| | gene | name | fitness | t score | description | |
|---|
| b3261 | fis | +1.7 | 7.5 | DNA-binding protein Fis (NCBI) | compare |
| b3341 | rpsG | +1.6 | 2.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b4647 | mokA | +1.4 | 1.9 | no description | compare |
| b3500 | gor | +1.1 | 3.3 | glutathione reductase (NCBI) | compare |
| b3229 | sspA | +1.1 | 3.8 | stringent starvation protein A (NCBI) | compare |
| b2642 | yfjW | +1.0 | 1.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1823 | cspC | +1.0 | 3.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b2259 | pmrD | +0.9 | 1.7 | polymyxin resistance protein B (VIMSS) | compare |
| b2741 | rpoS | +0.9 | 6.4 | RNA polymerase sigma factor (NCBI) | compare |
| b1422 | ydcI | +0.9 | 5.6 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b0014 | dnaK | +0.9 | 2.4 | molecular chaperone DnaK (NCBI) | compare |
| b1183 | umuD | +0.8 | 1.5 | DNA polymerase V, subunit D (NCBI) | compare |
| b4585 | sroB | +0.8 | 1.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b1429 | tehA | +0.8 | 0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1954 | dsrA | +0.8 | 2.6 | regulatory antisense RNA (NCBI) | compare |
| b0912 | ihfB | +0.8 | 4.1 | integration host factor subunit beta (NCBI) | compare |
| b3120 | yhaB | +0.8 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2911 | ssrS | +0.7 | 1.7 | 6S regulatory RNA (NCBI) | compare |
| b1765 | ydjA | +0.7 | 1.1 | predicted oxidoreductase (NCBI) | compare |
| b0508 | hyi | +0.7 | 3.9 | hydroxypyruvate isomerase (NCBI) | compare |
| b2814 | metZ | +0.7 | 1.9 | tRNA-Met (NCBI) | compare |
| b1476 | fdnI | +0.7 | 1.2 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1550 | b1550 | +0.7 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1273 | yciN | +0.7 | 1.7 | hypothetical protein (NCBI) | compare |
| b2055 | wcaE | +0.7 | 0.6 | predicted glycosyl transferase (NCBI) | compare |
| b4171 | miaA | +0.7 | 2.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1946 | fliN | +0.7 | 1.7 | flagellar motor switch protein (NCBI) | compare |
| b1302 | puuE | +0.7 | 2.7 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b4128 | yjdK | +0.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b4655 | ythA | +0.6 | 1.0 | expressed protein (RefSeq) | compare |
| b1739 | osmE | +0.6 | 1.9 | DNA-binding transcriptional activator (NCBI) | compare |
| b0806 | ybiM | +0.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1252 | tonB | +0.6 | 2.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1824 | yobF | +0.6 | 2.6 | hypothetical protein (NCBI) | compare |
| b1847 | yebF | +0.6 | 1.7 | predicted protein (RefSeq) | compare |
| b1095 | fabF | +0.6 | 4.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0866 | ybjQ | +0.6 | 1.2 | hypothetical protein (NCBI) | compare |
| b1351 | racC | +0.6 | 0.9 | Rac prophage; predicted protein (NCBI) | compare |
| b1557 | cspB | +0.6 | 1.6 | Qin prophage; cold shock protein (NCBI) | compare |
| b2114 | metG | +0.6 | 1.7 | methionyl-tRNA synthetase (NCBI) | compare |
| b4692 | oweE | +0.6 | 1.3 | no description | compare |
| b1380 | ldhA | +0.6 | 1.9 | D-lactate dehydrogenase (NCBI) | compare |
| b1074 | flgC | +0.6 | 2.2 | flagellar basal-body rod protein C (NCBI) | compare |
| b4450 | arcZ | +0.6 | 2.0 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b1926 | fliT | +0.6 | 2.4 | predicted chaperone (NCBI) | compare |
| b1758 | b1758 | +0.6 | 1.1 | putative cytochrome oxidase (VIMSS) | compare |
| b0632 | dacA | +0.6 | 3.5 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2376 | ypdI | +0.5 | 2.2 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b4172 | hfq | +0.5 | 0.7 | RNA-binding protein Hfq (NCBI) | compare |
| b0661 | miaB | +0.5 | 3.9 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b4522 | yciX_1 | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b4163 | glyV | +0.5 | 1.5 | tRNA-Gly (NCBI) | compare |
| b4596 | yciZ | +0.5 | 1.5 | hypothetical protein (RefSeq) | compare |
| b2742 | nlpD | +0.5 | 3.5 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1156 | tfaE | +0.5 | 2.8 | e14 prophage; predicted tail fiber assembly protein (NCBI) | compare |
| b4594 | ymgJ | +0.5 | 1.4 | hypothetical protein (RefSeq) | compare |
| b4202 | rpsR | +0.5 | 1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b3890 | yiiF | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2293 | yfbT | +0.5 | 2.5 | putative phosphatase (VIMSS) | compare |
| b2058 | wcaB | +0.5 | 1.0 | predicted acyl transferase (NCBI) | compare |
| b2618 | b2618 | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2136 | yohD | +0.5 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1085 | b1085 | +0.5 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4520 | ymgF | +0.5 | 1.1 | hypothetical protein (NCBI) | compare |
| b4426 | isrA | +0.5 | 2.0 | unknown RNA (NCBI) | compare |
| b3836 | b3836 | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1629 | rsxC | +0.5 | 3.2 | electron transport complex protein RnfC (NCBI) | compare |
| b0382 | yaiB | +0.5 | 3.5 | hypothetical protein (NCBI) | compare |
| b0059 | hepA | +0.5 | 4.3 | ATP-dependent helicase HepA (NCBI) | compare |
| b0888 | trxB | +0.5 | 2.3 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1950 | fliR | +0.5 | 1.6 | flagellar biosynthesis protein R (NCBI) | compare |
| b1217 | chaB | +0.5 | 1.1 | cation transport regulator (NCBI) | compare |
| b0746 | valZ | +0.5 | 1.7 | tRNA-Val (NCBI) | compare |
| b3239 | yhcO | +0.5 | 2.2 | predicted barnase inhibitor (NCBI) | compare |
| b1006 | ycdG | +0.5 | 2.0 | putative transport protein (VIMSS) | compare |
| b1939 | fliG | +0.5 | 2.9 | flagellar motor switch protein G (NCBI) | compare |
| b1874 | cutC | +0.5 | 1.9 | copper homeostasis protein (NCBI) | compare |
| b0872 | hcr | +0.4 | 2.2 | HCP oxidoreductase, NADH-dependent (NCBI) | compare |
| b1040 | csgD | +0.4 | 1.2 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1155 | ymfS | +0.4 | 1.8 | e14 prophage; predicted protein (NCBI) | compare |
| b2829 | ptsP | +0.4 | 3.8 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3753 | rbsR | +0.4 | 3.5 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b1604 | ydgH | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b4000 | hupA | +0.4 | 1.8 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1243 | oppA | +0.4 | 2.5 | oligopeptide transporter subunit (NCBI) | compare |
| b4418 | sraB | +0.4 | 1.3 | unknown RNA (NCBI) | compare |
| b2236 | yfaE | +0.4 | 2.3 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b1513 | lsrA | +0.4 | 1.5 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2935 | tktA | +0.4 | 1.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0238 | gpt | +0.4 | 1.8 | xanthine phosphoribosyltransferase (NCBI) | compare |
| b4701 | sokX | +0.4 | 0.6 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4461 | yfjD | +0.4 | 2.7 | predicted inner membrane protein (RefSeq) | compare |
| b1306 | pspC | +0.4 | 2.0 | DNA-binding transcriptional activator (NCBI) | compare |
| b3181 | greA | +0.4 | 1.9 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1583 | ynfB | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b0542 | renD | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0780 | ybhK | +0.4 | 3.1 | predicted transferase with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b1236 | galU | +0.4 | 2.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1773 | ydjI | +0.4 | 1.4 | predicted aldolase (NCBI) | compare |
| b0773 | ybhB | +0.4 | 3.0 | predicted kinase inhibitor (NCBI) | compare |
| b1671 | ydhX | +0.4 | 0.8 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b1822 | rrmA | +0.4 | 1.5 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b4217 | ytfK | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3644 | yicC | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b0310 | ykgH | +0.4 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b4071 | nrfB | +0.4 | 1.8 | formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) | compare |
| b2080 | b2080 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2448 | yffQ | +0.4 | 1.4 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3183 | obgE | +0.4 | 0.7 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1041 | csgB | +0.4 | 1.8 | curlin nucleator protein, minor subunit in curli complex (NCBI) | compare |
| b4545 | ypdJ | +0.4 | 1.0 | no description | compare |
| b4603 | rseX | +0.4 | 0.4 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1073 | flgB | +0.4 | 2.3 | flagellar basal-body rod protein B (NCBI) | compare |
| b1920 | fliY | +0.4 | 0.7 | cystine transporter subunit (NCBI) | compare |
| b0836 | yliH | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b4329 | yjiG | +0.4 | 2.6 | conserved inner membrane protein (NCBI) | compare |
| b1601 | ydgG | +0.4 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b1465 | narV | +0.4 | 1.4 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b0627 | tatE | +0.4 | 0.8 | twin arginine translocase protein E (NCBI) | compare |
| b2646 | ypjF | +0.4 | 1.2 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1644 | b1644 | +0.4 | 2.1 | putative membrane protein (VIMSS) | compare |
| b2726 | hypA | +0.4 | 1.9 | protein involved in nickel insertion into hydrogenases 3 (NCBI) | compare |
| b1731 | cedA | +0.4 | 1.3 | cell division modulator (RefSeq) | compare |
| b4642 | yoeD | +0.4 | 1.0 | no description | compare |
| b4279 | yjhB | +0.4 | 0.4 | putative transport protein (VIMSS) | compare |
| b0212 | gloB | +0.4 | 1.5 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b1566 | flxA | +0.4 | 1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b2214 | yojL | +0.4 | 1.8 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b2012 | yeeD | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b1984 | asnW | +0.4 | 0.7 | tRNA-Asn (NCBI) | compare |
| b4194 | ulaB | +0.4 | 2.2 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b2445 | yffN | +0.4 | 2.1 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4453 | ldrD | +0.4 | 1.4 | toxic polypeptide, small (NCBI) | compare |
| b1383 | ydbL | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3260 | dusB | +0.4 | 1.6 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1591 | b1591 | +0.4 | 1.2 | putative oxidoreductase component (VIMSS) | compare |
| b3208 | mtgA | +0.4 | 2.4 | monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) | compare |
| b3250 | mreC | +0.4 | 0.9 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1628 | rsxB | +0.4 | 0.9 | electron transport complex protein RnfB (NCBI) | compare |
| b1516 | lsrB | +0.4 | 1.4 | AI2 transporter (NCBI) | compare |
| b2919 | ygfG | +0.4 | 1.7 | putative enzyme (VIMSS) | compare |
| b3405 | ompR | +0.4 | 2.0 | osmolarity response regulator (NCBI) | compare |
| b1961 | dcm | +0.3 | 0.9 | DNA cytosine methylase (NCBI) | compare |
| b4402 | yjjY | +0.3 | 0.5 | hypothetical protein (NCBI) | compare |
| b1597 | asr | +0.3 | 1.9 | acid shock protein (VIMSS) | compare |
| b0521 | ybcF | +0.3 | 1.2 | predicted carbamate kinase (NCBI) | compare |
| b4648 | ysaC | +0.3 | 1.1 | no description | compare |
| b1733 | chbG | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1426 | ydcH | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2502 | ppx | +0.3 | 2.1 | exopolyphosphatase (NCBI) | compare |
