| | gene | name | fitness | t score | description | |
|---|
| b0191 | yaeJ | +7.1 | 19.7 | hypothetical protein (NCBI) | compare |
| b3961 | oxyR | +6.4 | 4.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0683 | fur | +6.2 | 3.6 | ferric uptake regulator (NCBI) | compare |
| b3398 | yrfF | +5.7 | 15.7 | predicted inner membrane protein (NCBI) | compare |
| b3842 | rfaH | +5.1 | 18.4 | transcriptional activator RfaH (NCBI) | compare |
| b0428 | cyoE | +5.0 | 21.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3806 | cyaA | +5.0 | 15.2 | adenylate cyclase (NCBI) | compare |
| b0623 | cspE | +4.9 | 11.2 | cold shock protein E (NCBI) | compare |
| b0432 | cyoA | +4.9 | 32.5 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b0429 | cyoD | +4.8 | 17.8 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b1835 | yebU | +4.7 | 31.5 | putative nucleolar proteins (VIMSS) | compare |
| b2906 | visC | +4.7 | 19.8 | hypothetical protein (NCBI) | compare |
| b0590 | fepD | +4.6 | 21.3 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0592 | fepB | +4.5 | 26.5 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3844 | fre | +4.3 | 14.9 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0588 | fepC | +4.3 | 23.5 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0431 | cyoB | +4.2 | 25.9 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3493 | pitA | +4.1 | 18.5 | phosphate transporter, low-affinity (NCBI) | compare |
| b2113 | mrp | +4.1 | 21.3 | putative ATPase (VIMSS) | compare |
| b0430 | cyoC | +4.1 | 16.2 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3626 | rfaJ | +4.1 | 15.2 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1286 | rnb | +4.1 | 6.2 | exoribonuclease II (NCBI) | compare |
| b0589 | fepG | +4.0 | 21.3 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0014 | dnaK | +4.0 | 13.2 | molecular chaperone DnaK (NCBI) | compare |
| b1235 | rssB | +3.9 | 17.8 | response regulator of RpoS (NCBI) | compare |
| b4201 | priB | +3.9 | 10.8 | primosomal replication protein N (NCBI) | compare |
| b2576 | srmB | +3.9 | 6.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b0720 | gltA | +3.9 | 21.9 | citrate synthase (NCBI) | compare |
| b2216 | rcsD | +3.8 | 12.8 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | compare |
| b3627 | rfaI | +3.8 | 18.8 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b2528 | iscA | +3.8 | 2.6 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3631 | rfaG | +3.7 | 26.9 | glucosyltransferase I (NCBI) | compare |
| b0427 | yajR | +3.6 | 28.6 | putative transport protein (VIMSS) | compare |
| b1332 | ynaJ | +3.6 | 3.5 | predicted inner membrane protein (NCBI) | compare |
| b3181 | greA | +3.5 | 19.1 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b4234 | yjgA | +3.5 | 9.3 | hypothetical protein (NCBI) | compare |
| b3206 | npr | +3.5 | 15.3 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b3636 | rpmG | +3.5 | 3.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b4515 | ybgT | +3.5 | 8.4 | hypothetical protein (NCBI) | compare |
| b3414 | gntY | +3.5 | 7.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b4402 | yjjY | +3.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b3630 | rfaP | +3.4 | 18.6 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2829 | ptsP | +3.4 | 24.9 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3628 | rfaB | +3.4 | 16.7 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3183 | obgE | +3.3 | 2.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2814 | metZ | +3.3 | 4.0 | tRNA-Met (NCBI) | compare |
| b2688 | gshA | +3.1 | 16.4 | glutamate--cysteine ligase (NCBI) | compare |
| b4391 | yjjK | +3.1 | 22.4 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3778 | rep | +3.1 | 7.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2280 | nuoJ | +3.1 | 5.2 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2218 | rcsC | +3.1 | 22.4 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) | compare |
