| | gene | name | fitness | t score | description | |
|---|
| b1244 | oppB | +2.2 | 14.2 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b1095 | fabF | +2.1 | 8.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1247 | oppF | +2.0 | 10.8 | oligopeptide transporter subunit (NCBI) | compare |
| b2469 | narQ | +2.0 | 5.0 | sensory histidine kinase in two-component regulatory system with NarP (NarL) (NCBI) | compare |
| b1243 | oppA | +1.9 | 11.4 | oligopeptide transporter subunit (NCBI) | compare |
| b1246 | oppD | +1.9 | 11.5 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b1245 | oppC | +1.8 | 8.2 | oligopeptide transporter subunit (NCBI) | compare |
| b3911 | cpxA | +1.6 | 11.7 | two-component sensor protein (NCBI) | compare |
| b2684 | mprA | +1.6 | 4.8 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b3390 | aroK | +1.2 | 2.9 | shikimate kinase I (NCBI) | compare |
| b2642 | yfjW | +1.2 | 2.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1058 | yceO | +1.1 | 0.8 | hypothetical protein (NCBI) | compare |
| b1936 | intG | +1.1 | 1.4 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1607 | ydgC | +1.1 | 3.4 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4133 | cadC | +1.1 | 9.9 | DNA-binding transcriptional activator (NCBI) | compare |
| b3979 | thrT | +1.0 | 0.8 | tRNA-Thr (NCBI) | compare |
| b0464 | acrR | +1.0 | 7.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4585 | sroB | +1.0 | 2.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b4313 | fimE | +0.9 | 7.7 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b2078 | baeS | +0.9 | 2.3 | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | compare |
| b2217 | rcsB | +0.9 | 6.7 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b1627 | rsxA | +0.8 | 4.0 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b1182 | hlyE | +0.8 | 0.7 | hemolysin E (VIMSS) | compare |
| b3146 | yraL | +0.7 | 5.6 | predicted methyltransferase (NCBI) | compare |
| b1693 | aroD | +0.7 | 3.3 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1236 | galU | +0.7 | 2.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2181 | yejG | +0.7 | 4.2 | hypothetical protein (NCBI) | compare |
| b0232 | yafN | +0.7 | 0.3 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2531 | iscR | +0.7 | 1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4426 | isrA | +0.7 | 2.5 | unknown RNA (NCBI) | compare |
| b1049 | mdoH | +0.7 | 5.5 | glucosyltransferase MdoH (NCBI) | compare |
| b2179 | yejE | +0.7 | 4.1 | predicted oligopeptide transporter subunit (NCBI) | compare |
| b1954 | dsrA | +0.7 | 2.5 | regulatory antisense RNA (NCBI) | compare |
| b1628 | rsxB | +0.7 | 2.3 | electron transport complex protein RnfB (NCBI) | compare |
| b4383 | deoB | +0.7 | 5.2 | phosphopentomutase (NCBI) | compare |
| b2189 | proL | +0.7 | 2.4 | tRNA-Pro (NCBI) | compare |
| b1505 | ydeT | +0.7 | 1.3 | hypothetical protein (RefSeq) | compare |
| b2502 | ppx | +0.7 | 5.1 | exopolyphosphatase (NCBI) | compare |
| b1874 | cutC | +0.7 | 0.9 | copper homeostasis protein (NCBI) | compare |
| b1253 | yciA | +0.7 | 1.7 | predicted hydrolase (NCBI) | compare |
| b1001 | yccE | +0.7 | 0.4 | hypothetical protein (NCBI) | compare |
| b1497 | b1497 | +0.6 | 0.3 | putative enzyme (VIMSS) | compare |
| b1159 | mcrA | +0.6 | 1.2 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b0929 | ompF | +0.6 | 4.2 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b3397 | nudE | +0.6 | 5.3 | ADP-ribose diphosphatase (NCBI) | compare |
| b1600 | mdtJ | +0.6 | 1.5 | multidrug efflux system transporter (NCBI) | compare |
| b3194 | yrbE | +0.6 | 4.7 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3238 | yhcN | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1576 | ydfD | +0.6 | 0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1164 | ycgZ | +0.6 | 1.5 | hypothetical protein (NCBI) | compare |
| b3429 | glgA | +0.6 | 5.2 | glycogen synthase (NCBI) | compare |
| b2934 | cmtB | +0.6 | 0.8 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1632 | rsxE | +0.6 | 4.4 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b2346 | vacJ | +0.6 | 4.4 | predicted lipoprotein (NCBI) | compare |
| b1690 | ydiM | +0.6 | 1.9 | predicted transporter (NCBI) | compare |
| b3755 | yieP | +0.6 | 3.6 | predicted transcriptional regulator (NCBI) | compare |
| b1709 | btuD | +0.6 | 0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b2177 | yejA | +0.6 | 4.7 | orf, hypothetical protein (VIMSS) | compare |
| b2180 | yejF | +0.6 | 4.5 | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) | compare |
| b1630 | rsxD | +0.6 | 3.4 | electron transport complex protein RnfD (NCBI) | compare |
| b2741 | rpoS | +0.6 | 4.6 | RNA polymerase sigma factor (NCBI) | compare |
| b4246 | pyrL | +0.6 | 1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b1347 | ydaC | +0.6 | 0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b3206 | npr | +0.6 | 3.4 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1824 | yobF | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b1048 | mdoG | +0.6 | 3.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3107 | yhaL | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3779 | gpp | +0.6 | 5.2 | guanosine pentaphosphatase/exopolyphosphatase (NCBI) | compare |
