| | gene | name | fitness | t score | description | |
|---|
| b3418 | malT | +6.6 | 54.1 | transcriptional regulator MalT (NCBI) | compare |
| b4036 | lamB | +6.5 | 43.3 | maltoporin precursor (NCBI) | compare |
| b1620 | malI | +5.1 | 9.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3620 | rfaF | +3.4 | 19.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4313 | fimE | +3.2 | 18.7 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b3052 | rfaE | +2.5 | 15.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3619 | rfaD | +2.4 | 12.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3649 | rpoZ | +2.3 | 3.0 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4035 | malK | +2.2 | 3.3 | fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein (NCBI) | compare |
| b2285 | nuoE | +2.1 | 3.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3621 | rfaC | +2.0 | 12.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0222 | lpcA | +1.9 | 9.3 | phosphoheptose isomerase (NCBI) | compare |
| b2282 | nuoH | +1.9 | 8.5 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3229 | sspA | +1.9 | 4.8 | stringent starvation protein A (NCBI) | compare |
| b3398 | yrfF | +1.8 | 7.0 | predicted inner membrane protein (NCBI) | compare |
| b2280 | nuoJ | +1.8 | 7.1 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2287 | nuoB | +1.8 | 5.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2278 | nuoL | +1.8 | 12.6 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1936 | intG | +1.8 | 2.3 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2277 | nuoM | +1.8 | 8.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2279 | nuoK | +1.7 | 3.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2286 | nuoC | +1.7 | 8.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2283 | nuoG | +1.7 | 11.1 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3405 | ompR | +1.7 | 8.7 | osmolarity response regulator (NCBI) | compare |
| b2284 | nuoF | +1.6 | 7.5 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1236 | galU | +1.6 | 8.8 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1607 | ydgC | +1.6 | 1.7 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1257 | yciE | +1.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b0726 | sucA | +1.6 | 7.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2281 | nuoI | +1.5 | 6.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1205 | ychH | +1.4 | 4.1 | predicted inner membrane protein (NCBI) | compare |
| b1085 | b1085 | +1.4 | 3.9 | orf, hypothetical protein (VIMSS) | compare |
| b1160 | elbA | +1.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b3375 | yhfR | +1.3 | 8.7 | putative transcriptional regulator (VIMSS) | compare |
| b4701 | sokX | +1.3 | 1.1 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1823 | cspC | +1.3 | 2.6 | stress protein, member of the CspA-family (NCBI) | compare |
| b3082 | ygjM | +1.3 | 3.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4535 | yniD | +1.3 | 1.6 | predicted protein (RefSeq) | compare |
| b3631 | rfaG | +1.3 | 11.1 | glucosyltransferase I (NCBI) | compare |
| b2288 | nuoA | +1.3 | 3.0 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2276 | nuoN | +1.3 | 6.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2531 | iscR | +1.2 | 2.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3806 | cyaA | +1.2 | 6.6 | adenylate cyclase (NCBI) | compare |
| b1595 | ynfL | +1.2 | 2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3842 | rfaH | +1.2 | 7.8 | transcriptional activator RfaH (NCBI) | compare |
| b1594 | dgsA | +1.2 | 4.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2114 | metG | +1.2 | 2.1 | methionyl-tRNA synthetase (NCBI) | compare |
| b1831 | proQ | +1.2 | 3.7 | putative solute/DNA competence effector (NCBI) | compare |
| b1752 | ydjZ | +1.2 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b1476 | fdnI | +1.1 | 1.1 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1007 | b1007 | +1.1 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b4239 | treC | +1.1 | 2.7 | trehalose-6-P hydrolase (NCBI) | compare |
| b1548 | nohA | +1.1 | 1.6 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b3630 | rfaP | +1.0 | 8.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2540 | hcaC | +1.0 | 2.4 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b4345 | mcrC | +1.0 | 1.3 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b0688 | pgm | +1.0 | 4.6 | phosphoglucomutase (NCBI) | compare |
| b4194 | ulaB | +1.0 | 2.6 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b0200 | gmhB | +1.0 | 2.3 | hypothetical protein (NCBI) | compare |
| b1132 | hflD | +0.9 | 4.0 | hypothetical protein (NCBI) | compare |
| b3290 | trkA | +0.9 | 2.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1531 | marA | +0.9 | 2.5 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1842 | holE | +0.9 | 1.5 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0097 | yacA | +0.9 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4240 | treB | +0.9 | 6.1 | fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) | compare |
| b4630 | ykgP | +0.9 | 2.5 | no description | compare |
| b2017 | yefM | +0.9 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1950 | fliR | +0.9 | 2.8 | flagellar biosynthesis protein R (NCBI) | compare |
| b0990 | cspG | +0.8 | 0.9 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2808 | gcvA | +0.8 | 3.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4642 | yoeD | +0.8 | 2.6 | no description | compare |
| b1332 | ynaJ | +0.8 | 0.4 | predicted inner membrane protein (NCBI) | compare |
| b1382 | ynbE | +0.8 | 1.3 | predicted lipoprotein (NCBI) | compare |
| b1573 | ydfC | +0.8 | 0.9 | Qin prophage; predicted protein (RefSeq) | compare |
| b1150 | ymfR | +0.8 | 0.7 | e14 prophage; predicted protein (NCBI) | compare |
| b1819 | manZ | +0.8 | 3.1 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b4546 | ypeB | +0.8 | 1.1 | hypothetical protein (NCBI) | compare |
| b3601 | mtlR | +0.8 | 5.3 | DNA-binding repressor (NCBI) | compare |
| b1931 | yedK | +0.8 | 3.7 | hypothetical protein (NCBI) | compare |
| b2637 | yfjT | +0.8 | 1.7 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1677 | lpp | +0.8 | 1.2 | murein lipoprotein (NCBI) | compare |
| b1235 | rssB | +0.8 | 4.7 | response regulator of RpoS (NCBI) | compare |
| b4012 | yjaB | +0.7 | 2.1 | predicted acetyltransferase (NCBI) | compare |
| b3755 | yieP | +0.7 | 3.6 | predicted transcriptional regulator (NCBI) | compare |
| b0730 | mngR | +0.7 | 1.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1233 | ychJ | +0.7 | 3.8 | hypothetical protein (NCBI) | compare |
| b2111 | yehD | +0.7 | 2.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1837 | yebW | +0.7 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0310 | ykgH | +0.7 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b1305 | pspB | +0.7 | 2.6 | phage shock protein B (NCBI) | compare |
| b2672 | ygaM | +0.7 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b4472 | yhdP | +0.7 | 6.5 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b4653 | yicT | +0.7 | 1.7 | no description | compare |
| b4066 | yjcF | +0.7 | 0.9 | hypothetical protein (NCBI) | compare |
| b1709 | btuD | +0.7 | 0.6 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2735 | ygbI | +0.7 | 2.5 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2456 | cchB | +0.7 | 3.1 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b0303 | ykgI | +0.7 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0080 | fruR | +0.7 | 4.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4533 | ynfO | +0.7 | 2.1 | Qin prophage; predicted protein (NCBI) | compare |
| b3867 | hemN | +0.7 | 6.2 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b0279 | yagM | +0.7 | 0.6 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b4045 | yjbJ | +0.7 | 1.3 | predicted stress response protein (NCBI) | compare |
| b3194 | yrbE | +0.7 | 4.1 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1486 | ddpB | +0.7 | 2.1 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b2262 | menB | +0.7 | 2.3 | naphthoate synthase (NCBI) | compare |
| b1877 | yecT | +0.7 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4032 | malG | +0.7 | 4.4 | maltose transporter subunit (NCBI) | compare |
| b1361 | ydaW | +0.7 | 0.4 | orf, hypothetical protein (VIMSS) | compare |
| b1185 | dsbB | +0.7 | 2.3 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2754 | ygbF | +0.7 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1196 | ycgY | +0.7 | 1.8 | hypothetical protein (NCBI) | compare |
| b3341 | rpsG | +0.7 | 0.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b0242 | proB | +0.7 | 3.3 | gamma-glutamyl kinase (NCBI) | compare |
| b1412 | azoR | +0.7 | 1.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b4679 | yohP | +0.7 | 2.4 | expressed protein (RefSeq) | compare |
| b4151 | frdD | +0.6 | 2.5 | fumarate reductase subunit D (NCBI) | compare |
| b2969 | yghE | +0.6 | 1.6 | predicted secretion pathway protein, L-type protein (pseudogene) (RefSeq) | compare |
| b2457 | cchA | +0.6 | 2.8 | detox protein (VIMSS) | compare |
| b1344 | ydaO | +0.6 | 1.9 | predicted C32 tRNA thiolase (NCBI) | compare |
| b1339 | abgR | +0.6 | 2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2741 | rpoS | +0.6 | 2.4 | RNA polymerase sigma factor (NCBI) | compare |
| b0623 | cspE | +0.6 | 1.3 | cold shock protein E (NCBI) | compare |
| b1591 | b1591 | +0.6 | 1.2 | putative oxidoreductase component (VIMSS) | compare |
| b1278 | pgpB | +0.6 | 1.7 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b4694 | yagP | +0.6 | 2.3 | no description | compare |
| b4480 | hdfR | +0.6 | 3.3 | transcriptional regulator HdfR (NCBI) | compare |
| b1588 | ynfF | +0.6 | 2.2 | oxidoreductase subunit (RefSeq) | compare |
| b1040 | csgD | +0.6 | 1.0 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1325 | ycjG | +0.6 | 1.8 | putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) | compare |
| b1566 | flxA | +0.6 | 2.4 | Qin prophage; predicted protein (NCBI) | compare |
| b4532 | yncN | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2506 | yfgI | +0.6 | 1.4 | hypothetical protein (NCBI) | compare |
