| | gene | name | fitness | t score | description | |
|---|
| b0912 | ihfB | +5.9 | 6.3 | integration host factor subunit beta (NCBI) | compare |
| b2215 | ompC | +4.9 | 13.7 | outer membrane porin protein C (NCBI) | compare |
| b0033 | carB | +4.0 | 19.6 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b4245 | pyrB | +3.9 | 19.3 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1874 | cutC | +3.8 | 6.2 | copper homeostasis protein (NCBI) | compare |
| b3405 | ompR | +3.3 | 4.8 | osmolarity response regulator (NCBI) | compare |
| b0032 | carA | +3.1 | 6.3 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0437 | clpP | +3.0 | 10.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3839 | tatC | +2.9 | 11.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0740 | tolB | +2.8 | 4.9 | translocation protein TolB precursor (NCBI) | compare |
| b3396 | mrcA | +2.7 | 23.4 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b1712 | ihfA | +2.6 | 2.4 | integration host factor subunit alpha (NCBI) | compare |
| b3609 | secB | +2.5 | 8.9 | export protein SecB (NCBI) | compare |
| b4202 | rpsR | +2.5 | 3.4 | 30S ribosomal protein S18 (NCBI) | compare |
| b0945 | pyrD | +2.5 | 14.8 | dihydroorotate dehydrogenase (NCBI) | compare |
| b4481 | rffT | +2.4 | 13.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3082 | ygjM | +2.4 | 5.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1281 | pyrF | +2.4 | 6.7 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b0053 | surA | +2.4 | 9.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2017 | yefM | +2.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | +2.4 | 11.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3792 | wzxE | +2.4 | 11.8 | O-antigen translocase (NCBI) | compare |
| b1062 | pyrC | +2.4 | 14.0 | dihydroorotase (NCBI) | compare |
| b3035 | tolC | +2.3 | 5.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3791 | rffA | +2.3 | 13.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0737 | tolQ | +2.3 | 2.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0741 | pal | +2.3 | 5.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3642 | pyrE | +2.2 | 6.6 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3790 | rffC | +2.2 | 10.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3387 | dam | +2.2 | 16.2 | DNA adenine methylase (NCBI) | compare |
| b0738 | tolR | +2.2 | 2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4246 | pyrL | +2.2 | 2.7 | pyrBI operon leader peptide (NCBI) | compare |
| b3169 | nusA | +2.1 | 4.9 | transcription elongation factor NusA (NCBI) | compare |
| b0739 | tolA | +2.1 | 4.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3404 | envZ | +2.1 | 8.4 | osmolarity sensor protein (NCBI) | compare |
| b1861 | ruvA | +2.1 | 2.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3147 | yraM | +2.0 | 15.8 | hypothetical protein (NCBI) | compare |
| b2912 | ygfA | +2.0 | 7.1 | putative ligase (VIMSS) | compare |
| b2516 | yfgA | +2.0 | 9.7 | hypothetical protein (NCBI) | compare |
| b1192 | ldcA | +1.9 | 7.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b3426 | glpD | +1.8 | 6.4 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1236 | galU | +1.8 | 6.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0222 | lpcA | +1.8 | 4.4 | phosphoheptose isomerase (NCBI) | compare |
| b0386 | proC | +1.8 | 6.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b3842 | rfaH | +1.8 | 9.3 | transcriptional activator RfaH (NCBI) | compare |
| b1830 | prc | +1.7 | 8.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1863 | ruvC | +1.7 | 2.4 | Holliday junction resolvase (NCBI) | compare |
| b3052 | rfaE | +1.7 | 7.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3026 | qseC | +1.6 | 4.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0049 | apaH | +1.5 | 3.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b3860 | dsbA | +1.5 | 9.9 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3787 | rffD | +1.5 | 11.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3621 | rfaC | +1.5 | 6.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3785 | wzzE | +1.5 | 11.6 | putative transport protein (VIMSS) | compare |
| b2830 | nudH | +1.5 | 1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4242 | mgtA | +1.4 | 11.4 | magnesium transporter (NCBI) | compare |
| b1235 | rssB | +1.4 | 8.4 | response regulator of RpoS (NCBI) | compare |
| b3786 | rffE | +1.4 | 11.6 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0683 | fur | +1.4 | 3.0 | ferric uptake regulator (NCBI) | compare |
| b1292 | sapC | +1.4 | 3.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0149 | mrcB | +1.4 | 11.7 | penicillin-binding protein 1b (NCBI) | compare |
| b3784 | rfe | +1.4 | 11.6 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3619 | rfaD | +1.4 | 4.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3631 | rfaG | +1.3 | 11.3 | glucosyltransferase I (NCBI) | compare |
| b0232 | yafN | +1.3 | 1.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2175 | spr | +1.3 | 6.0 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3620 | rfaF | +1.3 | 5.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4702 | mgtL | +1.3 | 2.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1084 | rne | +1.3 | 4.5 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2683 | ygaH | +1.3 | 4.4 | predicted inner membrane protein (NCBI) | compare |
| b3163 | nlpI | +1.3 | 6.3 | hypothetical protein (NCBI) | compare |
| b3794 | rffM | +1.2 | 8.2 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1286 | rnb | +1.2 | 3.8 | exoribonuclease II (NCBI) | compare |
| b1291 | sapD | +1.2 | 2.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1865 | nudB | +1.2 | 2.8 | dATP pyrophosphohydrolase (NCBI) | compare |
| b4172 | hfq | +1.2 | 1.4 | RNA-binding protein Hfq (NCBI) | compare |
| b1726 | yniB | +1.2 | 4.1 | predicted inner membrane protein (NCBI) | compare |
| b4006 | purH | +1.2 | 9.2 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b3390 | aroK | +1.1 | 2.4 | shikimate kinase I (NCBI) | compare |
| b1185 | dsbB | +1.1 | 4.5 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4218 | ytfL | +1.1 | 9.0 | predicted inner membrane protein (NCBI) | compare |
| b3630 | rfaP | +1.1 | 8.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1855 | lpxM | +1.1 | 4.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2312 | purF | +1.1 | 7.0 | amidophosphoribosyltransferase (NCBI) | compare |
| b0523 | purE | +1.1 | 5.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b4414 | tff | +1.1 | 2.4 | unknown RNA (NCBI) | compare |
| b1175 | minD | +1.1 | 5.9 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1111 | ycfQ | +1.1 | 3.7 | orf, hypothetical protein (VIMSS) | compare |
| b2476 | purC | +1.1 | 4.4 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b1290 | sapF | +1.1 | 2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1804 | rnd | +1.0 | 6.1 | ribonuclease D (NCBI) | compare |
| b1831 | proQ | +1.0 | 3.8 | putative solute/DNA competence effector (NCBI) | compare |
| b3962 | udhA | +1.0 | 6.5 | putative oxidoreductase (VIMSS) | compare |
| b2499 | purM | +1.0 | 5.1 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b1176 | minC | +1.0 | 4.1 | septum formation inhibitor (NCBI) | compare |
| b3706 | trmE | +1.0 | 4.2 | tRNA modification GTPase (NCBI) | compare |
| b1677 | lpp | +1.0 | 3.0 | murein lipoprotein (NCBI) | compare |
| b0161 | degP | +1.0 | 4.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0630 | lipB | +1.0 | 2.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0051 | ksgA | +0.9 | 5.3 | dimethyladenosine transferase (NCBI) | compare |
| b2911 | ssrS | +0.9 | 1.6 | 6S regulatory RNA (NCBI) | compare |
| b2557 | purL | +0.9 | 7.2 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b3236 | mdh | +0.9 | 6.6 | malate dehydrogenase (NCBI) | compare |
| b3389 | aroB | +0.9 | 7.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b3281 | aroE | +0.8 | 7.3 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0729 | sucD | +0.8 | 4.4 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b4239 | treC | +0.8 | 1.9 | trehalose-6-P hydrolase (NCBI) | compare |
| b0688 | pgm | +0.8 | 3.1 | phosphoglucomutase (NCBI) | compare |
| b4005 | purD | +0.8 | 6.3 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b3021 | ygiT | +0.8 | 3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1095 | fabF | +0.8 | 5.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3838 | tatB | +0.8 | 4.1 | sec-independent translocase (NCBI) | compare |
| b1936 | intG | +0.8 | 1.2 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3611 | yibN | +0.8 | 3.9 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b2414 | cysK | +0.8 | 6.0 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b1613 | manA | +0.8 | 2.2 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2951 | yggS | +0.8 | 4.2 | predicted enzyme (NCBI) | compare |
| b4179 | vacB | +0.8 | 4.3 | putative enzyme (VIMSS) | compare |
| b0522 | purK | +0.8 | 5.7 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3613 | yibP | +0.8 | 2.0 | putative membrane protein (VIMSS) | compare |
| b0889 | lrp | +0.8 | 3.6 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1693 | aroD | +0.8 | 5.1 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0200 | gmhB | +0.8 | 1.2 | hypothetical protein (NCBI) | compare |
| b3912 | cpxR | +0.8 | 5.8 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b1850 | eda | +0.7 | 2.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1103 | ycfF | +0.7 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2576 | srmB | +0.7 | 3.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b4128 | yjdK | +0.7 | 0.6 | hypothetical protein (NCBI) | compare |
| b3644 | yicC | +0.7 | 3.8 | hypothetical protein (NCBI) | compare |
| b2820 | recB | +0.7 | 0.5 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1105 | ycfM | +0.7 | 3.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0439 | lon | +0.7 | 3.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2313 | cvpA | +0.7 | 4.3 | membrane protein required for colicin V production (NCBI) | compare |
| b2518 | ndk | +0.7 | 2.4 | nucleoside diphosphate kinase (NCBI) | compare |
| b1600 | mdtJ | +0.7 | 1.8 | multidrug efflux system transporter (NCBI) | compare |
| b2363 | yfdT | +0.7 | 2.7 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1104 | ycfL | +0.7 | 1.7 | hypothetical protein (NCBI) | compare |
| b3290 | trkA | +0.7 | 1.3 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0632 | dacA | +0.7 | 4.9 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3778 | rep | +0.7 | 4.6 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3493 | pitA | +0.7 | 4.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b2531 | iscR | +0.7 | 2.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3204 | ptsN | +0.7 | 3.7 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1293 | sapB | +0.7 | 1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1860 | ruvB | +0.7 | 0.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b2569 | lepA | +0.7 | 3.0 | GTP-binding protein LepA (NCBI) | compare |
| b3055 | htrG | +0.6 | 5.0 | predicted signal transduction protein (SH3 domain) (NCBI) | compare |
| b2424 | cysU | +0.6 | 3.1 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3443 | yrhA | +0.6 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2688 | gshA | +0.6 | 4.4 | glutamate--cysteine ligase (NCBI) | compare |
| b1109 | ndh | +0.6 | 3.2 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1777 | b1777 | +0.6 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4163 | glyV | +0.6 | 2.0 | tRNA-Gly (NCBI) | compare |
| b2501 | ppk | +0.6 | 4.7 | polyphosphate kinase (NCBI) | compare |
| b3940 | metL | +0.6 | 4.5 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b3198 | kdsC | +0.6 | 2.8 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b4042 | dgkA | +0.6 | 0.8 | diacylglycerol kinase (NCBI) | compare |
| b2846 | yqeH | +0.6 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | +0.6 | 2.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0114 | aceE | +0.6 | 0.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2903 | gcvP | +0.6 | 5.1 | glycine dehydrogenase (NCBI) | compare |
| b2905 | gcvT | +0.6 | 4.1 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b0890 | ftsK | +0.6 | 2.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2413 | cysZ | +0.6 | 3.8 | putative sulfate transport protein CysZ (NCBI) | compare |
| b3741 | gidA | +0.6 | 2.4 | glucose-inhibited division protein A (NCBI) | compare |
| b2318 | truA | +0.6 | 2.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0920 | ycbC | +0.6 | 3.3 | conserved inner membrane protein (NCBI) | compare |
| b3261 | fis | +0.6 | 1.5 | DNA-binding protein Fis (NCBI) | compare |
| b3652 | recG | +0.6 | 4.5 | ATP-dependent DNA helicase (NCBI) | compare |
| b4402 | yjjY | +0.6 | 1.3 | hypothetical protein (NCBI) | compare |
| b0143 | pcnB | +0.6 | 4.0 | poly(A) polymerase I (VIMSS) | compare |
| b1548 | nohA | +0.6 | 2.1 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b2934 | cmtB | +0.6 | 0.7 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0720 | gltA | +0.6 | 4.1 | citrate synthase (NCBI) | compare |
| b2512 | yfgL | +0.6 | 2.9 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0728 | sucC | +0.6 | 3.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2708 | gutQ | +0.6 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b1841 | yobA | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | +0.5 | 2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2083 | yegZ | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1553 | ydfP | +0.5 | 1.8 | Qin prophage; conserved protein (NCBI) | compare |
| b3806 | cyaA | +0.5 | 2.9 | adenylate cyclase (NCBI) | compare |
| b0243 | proA | +0.5 | 4.3 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b3252 | yhdA | +0.5 | 4.6 | conserved inner membrane protein (NCBI) | compare |
| b3500 | gor | +0.5 | 1.2 | glutathione reductase (NCBI) | compare |
| b3398 | yrfF | +0.5 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b4175 | hflC | +0.5 | 4.3 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3863 | polA | +0.5 | 0.5 | DNA polymerase I (NCBI) | compare |
| b4603 | rseX | +0.5 | 0.7 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1536 | ydeI | +0.5 | 0.9 | hypothetical protein (NCBI) | compare |
| b4174 | hflK | +0.5 | 4.4 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1304 | pspA | +0.5 | 2.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b2012 | yeeD | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b2319 | usg | +0.5 | 2.7 | hypothetical protein (NCBI) | compare |
| b1583 | ynfB | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b2904 | gcvH | +0.5 | 1.6 | glycine cleavage system protein H (NCBI) | compare |
| b3133 | agaV | +0.5 | 1.4 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b3164 | pnp | +0.5 | 2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4201 | priB | +0.5 | 1.7 | primosomal replication protein N (NCBI) | compare |
| b4642 | yoeD | +0.5 | 2.0 | no description | compare |