| | gene | name | fitness | t score | description | |
|---|
| b2903 | gcvP | +3.6 | 34.4 | glycine dehydrogenase (NCBI) | compare |
| b2904 | gcvH | +3.5 | 21.8 | glycine cleavage system protein H (NCBI) | compare |
| b2905 | gcvT | +3.2 | 19.4 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b2808 | gcvA | +2.8 | 18.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3181 | greA | +1.9 | 16.2 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2947 | gshB | +1.5 | 9.2 | glutathione synthetase (NCBI) | compare |
| b2688 | gshA | +1.4 | 12.2 | glutamate--cysteine ligase (NCBI) | compare |
| b2829 | ptsP | +1.3 | 10.2 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b2830 | nudH | +1.3 | 3.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0059 | hepA | +1.2 | 11.6 | ATP-dependent helicase HepA (NCBI) | compare |
| b3206 | npr | +1.2 | 7.8 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4066 | yjcF | +1.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b3778 | rep | +1.2 | 8.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2951 | yggS | +1.1 | 7.2 | predicted enzyme (NCBI) | compare |
| b4203 | rplI | +1.0 | 7.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b1085 | b1085 | +1.0 | 4.6 | orf, hypothetical protein (VIMSS) | compare |
| b0658 | ybeX | +1.0 | 2.7 | predicteed ion transport (NCBI) | compare |
| b2183 | rsuA | +1.0 | 5.3 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b2579 | yfiD | +0.9 | 3.9 | pyruvate formate lyase subunit (NCBI) | compare |
| b2259 | pmrD | +0.9 | 1.9 | polymyxin resistance protein B (VIMSS) | compare |
| b1824 | yobF | +0.9 | 3.3 | hypothetical protein (NCBI) | compare |
| b2642 | yfjW | +0.8 | 1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0882 | clpA | +0.8 | 7.0 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | compare |
| b1279 | yciS | +0.8 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b0889 | lrp | +0.8 | 3.0 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1095 | fabF | +0.8 | 6.5 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1038 | csgF | +0.8 | 3.3 | predicted transport protein (NCBI) | compare |
| b0949 | uup | +0.8 | 5.4 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1847 | yebF | +0.7 | 1.5 | predicted protein (RefSeq) | compare |
| b2114 | metG | +0.7 | 1.7 | methionyl-tRNA synthetase (NCBI) | compare |
| b4426 | isrA | +0.7 | 2.2 | unknown RNA (NCBI) | compare |
| b4552 | yrhC | +0.7 | 1.3 | no description | compare |
| b3977 | tyrU | +0.7 | 1.4 | tRNA-Tyr (NCBI) | compare |
| b4171 | miaA | +0.7 | 3.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0381 | ddlA | +0.7 | 4.8 | D-alanylalanine synthetase (NCBI) | compare |
| b2937 | speB | +0.7 | 5.1 | agmatinase (NCBI) | compare |
| b4699 | fnrS | +0.7 | 1.2 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1333 | uspE | +0.7 | 4.4 | stress-induced protein (NCBI) | compare |
| b4647 | mokA | +0.7 | 0.9 | no description | compare |
| b0178 | hlpA | +0.7 | 3.5 | periplasmic chaperone (NCBI) | compare |
| b1273 | yciN | +0.7 | 1.8 | hypothetical protein (NCBI) | compare |
| b1190 | dadX | +0.7 | 3.7 | alanine racemase (NCBI) | compare |
| b0852 | rimK | +0.7 | 3.0 | ribosomal protein S6 modification protein (NCBI) | compare |
| b4141 | yjeH | +0.6 | 5.7 | predicted transporter (NCBI) | compare |
| b3261 | fis | +0.6 | 2.1 | DNA-binding protein Fis (NCBI) | compare |
| b3164 | pnp | +0.6 | 1.9 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4373 | rimI | +0.6 | 3.1 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b4163 | glyV | +0.6 | 2.1 | tRNA-Gly (NCBI) | compare |
| b4701 | sokX | +0.6 | 1.1 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0866 | ybjQ | +0.6 | 1.4 | hypothetical protein (NCBI) | compare |
| b1222 | narX | +0.6 | 2.8 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b1346 | ydaQ | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4042 | dgkA | +0.6 | 1.6 | diacylglycerol kinase (NCBI) | compare |
| b3755 | yieP | +0.6 | 4.6 | predicted transcriptional regulator (NCBI) | compare |
| b1595 | ynfL | +0.6 | 2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1606 | folM | +0.6 | 4.4 | short chain dehydrogenase (NCBI) | compare |
| b1493 | gadB | +0.6 | 0.8 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1823 | cspC | +0.6 | 2.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b0854 | potF | +0.6 | 3.4 | putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b2494 | yfgC | +0.5 | 4.0 | predicted peptidase (NCBI) | compare |
| b3443 | yrhA | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1890 | motA | +0.5 | 2.9 | flagellar motor protein MotA (NCBI) | compare |
| b0934 | ycbM | +0.5 | 2.5 | putative transport system permease protein (VIMSS) | compare |
| b3806 | cyaA | +0.5 | 2.9 | adenylate cyclase (NCBI) | compare |
| b4256 | yjgM | +0.5 | 3.9 | predicted acetyltransferase (NCBI) | compare |
| b1066 | rimJ | +0.5 | 3.3 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b1739 | osmE | +0.5 | 1.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b2136 | yohD | +0.5 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4135 | yjdC | +0.5 | 3.0 | orf, hypothetical protein (VIMSS) | compare |
| b2811 | ygdK | +0.5 | 3.0 | predicted Fe-S metabolism protein (NCBI) | compare |
| b2421 | cysM | +0.5 | 2.6 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b3194 | yrbE | +0.5 | 3.5 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1604 | ydgH | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b1482 | osmC | +0.5 | 0.7 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3632 | rfaQ | +0.5 | 4.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0783 | moaC | +0.5 | 2.3 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1362 | rzpR | +0.4 | 1.8 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b3929 | rraA | +0.4 | 3.5 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b1141 | ymfG | +0.4 | 1.2 | e14 prophage; predicted excisionase (NCBI) | compare |
| b1438 | ydcQ | +0.4 | 1.4 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0605 | ahpC | +0.4 | 2.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b0685 | ybfE | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1013 | ycdC | +0.4 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2896 | ygfX | +0.4 | 2.6 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1041 | csgB | +0.4 | 2.3 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b2303 | folX | +0.4 | 3.2 | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase (NCBI) | compare |
| b1164 | ycgZ | +0.4 | 1.0 | hypothetical protein (NCBI) | compare |
| b2646 | ypjF | +0.4 | 1.3 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b0527 | ybcI | +0.4 | 2.7 | conserved inner membrane protein (NCBI) | compare |
| b0714 | nei | +0.4 | 2.3 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b0218 | yafU | +0.4 | 1.2 | predicted inner membrane protein (RefSeq) | compare |
| b1070 | flgN | +0.4 | 1.0 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b0857 | potI | +0.4 | 2.1 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0856 | potH | +0.4 | 2.9 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1388 | paaA | +0.4 | 2.6 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b4151 | frdD | +0.4 | 2.2 | fumarate reductase subunit D (NCBI) | compare |
| b1480 | sra | +0.4 | 0.7 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3617 | kbl | +0.4 | 2.9 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b0641 | rlpB | +0.4 | 1.7 | minor lipoprotein (NCBI) | compare |
| b4603 | rseX | +0.4 | 0.5 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4545 | ypdJ | +0.4 | 1.0 | no description | compare |
| b2572 | rseA | +0.4 | 2.6 | anti-sigma factor (NCBI) | compare |
| b1685 | ydiH | +0.4 | 0.9 | predicted protein (RefSeq) | compare |
| b0563 | tfaX | +0.4 | 2.5 | DLP12 prophage; predicted protein (RefSeq) | compare |
| b1341 | b1341 | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1394 | paaG | +0.4 | 1.1 | enoyl-CoA hydratase (NCBI) | compare |
| b1528 | ydeA | +0.4 | 2.9 | sugar efflux transporter (NCBI) | compare |
| b2111 | yehD | +0.4 | 1.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4511 | ybdZ | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b4030 | yjbA | +0.4 | 2.5 | phosphate-starvation-inducible protein PsiE (NCBI) | compare |
| b1871 | yecP | +0.4 | 1.9 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b4570 | lomR | +0.4 | 1.2 | no description | compare |
| b2587 | kgtP | +0.4 | 2.6 | alpha-ketoglutarate transporter (NCBI) | compare |
| b1366 | ydaY | +0.4 | 1.9 | Rac prophage; predicted protein (RefSeq) | compare |
| b1575 | dicB | +0.4 | 0.9 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2341 | yfcX | +0.4 | 2.8 | fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) | compare |
| b4504 | ykfH | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1075 | flgD | +0.4 | 1.6 | flagellar basal body rod modification protein D (NCBI) | compare |
| b1573 | ydfC | +0.4 | 1.0 | Qin prophage; predicted protein (RefSeq) | compare |
| b3503 | arsC | +0.4 | 2.9 | arsenate reductase (NCBI) | compare |
| b3934 | cytR | +0.4 | 3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3769 | ilvM | +0.4 | 1.3 | acetolactate synthase II, small subunit (NCBI) | compare |
| b0556 | rzpD | +0.4 | 2.0 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b3869 | glnL | +0.4 | 2.8 | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | compare |
| b2786 | barA | +0.4 | 3.4 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | compare |
| b1037 | csgG | +0.4 | 2.8 | outer membrane lipoprotein (NCBI) | compare |
| b0401 | brnQ | +0.4 | 2.9 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b4190 | yjfP | +0.4 | 2.4 | predicted hydrolase (NCBI) | compare |
| b4000 | hupA | +0.4 | 2.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b4503 | yafF | +0.4 | 0.6 | no description | compare |
| b1818 | manY | +0.4 | 1.6 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b3009 | yghB | +0.4 | 2.4 | conserved inner membrane protein (NCBI) | compare |
