 | yfjW | -0.7 | -0.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4005 | purD | -0.7 | -3.2 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b2557 | purL | -0.7 | -4.0 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b4345 | mcrC | -0.7 | -0.6 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b2839 | lysR | -0.7 | -2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1363 | trkG | -0.7 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4313 | fimE | -0.7 | -3.2 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1810 | yoaC | -0.7 | -2.6 | predicted protein (RefSeq) | compare |
| b2284 | nuoF | -0.7 | -1.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2277 | nuoM | -0.7 | -2.3 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1693 | aroD | -0.7 | -2.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2763 | cysI | -0.7 | -3.0 | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | compare |
| b3770 | ilvE | -0.7 | -4.1 | branched-chain amino acid aminotransferase (NCBI) | compare |
| b0740 | tolB | -0.7 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b2822 | recC | -0.7 | -2.2 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4593 | ymgI | -0.7 | -0.6 | hypothetical protein (RefSeq) | compare |
| b1476 | fdnI | -0.6 | -0.6 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3781 | trxA | -0.6 | -1.6 | thioredoxin 1 (VIMSS) | compare |
| b2838 | lysA | -0.6 | -3.7 | diaminopimelate decarboxylase, PLP-binding (NCBI) | compare |
| b1518 | lsrG | -0.6 | -1.2 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1696 | ydiP | -0.6 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2456 | cchB | -0.6 | -2.3 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b2340 | sixA | -0.6 | -1.7 | phosphohistidine phosphatase (NCBI) | compare |
| b0483 | ybaQ | -0.6 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b3772 | ilvA | -0.6 | -4.3 | threonine dehydratase (NCBI) | compare |
| b4215 | ytfI | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b4177 | purA | -0.6 | -1.4 | adenylosuccinate synthetase (NCBI) | compare |
| b1859 | znuB | -0.6 | -2.3 | high-affinity zinc transporter membrane component (NCBI) | compare |
| b0945 | pyrD | -0.6 | -3.5 | dihydroorotate dehydrogenase (NCBI) | compare |