| | gene | name | fitness | t score | description | |
|---|
| b1334 | fnr | -3.9 | -5.7 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4237 | nrdG | -3.4 | -14.6 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -3.2 | -20.9 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b1830 | prc | -3.1 | -2.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2808 | gcvA | -3.0 | -5.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4218 | ytfL | -3.0 | -11.8 | predicted inner membrane protein (NCBI) | compare |
| b4171 | miaA | -3.0 | -2.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0688 | pgm | -2.8 | -3.3 | phosphoglucomutase (NCBI) | compare |
| b2318 | truA | -2.7 | -3.7 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0049 | apaH | -2.7 | -1.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b3842 | rfaH | -2.7 | -5.0 | transcriptional activator RfaH (NCBI) | compare |
| b4242 | mgtA | -2.5 | -6.9 | magnesium transporter (NCBI) | compare |
| b0145 | dksA | -2.5 | -4.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2017 | yefM | -2.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0051 | ksgA | -2.5 | -6.5 | dimethyladenosine transferase (NCBI) | compare |
| b3052 | rfaE | -2.5 | -1.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3620 | rfaF | -2.4 | -1.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0222 | lpcA | -2.4 | -2.3 | phosphoheptose isomerase (NCBI) | compare |
| b0632 | dacA | -2.3 | -9.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3630 | rfaP | -2.2 | -4.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2912 | ygfA | -2.2 | -2.6 | putative ligase (VIMSS) | compare |
| b4375 | prfC | -2.2 | -5.2 | peptide chain release factor 3 (NCBI) | compare |
| b4702 | mgtL | -2.2 | -1.5 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2501 | ppk | -2.1 | -10.7 | polyphosphate kinase (NCBI) | compare |
| b0908 | aroA | -2.1 | -11.8 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3237 | argR | -2.0 | -5.4 | arginine repressor (NCBI) | compare |
| b3621 | rfaC | -2.0 | -1.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0386 | proC | -1.9 | -3.7 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2330 | yfcB | -1.9 | -2.5 | putative adenine-specific methylase (VIMSS) | compare |
| b4146 | yjeK | -1.8 | -1.3 | predicted lysine aminomutase (NCBI) | compare |
| b0902 | pflA | -1.8 | -9.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b3469 | zntA | -1.8 | -9.2 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0926 | ycbK | -1.8 | -8.8 | hypothetical protein (NCBI) | compare |
| b4025 | pgi | -1.8 | -9.8 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4174 | hflK | -1.7 | -11.0 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b4647 | mokA | -1.7 | -1.5 | no description | compare |
| b3021 | ygiT | -1.7 | -3.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4245 | pyrB | -1.7 | -3.7 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1192 | ldcA | -1.7 | -3.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b4481 | rffT | -1.7 | -4.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3977 | tyrU | -1.6 | -1.2 | tRNA-Tyr (NCBI) | compare |
| b1438 | ydcQ | -1.6 | -2.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0903 | pflB | -1.6 | -11.4 | pyruvate formate lyase I (NCBI) | compare |
| b1290 | sapF | -1.6 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3790 | rffC | -1.5 | -3.6 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2329 | aroC | -1.5 | -4.3 | chorismate synthase (NCBI) | compare |
| b4179 | vacB | -1.5 | -4.9 | putative enzyme (VIMSS) | compare |
| b3631 | rfaG | -1.5 | -8.4 | glucosyltransferase I (NCBI) | compare |
| b3836 | b3836 | -1.5 | -5.9 | orf, hypothetical protein (VIMSS) | compare |
| b4175 | hflC | -1.5 | -8.6 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3838 | tatB | -1.5 | -7.0 | sec-independent translocase (NCBI) | compare |
| b3916 | pfkA | -1.5 | -2.9 | 6-phosphofructokinase (NCBI) | compare |
| b3792 | wzxE | -1.5 | -1.4 | O-antigen translocase (NCBI) | compare |
| b1584 | speG | -1.5 | -8.4 | spermidine N1-acetyltransferase (NCBI) | compare |
| b1286 | rnb | -1.5 | -2.4 | exoribonuclease II (NCBI) | compare |
| b0142 | folK | -1.5 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4593 | ymgI | -1.4 | -1.0 | hypothetical protein (RefSeq) | compare |
| b0400 | phoR | -1.4 | -7.6 | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | compare |
| b3706 | trmE | -1.4 | -2.3 | tRNA modification GTPase (NCBI) | compare |
| b0677 | nagA | -1.4 | -5.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1281 | pyrF | -1.4 | -2.4 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b2832 | ygdQ | -1.4 | -6.7 | predicted inner membrane protein (NCBI) | compare |
| b4414 | tff | -1.4 | -1.7 | unknown RNA (NCBI) | compare |
| b0232 | yafN | -1.4 | -0.8 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3619 | rfaD | -1.4 | -0.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0439 | lon | -1.4 | -3.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3082 | ygjM | -1.3 | -0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1236 | galU | -1.3 | -1.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3786 | rffE | -1.3 | -8.5 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0764 | modB | -1.3 | -5.0 | molybdate ABC transporter permease protein (NCBI) | compare |
| b3791 | rffA | -1.3 | -4.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4698 | mgrR | -1.3 | -3.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b3787 | rffD | -1.3 | -6.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3741 | gidA | -1.3 | -1.2 | glucose-inhibited division protein A (NCBI) | compare |
| b1850 | eda | -1.3 | -2.5 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1241 | adhE | -1.2 | -8.9 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b0730 | mngR | -1.2 | -1.9 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1506 | yneL | -1.2 | -2.0 | predicted transcriptional regulator (NCBI) | compare |
| b4053 | alr | -1.2 | -7.7 | alanine racemase (NCBI) | compare |
| b1523 | yneG | -1.2 | -2.9 | hypothetical protein (NCBI) | compare |
| b3613 | yibP | -1.2 | -0.8 | putative membrane protein (VIMSS) | compare |
| b3839 | tatC | -1.2 | -1.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0949 | uup | -1.2 | -6.8 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2567 | rnc | -1.2 | -0.8 | ribonuclease III (NCBI) | compare |
| b0032 | carA | -1.2 | -3.4 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b4203 | rplI | -1.2 | -4.8 | 50S ribosomal protein L9 (NCBI) | compare |
| b0685 | ybfE | -1.2 | -3.8 | orf, hypothetical protein (VIMSS) | compare |
| b1591 | b1591 | -1.2 | -2.8 | putative oxidoreductase component (VIMSS) | compare |
| b3387 | dam | -1.2 | -5.4 | DNA adenine methylase (NCBI) | compare |
| b3426 | glpD | -1.2 | -0.8 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b0765 | modC | -1.2 | -6.0 | molybdate transporter subunit (NCBI) | compare |
| b2620 | smpB | -1.1 | -1.2 | SsrA-binding protein (NCBI) | compare |
| b3611 | yibN | -1.1 | -3.6 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b0200 | gmhB | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b0009 | mog | -1.1 | -6.4 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b0437 | clpP | -1.1 | -0.8 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2071 | yegJ | -1.1 | -2.1 | hypothetical protein (NCBI) | compare |
| b1095 | fabF | -1.1 | -5.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0149 | mrcB | -1.1 | -7.0 | penicillin-binding protein 1b (NCBI) | compare |
| b1126 | potA | -1.1 | -6.2 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1613 | manA | -1.1 | -2.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3930 | menA | -1.1 | -9.4 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3261 | fis | -1.1 | -1.2 | DNA-binding protein Fis (NCBI) | compare |
| b4545 | ypdJ | -1.1 | -1.2 | no description | compare |
| b2576 | srmB | -1.1 | -3.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b0783 | moaC | -1.1 | -4.1 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b3289 | rsmB | -1.1 | -7.9 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b4202 | rpsR | -1.0 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b0999 | cbpM | -1.0 | -3.8 | modulator of CbpA co-chaperone (NCBI) | compare |
| b1175 | minD | -1.0 | -3.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1235 | rssB | -1.0 | -3.9 | response regulator of RpoS (NCBI) | compare |
| b0781 | moaA | -1.0 | -5.6 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b0826 | moeB | -1.0 | -4.7 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b0752 | zitB | -1.0 | -5.2 | zinc transporter ZitB (NCBI) | compare |
| b0053 | surA | -1.0 | -2.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1304 | pspA | -1.0 | -3.4 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3932 | hslV | -1.0 | -6.5 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b0033 | carB | -1.0 | -3.4 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b3247 | cafA | -1.0 | -6.4 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b4246 | pyrL | -1.0 | -1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b0407 | yajC | -1.0 | -2.5 | preprotein translocase subunit YajC (NCBI) | compare |
| b0785 | moaE | -1.0 | -5.8 | molybdopterin synthase, large subunit (NCBI) | compare |
| b2809 | b2809 | -1.0 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4655 | ythA | -0.9 | -1.0 | expressed protein (RefSeq) | compare |
| b0438 | clpX | -0.9 | -2.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2168 | fruK | -0.9 | -0.8 | 1-phosphofructokinase (NCBI) | compare |
| b3494 | yhiO | -0.9 | -5.7 | universal stress protein UspB (NCBI) | compare |
| b2683 | ygaH | -0.9 | -2.5 | predicted inner membrane protein (NCBI) | compare |
| b0784 | moaD | -0.9 | -2.3 | molybdopterin synthase, small subunit (NCBI) | compare |
| b0143 | pcnB | -0.9 | -3.2 | poly(A) polymerase I (VIMSS) | compare |
| b4243 | yjgF | -0.9 | -4.1 | orf, hypothetical protein (VIMSS) | compare |
| b3404 | envZ | -0.9 | -6.0 | osmolarity sensor protein (NCBI) | compare |
| b1123 | potD | -0.9 | -5.2 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b1124 | potC | -0.9 | -4.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3784 | rfe | -0.9 | -5.7 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3281 | aroE | -0.9 | -6.5 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0912 | ihfB | -0.9 | -0.6 | integration host factor subunit beta (NCBI) | compare |
| b3857 | mobA | -0.9 | -5.2 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b1084 | rne | -0.9 | -2.7 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2175 | spr | -0.9 | -1.6 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3912 | cpxR | -0.9 | -5.5 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b3673 | emrD | -0.9 | -6.8 | 2-module integral membrane pump; multidrug resistance (VIMSS) | compare |
| b2516 | yfgA | -0.9 | -4.2 | hypothetical protein (NCBI) | compare |
| b1107 | nagZ | -0.9 | -3.8 | beta-hexosaminidase (NCBI) | compare |
| b3642 | pyrE | -0.9 | -1.7 | orotate phosphoribosyltransferase (NCBI) | compare |
| b4533 | ynfO | -0.8 | -1.7 | Qin prophage; predicted protein (NCBI) | compare |
| b3204 | ptsN | -0.8 | -3.8 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3825 | pldB | -0.8 | -7.3 | lysophospholipase L(2) (NCBI) | compare |
| b1871 | yecP | -0.8 | -3.6 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b0763 | modA | -0.8 | -3.6 | molybdate transporter subunit (NCBI) | compare |
| b3601 | mtlR | -0.8 | -5.1 | DNA-binding repressor (NCBI) | compare |
| b0080 | fruR | -0.8 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2493 | yfgO | -0.8 | -5.9 | predicted inner membrane protein (NCBI) | compare |
| b2935 | tktA | -0.8 | -1.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4390 | nadR | -0.8 | -5.7 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b0729 | sucD | -0.8 | -1.9 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1831 | proQ | -0.8 | -3.4 | putative solute/DNA competence effector (NCBI) | compare |
| b3728 | pstS | -0.8 | -2.6 | phosphate transporter subunit (NCBI) | compare |
| b1160 | elbA | -0.8 | -0.7 | hypothetical protein (NCBI) | compare |
| b3726 | pstA | -0.8 | -3.8 | phosphate transporter subunit (NCBI) | compare |
| b3409 | feoB | -0.8 | -7.3 | ferrous iron transport protein B (NCBI) | compare |
| b1659 | ydhB | -0.8 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0767 | ybhE | -0.8 | -3.2 | 6-phosphogluconolactonase (NCBI) | compare |
| b1954 | dsrA | -0.8 | -2.1 | regulatory antisense RNA (NCBI) | compare |
| b1677 | lpp | -0.8 | -1.4 | murein lipoprotein (NCBI) | compare |
| b0728 | sucC | -0.8 | -4.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4470 | yhaM | -0.8 | -4.2 | hypothetical protein (NCBI) | compare |
| b3162 | deaD | -0.8 | -3.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0055 | djlA | -0.8 | -5.2 | Dna-J like membrane chaperone protein (NCBI) | compare |
| b4180 | rlmB | -0.8 | -3.9 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b1693 | aroD | -0.8 | -3.8 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0178 | hlpA | -0.8 | -2.2 | periplasmic chaperone (NCBI) | compare |
| b4373 | rimI | -0.7 | -1.9 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1855 | lpxM | -0.7 | -3.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3055 | htrG | -0.7 | -4.6 | predicted signal transduction protein (SH3 domain) (NCBI) | compare |
| b3479 | nikD | -0.7 | -5.5 | nickel transporter subunit (NCBI) | compare |
| b0015 | dnaJ | -0.7 | -4.3 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0827 | moeA | -0.7 | -3.9 | molybdopterin biosynthesis protein (NCBI) | compare |
| b2188 | yejM | -0.7 | -4.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3408 | feoA | -0.7 | -5.8 | ferrous iron transport protein A (NCBI) | compare |
| b3761 | trpT | -0.7 | -1.4 | tRNA-Trp (NCBI) | compare |
| b1125 | potB | -0.7 | -1.9 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3931 | hslU | -0.7 | -5.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1429 | tehA | -0.7 | -1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1085 | b1085 | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3465 | yhhF | -0.7 | -4.0 | predicted methyltransferase (NCBI) | compare |
| b0237 | pepD | -0.7 | -4.5 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b3149 | yraO | -0.7 | -4.1 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b1273 | yciN | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b0761 | modE | -0.7 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2141 | yohJ | -0.7 | -2.9 | hypothetical protein (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.3 | predicted protein (RefSeq) | compare |
| b1434 | ydcN | -0.7 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3252 | yhdA | -0.7 | -5.5 | conserved inner membrane protein (NCBI) | compare |
| b3438 | gntR | -0.7 | -3.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3476 | nikA | -0.7 | -4.6 | nickel transporter subunit (NCBI) | compare |
| b0547 | ybcN | -0.7 | -3.1 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2553 | glnB | -0.7 | -3.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b2215 | ompC | -0.6 | -0.4 | outer membrane porin protein C (NCBI) | compare |