| b1545 | pinQ | +0.6 | 0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b2659 | b2659 | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2911 | ssrS | +0.6 | 1.3 | 6S regulatory RNA (NCBI) | compare |
| b1493 | gadB | +0.6 | 0.9 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b3443 | yrhA | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1670 | ydhU | +0.5 | 2.6 | predicted cytochrome (NCBI) | compare |
| b1823 | cspC | +0.5 | 2.1 | stress protein, member of the CspA-family (NCBI) | compare |
| b2618 | b2618 | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1332 | ynaJ | +0.5 | 0.5 | predicted inner membrane protein (NCBI) | compare |
| b0858 | ybjO | +0.5 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b1499 | ydeO | +0.5 | 0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1765 | ydjA | +0.5 | 0.7 | predicted oxidoreductase (NCBI) | compare |
| b1671 | ydhX | +0.5 | 2.0 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b0782 | moaB | +0.5 | 1.6 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b4041 | plsB | +0.5 | 1.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1257 | yciE | +0.5 | 0.2 | hypothetical protein (NCBI) | compare |
| b2734 | pphB | +0.5 | 2.7 | serine/threonine-specific protein phosphatase 2 (NCBI) | compare |
| b1075 | flgD | +0.5 | 2.3 | flagellar basal body rod modification protein D (NCBI) | compare |
| b1284 | yciT | +0.5 | 2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2012 | yeeD | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b2136 | yohD | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3753 | rbsR | +0.5 | 4.2 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b1726 | yniB | +0.5 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b3884 | yihW | +0.5 | 3.0 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b4655 | ythA | +0.5 | 1.2 | expressed protein (RefSeq) | compare |
| b2178 | yejB | +0.5 | 2.9 | predicted oligopeptide transporter subunit (NCBI) | compare |
| b3009 | yghB | +0.5 | 3.2 | conserved inner membrane protein (NCBI) | compare |
| b3495 | uspA | +0.5 | 4.2 | universal stress global response regulator (NCBI) | compare |
| b1363 | trkG | +0.5 | 0.3 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b2450 | yffS | +0.5 | 1.2 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b0661 | miaB | +0.5 | 4.0 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b1480 | sra | +0.5 | 0.7 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1492 | gadC | +0.4 | 3.3 | predicted glutamate:gamma-aminobutyric acid antiporter (NCBI) | compare |
| b1306 | pspC | +0.4 | 1.3 | DNA-binding transcriptional activator (NCBI) | compare |
| b1167 | ymgC | +0.4 | 0.2 | hypothetical protein (NCBI) | compare |
| b1409 | ynbB | +0.4 | 0.6 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2229 | b2229 | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1704 | aroH | +0.4 | 2.9 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible (NCBI) | compare |
| b2214 | yojL | +0.4 | 2.7 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b4618 | tisB | +0.4 | 3.1 | lexA-regulated toxic peptide (RefSeq) | compare |
| b0955 | ycbZ | +0.4 | 3.2 | predicted peptidase (NCBI) | compare |
| b2637 | yfjT | +0.4 | 1.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b2528 | iscA | +0.4 | 0.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3281 | aroE | +0.4 | 3.4 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b2145 | yeiS | +0.4 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b0736 | ybgC | +0.4 | 2.0 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b0806 | ybiM | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1400 | paaY | +0.4 | 1.1 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b2007 | yeeX | +0.4 | 0.8 | conserved protein (RefSeq) | compare |
| b1132 | hflD | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b0218 | yafU | +0.4 | 1.7 | predicted inner membrane protein (RefSeq) | compare |
| b2960 | yggH | +0.4 | 2.6 | tRNA(m7G46)-methyltransferase (NCBI) | compare |
| b1861 | ruvA | +0.4 | 0.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3192 | yrbC | +0.4 | 3.4 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2570 | rseC | +0.4 | 2.5 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b1205 | ychH | +0.4 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b1007 | b1007 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1648 | b1648 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1951 | rcsA | +0.4 | 0.9 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2377 | yfdY | +0.4 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b1502 | ydeQ | +0.4 | 1.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0803 | ybiI | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1407 | ydbD | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1983 | yeeN | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1490 | yddV | +0.4 | 2.1 | predicted diguanylate cyclase (RefSeq) | compare |
| b4631 | ykgQ | +0.4 | 1.3 | no description | compare |
| b0755 | gpmA | +0.4 | 2.7 | phosphoglyceromutase (NCBI) | compare |
| b3341 | rpsG | +0.4 | 0.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1727 | yniC | +0.4 | 1.2 | predicted hydrolase (NCBI) | compare |
| b1712 | ihfA | +0.4 | 0.2 | integration host factor subunit alpha (NCBI) | compare |
| b0065 | yabI | +0.4 | 2.1 | conserved inner membrane protein (NCBI) | compare |
| b1591 | b1591 | +0.4 | 1.3 | putative oxidoreductase component (VIMSS) | compare |
| b3611 | yibN | +0.4 | 2.3 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b1429 | tehA | +0.4 | 0.7 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3816 | corA | +0.4 | 3.0 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b1760 | ynjH | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b1242 | ychE | +0.4 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b3466 | yhhL | +0.4 | 2.0 | conserved inner membrane protein (NCBI) | compare |
| b1848 | yebG | +0.4 | 0.9 | conserved protein regulated by LexA (NCBI) | compare |
| b3432 | glgB | +0.4 | 3.2 | glycogen branching enzyme (NCBI) | compare |
| b0001 | thrL | +0.4 | 1.9 | thr operon leader peptide (NCBI) | compare |
| b1642 | slyA | +0.4 | 1.4 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b2571 | rseB | +0.4 | 2.5 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b1263 | trpD | +0.4 | 1.5 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b0377 | sbmA | +0.4 | 2.8 | predicted transporter (NCBI) | compare |
| b0530 | sfmA | +0.3 | 1.6 | putative fimbrial-like protein (VIMSS) | compare |
| b1038 | csgF | +0.3 | 1.6 | predicted transport protein (NCBI) | compare |
| b1368 | ynaA | +0.3 | 1.2 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b4222 | ytfP | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b2479 | gcvR | +0.3 | 2.0 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b4557 | yidD | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b0759 | galE | +0.3 | 2.6 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b4128 | yjdK | +0.3 | 0.3 | hypothetical protein (NCBI) | compare |
| b1733 | chbG | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b0965 | b0965 | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2200 | ccmB | +0.3 | 2.1 | heme exporter subunit (NCBI) | compare |
| b2792 | yqcC | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b3195 | yrbF | +0.3 | 2.8 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1583 | ynfB | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b4520 | ymgF | +0.3 | 0.7 | hypothetical protein (NCBI) | compare |
| b1325 | ycjG | +0.3 | 1.7 | putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) | compare |
| b4559 | yjdO | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1950 | fliR | +0.3 | 1.4 | flagellar biosynthesis protein R (NCBI) | compare |
| b3812 | yigB | +0.3 | 2.2 | predicted hydrolase (NCBI) | compare |
| b1579 | intQ | +0.3 | 1.2 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b4406 | yaeP | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1689 | b1689 | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3858 | yihD | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1518 | lsrG | +0.3 | 1.1 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b0866 | ybjQ | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b3071 | yqjI | +0.3 | 1.8 | predicted transcriptional regulator (NCBI) | compare |
| b4596 | yciZ | +0.3 | 1.2 | hypothetical protein (RefSeq) | compare |
| b1949 | fliQ | +0.3 | 1.5 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1168 | b1168 | +0.3 | 1.7 | putative proteases (VIMSS) | compare |
| b3191 | yrbB | +0.3 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0753 | ybgS | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1618 | uidR | +0.3 | 1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4214 | cysQ | +0.3 | 2.7 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b0014 | dnaK | +0.3 | 1.2 | molecular chaperone DnaK (NCBI) | compare |
| b3766 | ilvL | +0.3 | 1.3 | ilvG operon leader peptide (NCBI) | compare |
| b1969 | yedW | +0.3 | 1.6 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b0959 | yccR | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b3802 | hemY | +0.3 | 2.7 | predicted protoheme IX synthesis protein (NCBI) | compare |
| b2586 | yfiM | +0.3 | 1.6 | predicted protein (RefSeq) | compare |
| b1062 | pyrC | +0.3 | 1.3 | dihydroorotase (NCBI) | compare |
| b3672 | ivbL | +0.3 | 2.0 | ilvB operon leader peptide (NCBI) | compare |
| b2055 | wcaE | +0.3 | 0.1 | predicted glycosyl transferase (NCBI) | compare |
| b0213 | yafS | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3609 | secB | +0.3 | 0.8 | export protein SecB (NCBI) | compare |
| b0294 | ykgK | +0.3 | 1.4 | predicted regulator (NCBI) | compare |
| b0104 | guaC | +0.3 | 2.5 | guanosine 5'-monophosphate oxidoreductase (NCBI) | compare |
| b1309 | ycjM | +0.3 | 1.5 | putative polysaccharide hydrolase (VIMSS) | compare |