| b0759 | galE | +3.1 | 16.8 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b0438 | clpX | +3.1 | 10.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3232 | yhcM | +3.1 | 17.6 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b3203 | yhbH | +3.0 | 4.8 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b1831 | proQ | +3.0 | 11.3 | putative solute/DNA competence effector (NCBI) | compare |
| b2946 | yggJ | +3.0 | 15.0 | orf, hypothetical protein (VIMSS) | compare |
| b3860 | dsbA | +2.9 | 18.7 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b1658 | purR | +2.8 | 10.2 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3387 | dam | +2.8 | 20.2 | DNA adenine methylase (NCBI) | compare |
| b2819 | recD | +2.8 | 19.1 | exonuclease V (RecBCD complex), alpha chain (NCBI) | compare |
| b1612 | fumA | +2.8 | 9.1 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b0458 | ylaC | +2.8 | 19.2 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | +2.7 | 6.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2587 | kgtP | +2.5 | 5.8 | alpha-ketoglutarate transporter (NCBI) | compare |
| b4414 | tff | +2.5 | 3.0 | unknown RNA (NCBI) | compare |
| b3341 | rpsG | +2.5 | 1.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b2502 | ppx | +2.5 | 13.1 | exopolyphosphatase (NCBI) | compare |
| b3545 | proK | +2.4 | 3.2 | tRNA-Pro (NCBI) | compare |
| b2436 | hemF | +2.4 | 8.5 | coproporphyrinogen III oxidase (NCBI) | compare |
| b0464 | acrR | +2.4 | 16.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4371 | rsmC | +2.4 | 15.1 | 16S ribosomal RNA m2G1207 methyltransferase (NCBI) | compare |
| b1855 | lpxM | +2.4 | 5.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3166 | truB | +2.4 | 17.0 | tRNA pseudouridine synthase B (NCBI) | compare |
| b2096 | gatY | +2.3 | 7.7 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b4406 | yaeP | +2.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b4484 | cpxP | +2.2 | 4.0 | periplasmic protein combats stress (NCBI) | compare |
| b1989 | asnV | +2.2 | 5.8 | tRNA-Asn (NCBI) | compare |
| b2659 | b2659 | +2.2 | 4.4 | orf, hypothetical protein (VIMSS) | compare |
| b1234 | rssA | +2.2 | 6.5 | conserved protein (RefSeq) | compare |
| b1088 | yceD | +2.2 | 7.5 | hypothetical protein (NCBI) | compare |
| b2093 | gatB | +2.2 | 9.7 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b0216 | aspV | +2.2 | 5.2 | tRNA-Asp (NCBI) | compare |
| b3071 | yqjI | +2.1 | 3.9 | predicted transcriptional regulator (NCBI) | compare |
| b1777 | b1777 | +2.1 | 6.5 | orf, hypothetical protein (VIMSS) | compare |
| b2522 | sseB | +2.1 | 16.2 | enhanced serine sensitivity (VIMSS) | compare |
| b2584 | yfiQ | +2.0 | 9.7 | fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit (NCBI) | compare |
| b3609 | secB | +2.0 | 5.0 | export protein SecB (NCBI) | compare |
| b3257 | yhdT | +2.0 | 5.3 | conserved inner membrane protein (NCBI) | compare |
| b1920 | fliY | +2.0 | 3.2 | cystine transporter subunit (NCBI) | compare |
| b3388 | damX | +2.0 | 10.3 | hypothetical protein (NCBI) | compare |
| b1236 | galU | +2.0 | 2.8 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3210 | arcB | +2.0 | 9.8 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b3236 | mdh | +2.0 | 9.0 | malate dehydrogenase (NCBI) | compare |
| b3009 | yghB | +1.9 | 7.6 | conserved inner membrane protein (NCBI) | compare |
| b3803 | hemX | +1.9 | 11.7 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b4139 | aspA | +1.9 | 8.9 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2908 | pepP | +1.9 | 6.4 | proline aminopeptidase P II (NCBI) | compare |
| b2754 | ygbF | +1.9 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b1279 | yciS | +1.9 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b0467 | priC | +1.9 | 4.4 | primosomal replication protein N'' (NCBI) | compare |
| b3999 | yjaG | +1.9 | 6.2 | hypothetical protein (NCBI) | compare |
| b3133 | agaV | +1.8 | 2.4 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b1942 | fliJ | +1.8 | 3.3 | flagellar biosynthesis chaperone (NCBI) | compare |
| b0092 | ddlB | +1.8 | 6.7 | D-alanylalanine synthetase (NCBI) | compare |
| b0636 | ybeA | +1.8 | 8.7 | hypothetical protein (NCBI) | compare |
| b1984 | asnW | +1.8 | 1.8 | tRNA-Asn (NCBI) | compare |
| b0190 | yaeQ | +1.8 | 4.8 | hypothetical protein (NCBI) | compare |
| b1429 | tehA | +1.8 | 1.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1329 | b1329 | +1.8 | 9.9 | putative transport periplasmic protein (VIMSS) | compare |
| b1841 | yobA | +1.7 | 2.8 | hypothetical protein (NCBI) | compare |
| b3258 | panF | +1.7 | 10.4 | sodium/pantothenate symporter (VIMSS) | compare |
| b0460 | hha | +1.7 | 7.6 | modulator of gene expression, with H-NS (NCBI) | compare |
| b3349 | slyD | +1.7 | 7.7 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b2285 | nuoE | +1.7 | 1.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1086 | rluC | +1.7 | 7.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3784 | rfe | +1.7 | 11.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1840 | yebZ | +1.7 | 8.5 | predicted inner membrane protein (NCBI) | compare |
| b0393 | rdgC | +1.7 | 10.4 | recombination associated protein (NCBI) | compare |
| b2743 | pcm | +1.7 | 5.3 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b1143 | ymfI | +1.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0955 | ycbZ | +1.6 | 9.6 | predicted peptidase (NCBI) | compare |
| b0081 | mraZ | +1.6 | 8.9 | hypothetical protein (NCBI) | compare |
| b0931 | pncB | +1.6 | 5.6 | nicotinate phosphoribosyltransferase (NCBI) | compare |
| b1676 | pykF | +1.6 | 3.9 | pyruvate kinase (NCBI) | compare |
| b3095 | yqjA | +1.6 | 6.0 | conserved inner membrane protein (NCBI) | compare |
| b3789 | rffH | +1.6 | 6.8 | glucose-1-phosphate thymidylyltransferase (NCBI) | compare |
| b1281 | pyrF | +1.6 | 2.1 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b0840 | deoR | +1.5 | 3.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0440 | hupB | +1.5 | 4.9 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b1891 | flhC | +1.5 | 4.0 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b0869 | ybjT | +1.5 | 8.2 | putative dTDP-glucose enzyme (VIMSS) | compare |
| b2095 | gatZ | +1.5 | 3.8 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b4000 | hupA | +1.5 | 5.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1438 | ydcQ | +1.4 | 3.2 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4505 | insX | +1.4 | 2.3 | predicted IS protein (RefSeq) | compare |
| b3190 | yrbA | +1.4 | 4.1 | orf, hypothetical protein (VIMSS) | compare |
| b2283 | nuoG | +1.4 | 3.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b0192 | nlpE | +1.4 | 3.4 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b1540 | ydfH | +1.4 | 2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2281 | nuoI | +1.4 | 1.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b4370 | leuQ | +1.4 | 2.4 | tRNA-Leu (NCBI) | compare |
| b3802 | hemY | +1.4 | 9.8 | predicted protoheme IX synthesis protein (NCBI) | compare |
| b4627 | ykfL | +1.4 | 4.1 | no description | compare |
| b0082 | mraW | +1.4 | 3.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3751 | rbsB | +1.4 | 4.3 | D-ribose transporter subunit (NCBI) | compare |
| b1854 | pykA | +1.4 | 6.7 | pyruvate kinase (NCBI) | compare |
| b3252 | yhdA | +1.4 | 9.3 | conserved inner membrane protein (NCBI) | compare |
| b2479 | gcvR | +1.4 | 3.3 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2286 | nuoC | +1.4 | 2.4 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3761 | trpT | +1.3 | 1.8 | tRNA-Trp (NCBI) | compare |