| b2455 | eutE | +0.6 | 2.5 | predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI) | compare |
| b2264 | menD | +0.6 | 3.4 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b2652 | ileY | +0.6 | 0.6 | tRNA-Ile (NCBI) | compare |
| b2044 | wcaL | +0.6 | 1.8 | predicted glycosyl transferase (NCBI) | compare |
| b4093 | phnO | +0.6 | 1.9 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2009 | sbmC | +0.6 | 2.1 | DNA gyrase inhibitor (NCBI) | compare |
| b0217 | yafT | +0.6 | 2.9 | predicted aminopeptidase (NCBI) | compare |
| b4104 | phnE | +0.6 | 2.0 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b1668 | ydhS | +0.6 | 2.6 | conserved protein with FAD/NAD(P)-binding domain (NCBI) | compare |
| b2004 | yeeU | +0.6 | 1.0 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b4613 | dinQ | +0.6 | 1.0 | Damage inducible, function unknown (RefSeq) | compare |
| b3163 | nlpI | +0.6 | 2.5 | hypothetical protein (NCBI) | compare |
| b4603 | rseX | +0.6 | 0.4 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4529 | ydbJ | +0.6 | 0.6 | hypothetical protein (NCBI) | compare |
| b4177 | purA | +0.6 | 1.0 | adenylosuccinate synthetase (NCBI) | compare |
| b3504 | yhiS | +0.6 | 0.3 | hypothetical protein (RefSeq) | compare |
| b1523 | yneG | +0.6 | 0.8 | hypothetical protein (NCBI) | compare |
| b2051 | wcaH | +0.6 | 1.2 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b0720 | gltA | +0.6 | 3.4 | citrate synthase (NCBI) | compare |
| b0792 | ybhR | +0.6 | 1.7 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0798 | ybiA | +0.6 | 1.1 | hypothetical protein (NCBI) | compare |
| b4660 | yhiL | +0.6 | 0.3 | no description | compare |
| b4651 | yibW | +0.6 | 0.3 | no description | compare |
| b3442 | yhhZ | +0.6 | 0.3 | hypothetical protein (NCBI) | compare |
| b0768 | ybhD | +0.6 | 1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3728 | pstS | +0.6 | 1.9 | phosphate transporter subunit (NCBI) | compare |
| b4702 | mgtL | +0.6 | 1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b4655 | ythA | +0.5 | 0.9 | expressed protein (RefSeq) | compare |
| b0246 | yafW | +0.5 | 1.8 | CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system (NCBI) | compare |
| b0234 | yafP | +0.5 | 1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1613 | manA | +0.5 | 1.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3075 | ebgR | +0.5 | 2.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2266 | elaB | +0.5 | 1.2 | hypothetical protein (NCBI) | compare |
| b2977 | glcG | +0.5 | 2.6 | hypothetical protein (NCBI) | compare |
| b1315 | ycjS | +0.5 | 2.1 | predicted oxidoreductase, NADH-binding (NCBI) | compare |
| b2023 | hisH | +0.5 | 2.2 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b3121 | yhaC | +0.5 | 0.3 | hypothetical protein (NCBI) | compare |
| b4458 | oxyS | +0.5 | 0.9 | global regulatory RNA (NCBI) | compare |
| b0209 | yafD | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b4063 | soxR | +0.5 | 2.0 | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) | compare |
| b0530 | sfmA | +0.5 | 1.9 | putative fimbrial-like protein (VIMSS) | compare |
| b3027 | ygiZ | +0.5 | 0.3 | conserved inner membrane protein (NCBI) | compare |
| b1183 | umuD | +0.5 | 1.0 | DNA polymerase V, subunit D (NCBI) | compare |
| b2728 | hypC | +0.5 | 2.0 | protein required for maturation of hydrogenases 1 and 3 (NCBI) | compare |
| b1830 | prc | +0.5 | 2.6 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1971 | yedY | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b3021 | ygiT | +0.5 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3624 | rfaZ | +0.5 | 1.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3622 | rfaL | +0.5 | 1.9 | O-antigen ligase (NCBI) | compare |
| b2778 | ygcG | +0.5 | 2.6 | orf, hypothetical protein (VIMSS) | compare |
| b4370 | leuQ | +0.5 | 1.5 | tRNA-Leu (NCBI) | compare |
| b4443 | gcvB | +0.5 | 0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b1955 | yedP | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b2853 | ygeI | +0.5 | 0.2 | hypothetical protein (NCBI) | compare |
| b3676 | yidH | +0.5 | 0.9 | conserved inner membrane protein (NCBI) | compare |
| b4191 | ulaR | +0.5 | 1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3811 | xerC | +0.5 | 1.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2635 | ypjK | +0.5 | 1.5 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0957 | ompA | +0.5 | 1.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2659 | b2659 | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2300 | yfcE | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1263 | trpD | +0.5 | 0.8 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b3725 | pstB | +0.5 | 0.4 | phosphate transporter subunit (NCBI) | compare |
| b2742 | nlpD | +0.5 | 3.0 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4294 | insA-7 | +0.5 | 1.3 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b2911 | ssrS | +0.5 | 0.8 | 6S regulatory RNA (NCBI) | compare |
| b0781 | moaA | +0.5 | 2.7 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |