Experiment set56IT082 for Escherichia coli BW25113

LB Anaerobic Allura Red AC 250 uM

Group: stress
Media: LB + Allura Red AC (250 uM) + Dimethyl Sulfoxide (1 vol%)
Culturing: Keio_ML9a, microplate, Anaerobic, at 37 (C), shaken=0 rpm
By: Lindsey on 2/15/22
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 4 genes in this experiment

For stress Allura Red AC in Escherichia coli BW25113

For stress Allura Red AC across organisms

SEED Subsystems

Subsystem	#Specific
Acid resistance mechanisms	1
Polyamine Metabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Urea cycle and metabolism of amino groups
• Arginine and proline metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
spermine and spermidine degradation I	5	2	2
putrescine degradation III	4	2	1