| b2278 | nuoL | +1.3 | 3.6 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4646 | yrdE | +1.3 | 1.9 | no description | compare |
| b0722 | sdhD | +1.3 | 2.1 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1213 | ychQ | +1.3 | 3.4 | predicted transcriptional regulator (NCBI) | compare |
| b0437 | clpP | +1.3 | 2.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0929 | ompF | +1.3 | 5.8 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b4426 | isrA | +1.3 | 1.6 | unknown RNA (NCBI) | compare |
| b4381 | deoC | +1.3 | 3.7 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b2083 | yegZ | +1.3 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b2282 | nuoH | +1.3 | 0.8 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2181 | yejG | +1.3 | 4.5 | hypothetical protein (NCBI) | compare |
| b0473 | htpG | +1.3 | 7.4 | heat shock protein 90 (NCBI) | compare |
| b3788 | rffG | +1.3 | 5.4 | dTDP-glucose 4,6-dehydratase (NCBI) | compare |
| b1294 | sapA | +1.3 | 4.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2288 | nuoA | +1.3 | 2.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0741 | pal | +1.3 | 1.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4577 | sgrS | +1.3 | 2.6 | small antisense RNA (NCBI) | compare |
| b2277 | nuoM | +1.3 | 2.5 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1161 | ycgX | +1.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b4255 | yjgD | +1.3 | 3.7 | hypothetical protein (NCBI) | compare |
| b0862 | artQ | +1.3 | 2.0 | arginine transporter subunit (NCBI) | compare |
| b2392 | mntH | +1.3 | 6.2 | manganese transport protein MntH (NCBI) | compare |
| b0065 | yabI | +1.3 | 5.5 | conserved inner membrane protein (NCBI) | compare |
| b2804 | fucU | +1.3 | 3.3 | L-fucose mutarotase (NCBI) | compare |
| b3810 | yigA | +1.3 | 7.7 | hypothetical protein (NCBI) | compare |
| b2532 | yfhQ | +1.2 | 5.7 | predicted methyltransferase (NCBI) | compare |
| b0423 | thiI | +1.2 | 4.6 | thiamine biosynthesis protein ThiI (NCBI) | compare |
| b4369 | leuP | +1.2 | 2.8 | tRNA-Leu (NCBI) | compare |
| b3197 | kdsD | +1.2 | 5.9 | D-arabinose 5-phosphate isomerase (NCBI) | compare |
| b4214 | cysQ | +1.2 | 8.0 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b0121 | speE | +1.2 | 3.9 | spermidine synthase (NCBI) | compare |
| b4170 | mutL | +1.2 | 5.5 | DNA mismatch repair protein (NCBI) | compare |
| b3764 | yifE | +1.2 | 5.0 | hypothetical protein (NCBI) | compare |
| b0122 | yacC | +1.2 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0447 | ybaO | +1.2 | 3.5 | putative LRP-like transcriptional regulator (VIMSS) | compare |
| b0088 | murD | +1.2 | 1.2 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2538 | hcaE | +1.2 | 2.1 | 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI) | compare |
| b0494 | tesA | +1.2 | 3.8 | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 (NCBI) | compare |
| b1284 | yciT | +1.2 | 3.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1231 | tyrT | +1.2 | 1.1 | tRNA-Tyr (NCBI) | compare |
| b0386 | proC | +1.2 | 1.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1439 | ydcR | +1.1 | 6.3 | fused predicted DNA-binding transcriptional regulator/predicted amino transferase (NCBI) | compare |
| b3196 | yrbG | +1.1 | 4.6 | predicted calcium/sodium:proton antiporter (NCBI) | compare |
| b3867 | hemN | +1.1 | 7.8 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b3766 | ilvL | +1.1 | 3.0 | ilvG operon leader peptide (NCBI) | compare |
| b4441 | glmY | +1.1 | 2.0 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1918 | yecS | +1.1 | 2.4 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1847 | yebF | +1.1 | 1.5 | predicted protein (RefSeq) | compare |
| b2531 | iscR | +1.1 | 0.8 | DNA-binding transcriptional repressor (NCBI) | compare |