| b1271 | yciK | +0.3 | 1.2 | short chain dehydrogenase (NCBI) | compare |
| b4294 | insA-7 | +0.3 | 1.1 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b4646 | yrdE | +0.3 | 1.2 | no description | compare |
| b0623 | cspE | +0.3 | 1.1 | cold shock protein E (NCBI) | compare |
| b2447 | yffP | +0.3 | 1.8 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0965 | b0965 | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4598 | yncL | +0.3 | 1.0 | hypothetical protein (RefSeq) | compare |
| b3134 | agaW | +0.3 | 0.9 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b4394 | yjjX | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1573 | ydfC | +0.3 | 0.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b2006 | yeeW | +0.3 | 1.6 | CP4-44 prophage; predicted protein (RefSeq) | compare |
| b1540 | ydfH | +0.3 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1072 | flgA | +0.3 | 1.9 | flagellar basal body P-ring biosynthesis protein A (NCBI) | compare |
| b4497 | yeeL | +0.3 | 0.7 | no description | compare |
| b0404 | yajB | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1842 | holE | +0.3 | 0.6 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1250 | kch | +0.3 | 2.0 | voltage-gated potassium channel (NCBI) | compare |
| b4631 | ykgQ | +0.3 | 0.8 | no description | compare |
| b2173 | yeiR | +0.3 | 2.3 | predicted enzyme (NCBI) | compare |
| b1630 | rsxD | +0.3 | 1.9 | electron transport complex protein RnfD (NCBI) | compare |
| b0296 | ykgM | +0.3 | 1.3 | 50S ribosomal protein L31 (NCBI) | compare |
| b1623 | add | +0.3 | 1.5 | adenosine deaminase (NCBI) | compare |
| b4049 | dusA | +0.3 | 2.3 | tRNA-dihydrouridine synthase A (RefSeq) | compare |
| b1753 | ynjA | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b4451 | ryhB | +0.3 | 0.8 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b0240 | crl | +0.3 | 2.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3999 | yjaG | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b0183 | rnhB | +0.3 | 1.5 | ribonuclease HII (NCBI) | compare |
| b0998 | torD | +0.3 | 0.6 | chaperone protein TorD (NCBI) | compare |
| b1679 | sufE | +0.3 | 1.3 | cysteine desufuration protein SufE (NCBI) | compare |
| b0880 | cspD | +0.3 | 0.9 | cold shock protein homolog (NCBI) | compare |
| b2492 | focB | +0.3 | 1.8 | predicted formate transporter (NCBI) | compare |
| b1489 | b1489 | +0.3 | 2.0 | putative enzyme (VIMSS) | compare |
| b1366 | ydaY | +0.3 | 1.2 | Rac prophage; predicted protein (RefSeq) | compare |
| b1790 | yeaM | +0.3 | 1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0423 | thiI | +0.3 | 1.8 | thiamine biosynthesis protein ThiI (NCBI) | compare |
| b1931 | yedK | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1518 | lsrG | +0.3 | 0.9 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1820 | yobD | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b1621 | malX | +0.3 | 1.8 | fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component (NCBI) | compare |
| b3354 | yheU | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b4373 | rimI | +0.3 | 1.4 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b2954 | yggV | +0.3 | 1.4 | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | compare |
| b1977 | asnT | +0.3 | 0.9 | tRNA-Asn (NCBI) | compare |
| b1144 | ymfJ | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1453 | ansP | +0.3 | 1.6 | L-asparagine permease (VIMSS) | compare |
| b4094 | phnN | +0.3 | 1.5 | ribose 1,5-bisphosphokinase (NCBI) | compare |
| b1767 | ansA | +0.3 | 1.5 | cytoplasmic asparaginase I (NCBI) | compare |
| b1943 | fliK | +0.3 | 2.0 | flagellar hook-length control protein (NCBI) | compare |
| b1339 | abgR | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |