| | gene | name | fitness | t score | description | |
|---|
| b0441 | ppiD | -5.6 | -10.8 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b3466 | yhhL | -5.6 | -3.9 | conserved inner membrane protein (NCBI) | compare |
| b2101 | yegW | -5.1 | -4.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3912 | cpxR | -5.1 | -9.2 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b3038 | ygiC | -5.1 | -10.7 | predicted enzyme (NCBI) | compare |
| b4175 | hflC | -4.6 | -5.5 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1104 | ycfL | -4.6 | -1.7 | hypothetical protein (NCBI) | compare |
| b4174 | hflK | -4.5 | -4.4 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3611 | yibN | -4.5 | -3.1 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b0970 | yccA | -4.4 | -4.1 | inner membrane protein (NCBI) | compare |
| b2952 | yggT | -4.4 | -6.2 | predicted inner membrane protein (NCBI) | compare |
| b3094 | exuR | -4.4 | -3.0 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b3465 | yhhF | -4.2 | -4.1 | predicted methyltransferase (NCBI) | compare |
| b3932 | hslV | -4.2 | -11.5 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1255 | yciC | -4.2 | -4.5 | hypothetical protein (NCBI) | compare |
| b3931 | hslU | -4.1 | -13.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0462 | acrB | -4.1 | -15.6 | multidrug efflux system protein (NCBI) | compare |
| b3226 | yhcK | -4.1 | -2.8 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b0418 | pgpA | -4.0 | -4.8 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b4241 | treR | -3.8 | -11.4 | trehalose repressor (NCBI) | compare |
| b0463 | acrA | -3.7 | -9.7 | multidrug efflux system (NCBI) | compare |
| b1422 | ydcI | -3.7 | -5.0 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b3037 | ygiB | -3.6 | -4.4 | conserved outer membrane protein (RefSeq) | compare |
| b1175 | minD | -3.6 | -2.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2844 | yqeF | -3.5 | -8.7 | putative acyltransferase (VIMSS) | compare |
| b2141 | yohJ | -3.4 | -2.4 | hypothetical protein (NCBI) | compare |
| b2741 | rpoS | -3.4 | -5.8 | RNA polymerase sigma factor (NCBI) | compare |
| b0113 | pdhR | -3.4 | -4.0 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b2314 | dedD | -3.3 | -3.7 | putative lipoprotein (VIMSS) | compare |
| b4232 | fbp | -3.2 | -2.2 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b3423 | glpR | -3.2 | -7.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2796 | sdaC | -3.1 | -9.1 | predicted serine transporter (NCBI) | compare |
| b1882 | cheY | -2.9 | -0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2501 | ppk | -2.9 | -2.0 | polyphosphate kinase (NCBI) | compare |
| b0990 | cspG | -2.8 | -1.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1620 | malI | -2.8 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0142 | folK | -2.8 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0908 | aroA | -2.7 | -5.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3891 | fdhE | -2.7 | -6.5 | formate dehydrogenase accessory protein FdhE (NCBI) | compare |
| b2939 | yqgB | -2.7 | -1.1 | predicted protein (RefSeq) | compare |
| b4557 | yidD | -2.7 | -3.2 | hypothetical protein (NCBI) | compare |
| b1480 | sra | -2.6 | -1.3 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b4603 | rseX | -2.6 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b0436 | tig | -2.6 | -6.4 | trigger factor (NCBI) | compare |
| b3884 | yihW | -2.5 | -5.0 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b1482 | osmC | -2.5 | -1.8 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3198 | kdsC | -2.5 | -1.9 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2707 | srlR | -2.5 | -3.8 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b0791 | ybhQ | -2.5 | -3.4 | predicted inner membrane protein (NCBI) | compare |
| b1304 | pspA | -2.5 | -2.3 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b0676 | nagC | -2.5 | -4.3 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b4025 | pgi | -2.5 | -7.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3497 | yhiQ | -2.5 | -7.1 | predicted SAM-dependent methyltransferase (NCBI) | compare |
| b0706 | ybfD | -2.4 | -1.7 | hypothetical protein (NCBI) | compare |
| b1493 | gadB | -2.4 | -0.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b3443 | yrhA | -2.4 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2329 | aroC | -2.3 | -1.6 | chorismate synthase (NCBI) | compare |
| b3601 | mtlR | -2.3 | -5.6 | DNA-binding repressor (NCBI) | compare |
| b2037 | rfbX | -2.3 | -6.3 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b0730 | mngR | -2.3 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4655 | ythA | -2.2 | -1.4 | expressed protein (RefSeq) | compare |
| b3849 | trkH | -2.2 | -1.5 | potassium transporter (NCBI) | compare |
| b0548 | ninE | -2.2 | -3.7 | DLP12 prophage; conserved protein (NCBI) | compare |
| b4699 | fnrS | -2.2 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0407 | yajC | -2.2 | -1.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b3146 | yraL | -2.2 | -5.4 | predicted methyltransferase (NCBI) | compare |
| b3790 | rffC | -2.2 | -1.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1231 | tyrT | -2.1 | -0.6 | tRNA-Tyr (NCBI) | compare |
| b2295 | yfbV | -2.1 | -3.0 | hypothetical protein (NCBI) | compare |
| b1550 | b1550 | -2.1 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3259 | prmA | -2.1 | -3.4 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b3752 | rbsK | -2.1 | -8.7 | ribokinase (NCBI) | compare |
| b1150 | ymfR | -2.1 | -0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b1961 | dcm | -2.1 | -1.1 | DNA cytosine methylase (NCBI) | compare |
| b2947 | gshB | -2.1 | -2.4 | glutathione synthetase (NCBI) | compare |
| b1134 | ymfB | -2.0 | -1.6 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b2156 | lysP | -2.0 | -7.6 | lysine transporter (NCBI) | compare |
| b2175 | spr | -2.0 | -2.6 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b4585 | sroB | -2.0 | -1.1 | Novel sRNA, function unknown (RefSeq) | compare |
| b0928 | aspC | -2.0 | -3.2 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3205 | yhbJ | -2.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b1323 | tyrR | -2.0 | -2.4 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b2183 | rsuA | -2.0 | -2.2 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b2313 | cvpA | -1.9 | -3.1 | membrane protein required for colicin V production (NCBI) | compare |
| b2331 | yfcN | -1.9 | -4.9 | hypothetical protein (NCBI) | compare |
| b3404 | envZ | -1.9 | -9.0 | osmolarity sensor protein (NCBI) | compare |
| b0145 | dksA | -1.9 | -1.9 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3403 | pck | -1.9 | -7.8 | phosphoenolpyruvate carboxykinase (NCBI) | compare |
| b1557 | cspB | -1.9 | -1.4 | Qin prophage; cold shock protein (NCBI) | compare |
| b4532 | yncN | -1.9 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1147 | ymfL | -1.9 | -2.1 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3289 | rsmB | -1.9 | -8.7 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b2964 | nupG | -1.9 | -7.9 | transport of nucleosides, permease protein (VIMSS) | compare |
| b1753 | ynjA | -1.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b1954 | dsrA | -1.8 | -1.8 | regulatory antisense RNA (NCBI) | compare |
| b2340 | sixA | -1.8 | -2.0 | phosphohistidine phosphatase (NCBI) | compare |
| b1563 | relE | -1.8 | -1.2 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b3032 | cpdA | -1.8 | -5.7 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b3424 | glpG | -1.8 | -6.3 | predicted intramembrane serine protease (NCBI) | compare |
| b3617 | kbl | -1.8 | -3.7 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2263 | yfbB | -1.7 | -1.5 | predicted peptidase (NCBI) | compare |
| b0097 | yacA | -1.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3383 | yhfZ | -1.7 | -4.0 | hypothetical protein (NCBI) | compare |
| b2513 | yfgM | -1.7 | -2.8 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -1.7 | -0.5 | tRNA-Tyr (NCBI) | compare |
| b2362 | yfdS | -1.7 | -2.7 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2014 | yeeF | -1.7 | -4.1 | putative amino acid/amine transport protein (VIMSS) | compare |
| b0932 | pepN | -1.7 | -6.1 | aminopeptidase N (NCBI) | compare |
| b1038 | csgF | -1.7 | -2.3 | predicted transport protein (NCBI) | compare |
| b2261 | menC | -1.7 | -3.9 | O-succinylbenzoate synthase (NCBI) | compare |
| b0240 | crl | -1.7 | -5.4 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1179 | ycgL | -1.6 | -1.6 | conserved protein (NCBI) | compare |
| b2260 | menE | -1.6 | -6.9 | O-succinylbenzoic acid--CoA ligase (NCBI) | compare |
| b4647 | mokA | -1.6 | -0.7 | no description | compare |
| b0782 | moaB | -1.6 | -1.4 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b4349 | hsdM | -1.6 | -5.7 | DNA methylase M (NCBI) | compare |
| b3753 | rbsR | -1.6 | -7.6 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b0218 | yafU | -1.6 | -2.4 | predicted inner membrane protein (RefSeq) | compare |
| b2264 | menD | -1.6 | -4.4 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1090 | plsX | -1.6 | -2.2 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b1642 | slyA | -1.6 | -1.1 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0920 | ycbC | -1.6 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b1842 | holE | -1.5 | -1.1 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0846 | ybjK | -1.5 | -4.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4390 | nadR | -1.5 | -6.2 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b4217 | ytfK | -1.5 | -3.6 | orf, hypothetical protein (VIMSS) | compare |
| b4692 | oweE | -1.5 | -1.8 | no description | compare |
| b0798 | ybiA | -1.5 | -1.4 | hypothetical protein (NCBI) | compare |
| b2114 | metG | -1.5 | -1.3 | methionyl-tRNA synthetase (NCBI) | compare |
| b4393 | trpR | -1.5 | -3.6 | Trp operon repressor (NCBI) | compare |
| b3726 | pstA | -1.5 | -1.0 | phosphate transporter subunit (NCBI) | compare |
| b2258 | b2258 | -1.5 | -0.7 | putative transport/receptor protein (VIMSS) | compare |
| b3238 | yhcN | -1.5 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0937 | ssuE | -1.4 | -1.7 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b1408 | b1408 | -1.4 | -2.8 | probable enzyme (VIMSS) | compare |
| b0976 | hyaE | -1.4 | -2.0 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b0661 | miaB | -1.4 | -5.1 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b2859 | ygeO | -1.4 | -1.5 | hypothetical protein (RefSeq) | compare |
| b0728 | sucC | -1.4 | -2.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1507 | hipA | -1.4 | -3.1 | regulator with hipB (NCBI) | compare |
| b2783 | chpR | -1.4 | -1.3 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b2393 | nupC | -1.4 | -3.5 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b1070 | flgN | -1.4 | -0.7 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1125 | potB | -1.4 | -1.7 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1272 | sohB | -1.4 | -3.5 | predicted inner membrane peptidase (NCBI) | compare |
| b0707 | ybgA | -1.4 | -2.7 | hypothetical protein (NCBI) | compare |
| b2262 | menB | -1.4 | -1.5 | naphthoate synthase (NCBI) | compare |
| b4519 | icdC | -1.3 | -2.1 | no description | compare |
| b2209 | eco | -1.3 | -1.1 | ecotin precursor (NCBI) | compare |
| b1249 | cls | -1.3 | -3.5 | cardiolipin synthetase (NCBI) | compare |
| b1095 | fabF | -1.3 | -2.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1324 | tpx | -1.3 | -1.9 | thiol peroxidase (NCBI) | compare |
| b1871 | yecP | -1.3 | -2.0 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b1618 | uidR | -1.3 | -2.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2510 | b2510 | -1.3 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1670 | ydhU | -1.3 | -3.2 | predicted cytochrome (NCBI) | compare |
| b1233 | ychJ | -1.3 | -2.2 | hypothetical protein (NCBI) | compare |
| b4631 | ykgQ | -1.3 | -0.7 | no description | compare |
| b1907 | tyrP | -1.3 | -2.6 | tyrosine transporter (NCBI) | compare |
| b4431 | rprA | -1.3 | -1.2 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b2618 | b2618 | -1.3 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2004 | yeeU | -1.3 | -2.2 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b3098 | yqjD | -1.3 | -2.0 | hypothetical protein (NCBI) | compare |
| b2272 | yfbM | -1.3 | -2.1 | hypothetical protein (NCBI) | compare |
| b0502 | ylbG | -1.3 | -2.0 | no description | compare |
| b1157 | stfE | -1.3 | -4.3 | no description | compare |
| b1630 | rsxD | -1.3 | -2.5 | electron transport complex protein RnfD (NCBI) | compare |
| b3933 | ftsN | -1.3 | -4.6 | essential cell division protein (NCBI) | compare |
| b1728 | ydjM | -1.3 | -1.6 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b0881 | clpS | -1.3 | -0.8 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1594 | dgsA | -1.3 | -1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1245 | oppC | -1.3 | -2.8 | oligopeptide transporter subunit (NCBI) | compare |
| b2910 | zapA | -1.3 | -2.7 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b2221 | atoD | -1.2 | -2.0 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b1176 | minC | -1.2 | -0.6 | septum formation inhibitor (NCBI) | compare |
| b0729 | sucD | -1.2 | -0.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1187 | fadR | -1.2 | -2.0 | fatty acid metabolism regulator (NCBI) | compare |
| b2039 | rfbA | -1.2 | -6.3 | glucose-1-phosphate thymidylyltransferase (NCBI) | compare |
| b2971 | yghG | -1.2 | -4.2 | hypothetical protein (NCBI) | compare |
| b3930 | menA | -1.2 | -6.1 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b4235 | pmbA | -1.2 | -4.7 | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) | compare |
| b3263 | yhdU | -1.2 | -3.4 | predicted membrane protein (NCBI) | compare |
| b1338 | ydaJ | -1.2 | -2.6 | putative aminohydrolase (EC 3.5.1.14) (VIMSS) | compare |
| b0585 | fes | -1.2 | -1.6 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b2424 | cysU | -1.2 | -1.4 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3438 | gntR | -1.2 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3017 | sufI | -1.2 | -5.5 | repressor protein for FtsI (NCBI) | compare |
| b0605 | ahpC | -1.2 | -1.8 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1114 | mfd | -1.2 | -3.2 | transcription-repair coupling factor (NCBI) | compare |
| b0998 | torD | -1.2 | -0.6 | chaperone protein TorD (NCBI) | compare |
| b0946 | ycbW | -1.2 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3673 | emrD | -1.1 | -4.6 | 2-module integral membrane pump; multidrug resistance (VIMSS) | compare |
| b0564 | appY | -1.1 | -0.5 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0767 | ybhE | -1.1 | -1.3 | 6-phosphogluconolactonase (NCBI) | compare |
| b1250 | kch | -1.1 | -4.0 | voltage-gated potassium channel (NCBI) | compare |
| b2435 | amiA | -1.1 | -2.1 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0632 | dacA | -1.1 | -3.5 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0866 | ybjQ | -1.1 | -0.6 | hypothetical protein (NCBI) | compare |
| b2593 | yfiH | -1.1 | -4.7 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | -1.1 | -0.2 | orf, hypothetical protein (VIMSS) | compare |