| | gene | name | fitness | t score | description | |
|---|
| b3912 | cpxR | -4.9 | -7.5 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b1382 | ynbE | -4.6 | -1.7 | predicted lipoprotein (NCBI) | compare |
| b4175 | hflC | -4.5 | -3.1 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1823 | cspC | -4.3 | -3.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b3038 | ygiC | -4.2 | -10.5 | predicted enzyme (NCBI) | compare |
| b4174 | hflK | -4.0 | -4.7 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3094 | exuR | -4.0 | -2.7 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b1476 | fdnI | -3.8 | -1.4 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3465 | yhhF | -3.7 | -3.6 | predicted methyltransferase (NCBI) | compare |
| b3466 | yhhL | -3.6 | -5.5 | conserved inner membrane protein (NCBI) | compare |
| b0441 | ppiD | -3.6 | -12.5 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b1628 | rsxB | -3.6 | -2.9 | electron transport complex protein RnfB (NCBI) | compare |
| b3226 | yhcK | -3.6 | -2.5 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b0920 | ycbC | -3.4 | -3.1 | conserved inner membrane protein (NCBI) | compare |
| b2101 | yegW | -3.3 | -5.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2904 | gcvH | -3.3 | -2.2 | glycine cleavage system protein H (NCBI) | compare |
| b2707 | srlR | -3.2 | -6.9 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b3977 | tyrU | -3.2 | -1.2 | tRNA-Tyr (NCBI) | compare |
| b1961 | dcm | -3.2 | -1.6 | DNA cytosine methylase (NCBI) | compare |
| b0912 | ihfB | -3.2 | -2.2 | integration host factor subunit beta (NCBI) | compare |
| b1255 | yciC | -3.1 | -4.6 | hypothetical protein (NCBI) | compare |
| b2175 | spr | -3.1 | -3.0 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0836 | yliH | -3.1 | -3.1 | hypothetical protein (NCBI) | compare |
| b0970 | yccA | -3.1 | -3.3 | inner membrane protein (NCBI) | compare |
| b3037 | ygiB | -3.0 | -6.0 | conserved outer membrane protein (RefSeq) | compare |
| b4241 | treR | -3.0 | -11.0 | trehalose repressor (NCBI) | compare |
| b0019 | nhaA | -2.9 | -6.3 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b2314 | dedD | -2.9 | -3.8 | putative lipoprotein (VIMSS) | compare |
| b0418 | pgpA | -2.9 | -4.4 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b2952 | yggT | -2.9 | -4.6 | predicted inner membrane protein (NCBI) | compare |
| b1422 | ydcI | -2.8 | -6.0 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b0676 | nagC | -2.8 | -5.3 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b4232 | fbp | -2.8 | -2.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b4450 | arcZ | -2.8 | -3.3 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b1217 | chaB | -2.7 | -1.7 | cation transport regulator (NCBI) | compare |
| b3611 | yibN | -2.6 | -4.7 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b0407 | yajC | -2.6 | -1.8 | preprotein translocase subunit YajC (NCBI) | compare |
| b3836 | b3836 | -2.6 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2646 | ypjF | -2.5 | -1.8 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1865 | nudB | -2.5 | -1.6 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1882 | cheY | -2.5 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3403 | pck | -2.4 | -8.5 | phosphoenolpyruvate carboxykinase (NCBI) | compare |
| b2618 | b2618 | -2.4 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b4458 | oxyS | -2.4 | -1.7 | global regulatory RNA (NCBI) | compare |
| b3753 | rbsR | -2.4 | -8.0 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b0142 | folK | -2.4 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0436 | tig | -2.4 | -3.8 | trigger factor (NCBI) | compare |
| b0881 | clpS | -2.4 | -1.4 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b3404 | envZ | -2.4 | -7.7 | osmolarity sensor protein (NCBI) | compare |
| b2501 | ppk | -2.4 | -2.8 | polyphosphate kinase (NCBI) | compare |
| b2258 | b2258 | -2.4 | -1.2 | putative transport/receptor protein (VIMSS) | compare |
| b2570 | rseC | -2.4 | -4.2 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b3932 | hslV | -2.3 | -7.9 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b3075 | ebgR | -2.3 | -3.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0946 | ycbW | -2.3 | -3.8 | orf, hypothetical protein (VIMSS) | compare |
| b1696 | ydiP | -2.2 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4025 | pgi | -2.2 | -7.1 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1677 | lpp | -2.2 | -2.0 | murein lipoprotein (NCBI) | compare |
| b3601 | mtlR | -2.2 | -4.7 | DNA-binding repressor (NCBI) | compare |
| b2682 | ygaZ | -2.2 | -3.8 | predicted transporter (NCBI) | compare |
| b3529 | yhjK | -2.2 | -10.7 | predicted diguanylate cyclase (RefSeq) | compare |
| b3423 | glpR | -2.2 | -6.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3931 | hslU | -2.1 | -9.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3443 | yrhA | -2.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1175 | minD | -2.1 | -2.0 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2329 | aroC | -2.1 | -1.4 | chorismate synthase (NCBI) | compare |
| b3790 | rffC | -2.1 | -1.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0471 | ybaB | -2.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | -2.1 | -3.1 | hypothetical protein (NCBI) | compare |
| b0730 | mngR | -2.1 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2617 | smpA | -2.1 | -1.5 | small membrane protein A (VIMSS) | compare |
| b0052 | pdxA | -2.1 | -6.0 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| b2844 | yqeF | -2.0 | -5.9 | putative acyltransferase (VIMSS) | compare |
| b1629 | rsxC | -2.0 | -5.3 | electron transport complex protein RnfC (NCBI) | compare |
| b3884 | yihW | -2.0 | -3.7 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b3752 | rbsK | -2.0 | -7.2 | ribokinase (NCBI) | compare |
| b2939 | yqgB | -2.0 | -1.4 | predicted protein (RefSeq) | compare |
| b0928 | aspC | -2.0 | -3.0 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3424 | glpG | -2.0 | -8.0 | predicted intramembrane serine protease (NCBI) | compare |
| b4592 | yccB | -1.9 | -1.7 | hypothetical protein (RefSeq) | compare |
| b4203 | rplI | -1.9 | -3.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b2236 | yfaE | -1.9 | -1.6 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b1524 | yneH | -1.9 | -1.0 | predicted glutaminase (NCBI) | compare |
| b2643 | yfjX | -1.9 | -2.8 | CP4-57 prophage; predicted antirestriction protein (NCBI) | compare |
| b1298 | ycjL | -1.9 | -3.4 | probable amidotransferase subunit (VIMSS) | compare |
| b3205 | yhbJ | -1.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b2037 | rfbX | -1.9 | -6.0 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b1591 | b1591 | -1.9 | -1.4 | putative oxidoreductase component (VIMSS) | compare |
| b3107 | yhaL | -1.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1575 | dicB | -1.8 | -1.7 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1914 | uvrY | -1.8 | -3.7 | response regulator (NCBI) | compare |
| b1104 | ycfL | -1.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b3849 | trkH | -1.8 | -2.7 | potassium transporter (NCBI) | compare |
| b2741 | rpoS | -1.7 | -2.2 | RNA polymerase sigma factor (NCBI) | compare |
| b3438 | gntR | -1.7 | -4.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2039 | rfbA | -1.7 | -8.4 | glucose-1-phosphate thymidylyltransferase (NCBI) | compare |
| b0632 | dacA | -1.7 | -5.1 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1070 | flgN | -1.7 | -1.1 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2513 | yfgM | -1.7 | -3.5 | hypothetical protein (NCBI) | compare |
| b4140 | b4140 | -1.7 | -5.5 | orf, hypothetical protein (VIMSS) | compare |
| b3157 | yhbT | -1.7 | -2.7 | predicted lipid carrier protein (NCBI) | compare |
| b2214 | yojL | -1.6 | -2.9 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b2340 | sixA | -1.6 | -1.6 | phosphohistidine phosphatase (NCBI) | compare |
| b4541 | yehK | -1.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b2725 | hycA | -1.6 | -2.8 | regulator of the transcriptional regulator FhlA (NCBI) | compare |
| b1871 | yecP | -1.6 | -2.8 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2248 | yfaX | -1.6 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0035 | caiE | -1.5 | -3.2 | possible synthesis of cofactor for carnitine racemase and dehydratase (VIMSS) | compare |
| b2058 | wcaB | -1.5 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b2376 | ypdI | -1.5 | -2.5 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b4701 | sokX | -1.5 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0097 | yacA | -1.5 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1582 | ynfA | -1.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b0145 | dksA | -1.5 | -1.7 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1567 | intK | -1.5 | -1.6 | Qin prophage; predicted protein (RefSeq) | compare |
| b3673 | emrD | -1.4 | -6.3 | 2-module integral membrane pump; multidrug resistance (VIMSS) | compare |
| b2444 | yffM | -1.4 | -1.2 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b4589 | ylcI | -1.4 | -2.2 | hypothetical protein (RefSeq) | compare |
| b0463 | acrA | -1.4 | -5.4 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -1.4 | -7.0 | multidrug efflux system protein (NCBI) | compare |
| b4570 | lomR | -1.4 | -1.3 | no description | compare |
| b1926 | fliT | -1.4 | -2.5 | predicted chaperone (NCBI) | compare |
| b2433 | b2433 | -1.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1013 | ycdC | -1.4 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2896 | ygfX | -1.4 | -3.6 | hypothetical protein (NCBI) | compare |
| b3933 | ftsN | -1.4 | -5.5 | essential cell division protein (NCBI) | compare |
| b2807 | ygdD | -1.3 | -2.0 | conserved inner membrane protein (NCBI) | compare |
| b0728 | sucC | -1.3 | -1.8 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2366 | dsdA | -1.3 | -3.5 | D-serine dehydratase (NCBI) | compare |
| b1278 | pgpB | -1.3 | -1.4 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b4522 | yciX_1 | -1.3 | -1.3 | hypothetical protein (NCBI) | compare |
| b3228 | sspB | -1.3 | -3.0 | ClpXP protease specificity-enhancing factor (NCBI) | compare |
| b3289 | rsmB | -1.3 | -5.3 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b1273 | yciN | -1.3 | -0.9 | hypothetical protein (NCBI) | compare |
| b2679 | proX | -1.3 | -2.4 | glycine betaine transporter subunit (NCBI) | compare |
| b2024 | hisA | -1.3 | -1.5 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b2945 | endA | -1.3 | -2.8 | DNA-specific endonuclease I (NCBI) | compare |
| b4698 | mgrR | -1.3 | -1.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1370 | insH-5 | -1.3 | -1.5 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b2506 | yfgI | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b2435 | amiA | -1.3 | -2.5 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b2215 | ompC | -1.3 | -3.4 | outer membrane porin protein C (NCBI) | compare |
| b2504 | yfgG | -1.3 | -0.9 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b1482 | osmC | -1.3 | -1.4 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b2362 | yfdS | -1.3 | -2.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2637 | yfjT | -1.3 | -2.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b3017 | sufI | -1.2 | -5.0 | repressor protein for FtsI (NCBI) | compare |
| b0357 | yaiN | -1.2 | -0.8 | putative alpha helix chain (VIMSS) | compare |
| b2564 | pdxJ | -1.2 | -2.1 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b0055 | djlA | -1.2 | -4.7 | Dna-J like membrane chaperone protein (NCBI) | compare |
| b1630 | rsxD | -1.2 | -2.7 | electron transport complex protein RnfD (NCBI) | compare |
| b1632 | rsxE | -1.2 | -2.8 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1627 | rsxA | -1.2 | -1.6 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b3146 | yraL | -1.2 | -3.8 | predicted methyltransferase (NCBI) | compare |
| b3375 | yhfR | -1.2 | -3.4 | putative transcriptional regulator (VIMSS) | compare |
| b0661 | miaB | -1.2 | -4.4 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b0563 | tfaX | -1.2 | -3.3 | DLP12 prophage; predicted protein (RefSeq) | compare |
| b1358 | ydaT | -1.2 | -0.9 | Rac prophage; predicted protein (NCBI) | compare |
| b2156 | lysP | -1.2 | -5.2 | lysine transporter (NCBI) | compare |
| b2635 | ypjK | -1.2 | -1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2783 | chpR | -1.2 | -1.1 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b1642 | slyA | -1.2 | -0.8 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b2593 | yfiH | -1.2 | -4.2 | hypothetical protein (NCBI) | compare |
| b3891 | fdhE | -1.2 | -5.1 | formate dehydrogenase accessory protein FdhE (NCBI) | compare |
| b1245 | oppC | -1.2 | -2.2 | oligopeptide transporter subunit (NCBI) | compare |
| b4410 | ecnA | -1.2 | -0.9 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1824 | yobF | -1.2 | -1.0 | hypothetical protein (NCBI) | compare |
| b3484 | yhhI | -1.2 | -2.1 | predicted transposase (NCBI) | compare |
| b1176 | minC | -1.2 | -0.8 | septum formation inhibitor (NCBI) | compare |
| b2624 | alpA | -1.2 | -3.6 | CP4-57 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3890 | yiiF | -1.2 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0450 | glnK | -1.2 | -1.9 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b0908 | aroA | -1.2 | -3.1 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2714 | ascG | -1.2 | -3.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4630 | ykgP | -1.2 | -1.7 | no description | compare |
| b2272 | yfbM | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b1108 | ycfP | -1.2 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0036 | caiD | -1.2 | -3.0 | crotonobetainyl CoA hydratase (RefSeq) | compare |
| b1304 | pspA | -1.1 | -1.6 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b1954 | dsrA | -1.1 | -0.9 | regulatory antisense RNA (NCBI) | compare |
| b1183 | umuD | -1.1 | -1.3 | DNA polymerase V, subunit D (NCBI) | compare |
| b3022 | b3022 | -1.1 | -4.5 | predicted cyanide hydratase (NCBI) | compare |
| b2786 | barA | -1.1 | -8.2 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | compare |
| b1993 | cobU | -1.1 | -2.2 | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI) | compare |
| b2796 | sdaC | -1.1 | -5.3 | predicted serine transporter (NCBI) | compare |
| b1021 | ycdP | -1.1 | -2.9 | predicted inner membrane protein (NCBI) | compare |
| b1878 | flhE | -1.1 | -2.2 | hypothetical protein (NCBI) | compare |
| b0866 | ybjQ | -1.1 | -0.8 | hypothetical protein (NCBI) | compare |
| b2295 | yfbV | -1.1 | -2.8 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -1.1 | -0.8 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2350 | yfdG | -1.1 | -2.9 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b2993 | hybD | -1.1 | -2.2 | predicted maturation element for hydrogenase 2 (NCBI) | compare |
| b1082 | flgK | -1.1 | -3.0 | flagellar hook-associated protein K (NCBI) | compare |
| b0034 | caiF | -1.1 | -4.8 | transcriptional regulator of cai operon (VIMSS) | compare |
| b1742 | b1742 | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0280 | yagN | -1.1 | -2.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2927 | epd | -1.1 | -3.0 | D-erythrose 4-phosphate dehydrogenase (NCBI) | compare |
| b1320 | ycjW | -1.1 | -3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3244 | tldD | -1.1 | -5.0 | predicted peptidase (NCBI) | compare |
| b0617 | citD | -1.1 | -2.3 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |