| | gene | name | fitness | t score | description | |
|---|
| b1361 | ydaW | -2.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2259 | pmrD | -0.9 | -1.6 | polymyxin resistance protein B (VIMSS) | compare |
| b2446 | yffO | -0.9 | -2.6 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0990 | cspG | -0.8 | -0.9 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4451 | ryhB | -0.8 | -1.6 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2258 | b2258 | -0.8 | -1.5 | putative transport/receptor protein (VIMSS) | compare |
| b1724 | ydiZ | -0.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b2597 | yfiA | -0.7 | -2.1 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b1551 | b1551 | -0.7 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0627 | tatE | -0.7 | -1.7 | twin arginine translocase protein E (NCBI) | compare |
| b2642 | yfjW | -0.7 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1273 | yciN | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b4570 | lomR | -0.6 | -1.8 | no description | compare |
| b1368 | ynaA | -0.6 | -2.3 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b4535 | yniD | -0.6 | -1.0 | predicted protein (RefSeq) | compare |
| b2071 | yegJ | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b2698 | recX | -0.5 | -1.7 | RecA regulator RecX (NCBI) | compare |
| b0836 | yliH | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b2082 | ogrK | -0.5 | -1.0 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b1727 | yniC | -0.5 | -1.4 | predicted hydrolase (NCBI) | compare |
| b1563 | relE | -0.5 | -1.8 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1685 | ydiH | -0.5 | -1.2 | predicted protein (RefSeq) | compare |
| b2618 | b2618 | -0.5 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1842 | holE | -0.5 | -1.6 | DNA polymerase III, theta subunit (NCBI) | compare |
| b4675 | yoaJ | -0.5 | -2.4 | expressed protein (RefSeq) | compare |
| b1058 | yceO | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1524 | yneH | -0.4 | -0.7 | predicted glutaminase (NCBI) | compare |
| b0850 | ybjC | -0.4 | -2.3 | predicted inner membrane protein (NCBI) | compare |
| b4568 | ytjA | -0.4 | -1.4 | predicted protein (RefSeq) | compare |
| b1811 | yoaH | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b1640 | ydhH | -0.4 | -2.0 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b3199 | yrbK | -0.4 | -1.5 | hypothetical protein (NCBI) | compare |
| b1684 | sufA | -0.4 | -1.6 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b3916 | pfkA | -0.4 | -1.5 | 6-phosphofructokinase (NCBI) | compare |
| b2853 | ygeI | -0.4 | -0.3 | hypothetical protein (NCBI) | compare |
| b2352 | yfdI | -0.4 | -0.5 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b2237 | inaA | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b0934 | ycbM | -0.4 | -1.0 | putative transport system permease protein (VIMSS) | compare |
| b1567 | intK | -0.4 | -1.6 | Qin prophage; predicted protein (RefSeq) | compare |
| b2343 | b2343 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4458 | oxyS | -0.4 | -0.9 | global regulatory RNA (NCBI) | compare |
| b4494 | arpB | -0.4 | -1.1 | no description | compare |
| b1908 | yecA | -0.4 | -2.5 | conserved metal-binding protein (NCBI) | compare |
| b1493 | gadB | -0.4 | -0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1882 | cheY | -0.4 | -0.4 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1266 | yciV | -0.4 | -2.2 | hypothetical protein (NCBI) | compare |
| b0081 | mraZ | -0.4 | -2.6 | hypothetical protein (NCBI) | compare |
| b1883 | cheB | -0.4 | -2.6 | chemotaxis-specific methylesterase (NCBI) | compare |
| b2248 | yfaX | -0.4 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4655 | ythA | -0.4 | -0.9 | expressed protein (RefSeq) | compare |
| b4630 | ykgP | -0.4 | -1.2 | no description | compare |
| b1609 | rstB | -0.4 | -2.0 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b4416 | rybA | -0.4 | -0.9 | unknown RNA (NCBI) | compare |
| b0787 | ybhM | -0.4 | -1.9 | conserved inner membrane protein (NCBI) | compare |
| b2646 | ypjF | -0.4 | -1.7 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1025 | ycdT | -0.4 | -0.9 | predicted diguanylate cyclase (NCBI) | compare |
| b0495 | ybbA | -0.4 | -1.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4363 | yjjB | -0.4 | -2.1 | conserved inner membrane protein (RefSeq) | compare |
| b1566 | flxA | -0.4 | -1.6 | Qin prophage; predicted protein (NCBI) | compare |
| b2110 | yehC | -0.4 | -0.6 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2144 | sanA | -0.4 | -3.2 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2650 | ypjC | -0.4 | -0.2 | hypothetical protein (RefSeq) | compare |
| b4135 | yjdC | -0.4 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1134 | ymfB | -0.4 | -1.0 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b2362 | yfdS | -0.4 | -1.5 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1633 | nth | -0.4 | -1.6 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b1359 | ydaU | -0.4 | -1.5 | Rac prophage; conserved protein (NCBI) | compare |
| b1171 | b1171 | -0.4 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1914 | uvrY | -0.4 | -2.2 | response regulator (NCBI) | compare |
| b1692 | ydiB | -0.3 | -1.5 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b1796 | yoaG | -0.3 | -2.2 | hypothetical protein (NCBI) | compare |
| b0643 | ybeL | -0.3 | -2.3 | hypothetical protein (NCBI) | compare |
| b3280 | yrdB | -0.3 | -2.0 | hypothetical protein (NCBI) | compare |
| b1148 | ymfM | -0.3 | -1.5 | e14 prophage; predicted protein (NCBI) | compare |
| b4646 | yrdE | -0.3 | -1.7 | no description | compare |
| b1325 | ycjG | -0.3 | -1.7 | putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) | compare |
| b3100 | yqjK | -0.3 | -1.7 | hypothetical protein (NCBI) | compare |
| b0830 | yliB | -0.3 | -2.7 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b0580 | ybdJ | -0.3 | -1.1 | predicted inner membrane protein (NCBI) | compare |
| b1513 | lsrA | -0.3 | -1.7 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4522 | yciX_1 | -0.3 | -0.9 | hypothetical protein (NCBI) | compare |
| b1793 | yoaF | -0.3 | -1.6 | conserved outer membrane protein (NCBI) | compare |
| b1450 | b1450 | -0.3 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4255 | yjgD | -0.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b1177 | ycgJ | -0.3 | -1.9 | hypothetical protein (NCBI) | compare |
| b1593 | b1593 | -0.3 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2291 | yfbR | -0.3 | -1.7 | hypothetical protein (NCBI) | compare |
| b0453 | ybaY | -0.3 | -2.4 | glycoprotein/polysaccharide metabolism (VIMSS) | compare |
| b1951 | rcsA | -0.3 | -0.6 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b4408 | csrB | -0.3 | -1.4 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b4513 | kdpF | -0.3 | -1.2 | potassium ion accessory transporter subunit (NCBI) | compare |
| b4493 | gapC | -0.3 | -1.4 | no description | compare |
| b2019 | hisG | -0.3 | -2.3 | ATP phosphoribosyltransferase (NCBI) | compare |
| b3973 | birA | -0.3 | -1.1 | biotin--protein ligase (NCBI) | compare |
| b1429 | tehA | -0.3 | -0.6 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0326 | yahL | -0.3 | -0.8 | hypothetical protein (NCBI) | compare |
| b2078 | baeS | -0.3 | -2.0 | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | compare |
| b1182 | hlyE | -0.3 | -0.2 | hemolysin E (VIMSS) | compare |
| b0226 | dinJ | -0.3 | -1.6 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2123 | yehR | -0.3 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0001 | thrL | -0.3 | -0.9 | thr operon leader peptide (NCBI) | compare |
| b4573 | insZ | -0.3 | -1.7 | no description | compare |
| b0862 | artQ | -0.3 | -1.4 | arginine transporter subunit (NCBI) | compare |
| b4609 | ryfD | -0.3 | -1.7 | Novel sRNA, function unknown (RefSeq) | compare |
| b0660 | ybeZ | -0.3 | -1.9 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b1217 | chaB | -0.3 | -0.9 | cation transport regulator (NCBI) | compare |
| b0147 | yadP | -0.3 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1868 | yecE | -0.3 | -1.7 | hypothetical protein (NCBI) | compare |
| b1328 | ycjZ | -0.3 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2435 | amiA | -0.3 | -2.0 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0435 | bolA | -0.3 | -1.7 | possible regulator of murein genes (VIMSS) | compare |
| b0157 | yadS | -0.3 | -1.7 | conserved inner membrane protein (NCBI) | compare |
| b1858 | znuC | -0.3 | -2.0 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b0726 | sucA | -0.3 | -1.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b4543 | ypaA | -0.3 | -1.0 | predicted protein (NCBI) | compare |
| b1121 | ycfZ | -0.3 | -0.7 | predicted inner membrane protein (NCBI) | compare |
| b4523 | yciX | -0.3 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0977 | hyaF | -0.3 | -1.8 | protein involved in nickel incorporation into hydrogenase-1 proteins (NCBI) | compare |
| b3934 | cytR | -0.3 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0817 | mntR | -0.3 | -1.6 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b3961 | oxyR | -0.3 | -2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0097 | yacA | -0.3 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4641 | yoeH | -0.3 | -1.7 | no description | compare |
| b4484 | cpxP | -0.3 | -1.9 | periplasmic protein combats stress (NCBI) | compare |
| b1581 | rspA | -0.3 | -1.3 | predicted dehydratase (NCBI) | compare |
| b2438 | b2438 | -0.3 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3761 | trpT | -0.3 | -0.7 | tRNA-Trp (NCBI) | compare |
| b4544 | yfbW | -0.3 | -1.2 | hypothetical protein (NCBI) | compare |
| b2434 | b2434 | -0.3 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2342 | yfcY | -0.3 | -2.1 | acetyl-CoA acetyltransferase (NCBI) | compare |
| b2540 | hcaC | -0.3 | -1.2 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b4001 | yjaH | -0.3 | -1.7 | hypothetical protein (NCBI) | compare |
| b2125 | yehT | -0.3 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2473 | ypfH | -0.3 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2266 | elaB | -0.3 | -0.8 | hypothetical protein (NCBI) | compare |
| b4068 | yjcH | -0.3 | -1.2 | required for glycolate transport, with actP (from data) | compare |
| b1063 | yceB | -0.3 | -1.4 | predicted lipoprotein (NCBI) | compare |
| b1523 | yneG | -0.3 | -0.9 | hypothetical protein (NCBI) | compare |
| b1752 | ydjZ | -0.3 | -1.0 | conserved inner membrane protein (NCBI) | compare |
| b2916 | argP | -0.3 | -1.8 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b0652 | gltL | -0.3 | -1.4 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b1499 | ydeO | -0.3 | -0.1 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1000 | cbpA | -0.3 | -1.3 | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK (NCBI) | compare |
| b3188 | sfsB | -0.3 | -1.7 | DNA-binding transcriptional activator of maltose metabolism (NCBI) | compare |
| b4456 | ryiA | -0.3 | -1.8 | regulatory sRNA (NCBI) | compare |
| b1422 | ydcI | -0.3 | -1.4 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b2495 | yfgD | -0.3 | -1.4 | predicted oxidoreductase (NCBI) | compare |
| b3742 | mioC | -0.3 | -1.2 | flavodoxin (NCBI) | compare |
| b3156 | yhbS | -0.3 | -2.0 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1308 | pspE | -0.3 | -1.3 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b2666 | yqaE | -0.3 | -1.5 | predicted membrane protein (NCBI) | compare |