| b2061 | wzb | +0.4 | 1.3 | protein-tyrosine phosphatase (NCBI) | compare |
| b2314 | dedD | +0.3 | 1.7 | putative lipoprotein (VIMSS) | compare |
| b0456 | ybaA | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b4598 | yncL | +0.3 | 1.3 | hypothetical protein (RefSeq) | compare |
| b0627 | tatE | +0.3 | 1.3 | twin arginine translocase protein E (NCBI) | compare |
| b1648 | b1648 | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3867 | hemN | +0.3 | 3.0 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b1914 | uvrY | +0.3 | 2.3 | response regulator (NCBI) | compare |
| b0830 | yliB | +0.3 | 3.0 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b1090 | plsX | +0.3 | 1.7 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b3351 | kefG | +0.3 | 2.3 | glutathione-regulated potassium-efflux system ancillary protein (NCBI) | compare |
| b4594 | ymgJ | +0.3 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1634 | tppB | +0.3 | 1.9 | putative tripeptide transporter permease (NCBI) | compare |
| b1627 | rsxA | +0.3 | 1.7 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b2794 | yqcD | +0.3 | 2.3 | hypothetical protein (NCBI) | compare |
| b3675 | yidG | +0.3 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b4391 | yjjK | +0.3 | 2.7 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1383 | ydbL | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2989 | b2989 | +0.3 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1153 | ymfQ | +0.3 | 2.3 | e14 prophage; conserved protein (NCBI) | compare |
| b2410 | yfeH | +0.3 | 1.9 | predicted inner membrane protein (NCBI) | compare |
| b2377 | yfdY | +0.3 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b3616 | tdh | +0.3 | 2.2 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1171 | b1171 | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2447 | yffP | +0.3 | 1.5 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0249 | ykfF | +0.3 | 1.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0979 | appB | +0.3 | 2.0 | cytochrome bd-II oxidase, subunit II (NCBI) | compare |
| b4110 | yjcZ | +0.3 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0955 | ycbZ | +0.3 | 2.3 | predicted peptidase (NCBI) | compare |
| b0199 | metN | +0.3 | 2.5 | DL-methionine transporter subunit (NCBI) | compare |
| b4402 | yjjY | +0.3 | 0.5 | hypothetical protein (NCBI) | compare |
| b1916 | sdiA | +0.3 | 2.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b3562 | yiaA | +0.3 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1642 | slyA | +0.3 | 1.0 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0686 | ybfF | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b3243 | aaeR | +0.3 | 1.3 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b1380 | ldhA | +0.3 | 0.9 | D-lactate dehydrogenase (NCBI) | compare |
| b0227 | yafL | +0.3 | 1.6 | predicted lipoprotein and C40 family peptidase (NCBI) | compare |
| b1954 | dsrA | +0.3 | 1.0 | regulatory antisense RNA (NCBI) | compare |
| b2510 | b2510 | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1558 | cspF | +0.3 | 1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b2935 | tktA | +0.3 | 1.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0855 | potG | +0.3 | 2.1 | ATP-binding component of putrescine transport system (VIMSS) | compare |
| b1755 | ynjC | +0.3 | 1.9 | fused transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b4631 | ykgQ | +0.3 | 0.8 | no description | compare |
| b0970 | yccA | +0.3 | 1.7 | inner membrane protein (NCBI) | compare |
| b0198 | metI | +0.3 | 2.5 | DL-methionine transporter subunit (NCBI) | compare |
| b1278 | pgpB | +0.3 | 1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b0991 | ymcE | +0.3 | 1.4 | cold shock gene (NCBI) | compare |
| b0339 | cynT | +0.3 | 2.0 | carbonic anhydrase (NCBI) | compare |
| b0404 | yajB | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b4413 | sokC | +0.3 | 0.7 | regulatory antisense RNA (NCBI) | compare |
| b1104 | ycfL | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b0643 | ybeL | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b0806 | ybiM | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4227 | ytfQ | +0.3 | 1.6 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b3392 | yrfA | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0209 | yafD | +0.3 | 2.4 | hypothetical protein (NCBI) | compare |
| b1831 | proQ | +0.3 | 1.0 | putative solute/DNA competence effector (NCBI) | compare |
| b1566 | flxA | +0.3 | 1.5 | Qin prophage; predicted protein (NCBI) | compare |
| b4232 | fbp | +0.3 | 2.5 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b2175 | spr | +0.3 | 1.8 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0784 | moaD | +0.3 | 1.7 | molybdopterin synthase, small subunit (NCBI) | compare |
| b4260 | pepA | +0.3 | 2.5 | leucyl aminopeptidase (NCBI) | compare |
| b2419 | yfeK | +0.3 | 0.9 | hypothetical protein (NCBI) | compare |
| b2074 | b2074 | +0.3 | 1.9 | putative membrane protein (VIMSS) | compare |
| b3391 | hofQ | +0.3 | 2.2 | predicted fimbrial transporter (NCBI) | compare |