| b0381 | ddlA | -0.3 | -1.6 | D-alanylalanine synthetase (NCBI) | compare |
| b1952 | dsrB | -0.3 | -1.8 | hypothetical protein (NCBI) | compare |
| b1953 | b1953 | -0.3 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1332 | ynaJ | -0.3 | -0.3 | predicted inner membrane protein (NCBI) | compare |
| b1434 | ydcN | -0.3 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3119 | tdcR | -0.3 | -0.8 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b0857 | potI | -0.3 | -1.5 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0270 | yagG | -0.2 | -1.8 | CP4-6 prophage; predicted sugar transporter (NCBI) | compare |
| b2624 | alpA | -0.2 | -1.7 | CP4-57 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1114 | mfd | -0.2 | -1.8 | transcription-repair coupling factor (NCBI) | compare |
| b1918 | yecS | -0.2 | -0.9 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0840 | deoR | -0.2 | -1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1877 | yecT | -0.2 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3341 | rpsG | -0.2 | -0.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b0981 | yccC | -0.2 | -1.7 | cryptic autophosphorylating protein tyrosine kinase Etk (NCBI) | compare |
| b1691 | ydiN | -0.2 | -1.1 | predicted transporter (RefSeq) | compare |
| b0746 | valZ | -0.2 | -0.9 | tRNA-Val (NCBI) | compare |
| b1939 | fliG | -0.2 | -1.4 | flagellar motor switch protein G (NCBI) | compare |
| b4508 | peaD | -0.2 | -1.2 | putative sensory transduction regulator (VIMSS) | compare |
| b1296 | ycjJ | -0.2 | -0.9 | putative amino acid/amine transport protein (VIMSS) | compare |
| b2722 | hycD | -0.2 | -1.8 | hydrogenase 3, membrane subunit (NCBI) | compare |
| b1231 | tyrT | -0.2 | -0.4 | tRNA-Tyr (NCBI) | compare |
| b4118 | melR | -0.2 | -1.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0191 | yaeJ | -0.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b0398 | sbcD | -0.2 | -1.6 | exonuclease, dsDNA, ATP-dependent (NCBI) | compare |
| b3764 | yifE | -0.2 | -1.2 | hypothetical protein (NCBI) | compare |
| b0764 | modB | -0.2 | -1.6 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1651 | gloA | -0.2 | -0.7 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b0355 | frmB | -0.2 | -1.7 | predicted esterase (NCBI) | compare |
| b2571 | rseB | -0.2 | -1.6 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b1187 | fadR | -0.2 | -1.5 | fatty acid metabolism regulator (NCBI) | compare |
| b1526 | yneJ | -0.2 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0818 | ybiR | -0.2 | -1.8 | predicted transporter (NCBI) | compare |
| b2454 | eutJ | -0.2 | -1.6 | predicted chaperonin, ethanolamine utilization protein (NCBI) | compare |
| b3125 | garR | -0.2 | -1.4 | tartronate semialdehyde reductase (RefSeq) | compare |
| b0042 | fixB | -0.2 | -1.7 | predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like (NCBI) | compare |
| b0686 | ybfF | -0.2 | -1.6 | hypothetical protein (NCBI) | compare |
| b2096 | gatY | -0.2 | -1.2 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b4454 | rdlD | -0.2 | -1.2 | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR-D repeat, with toxic peptide LdrD (RefSeq) | compare |
| b0082 | mraW | -0.2 | -1.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2236 | yfaE | -0.2 | -0.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b4561 | insM | -0.2 | -1.2 | transposase (RefSeq) | compare |
| b2752 | cysD | -0.2 | -1.2 | sulfate adenylyltransferase subunit 2 (NCBI) | compare |
| b0440 | hupB | -0.2 | -1.5 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b1783 | yeaG | -0.2 | -1.8 | yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b2494 | yfgC | -0.2 | -1.9 | predicted peptidase (NCBI) | compare |
| b4353 | yjiX | -0.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b1710 | btuE | -0.2 | -1.2 | predicted glutathione peroxidase (NCBI) | compare |