| | gene | name | fitness | t score | description | |
|---|
| b1247 | oppF | +2.0 | 10.9 | oligopeptide transporter subunit (NCBI) | compare |
| b1243 | oppA | +1.8 | 10.5 | oligopeptide transporter subunit (NCBI) | compare |
| b1246 | oppD | +1.7 | 10.4 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b1245 | oppC | +1.7 | 13.2 | oligopeptide transporter subunit (NCBI) | compare |
| b1936 | intG | +1.6 | 2.3 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2469 | narQ | +1.6 | 4.5 | sensory histidine kinase in two-component regulatory system with NarP (NarL) (NCBI) | compare |
| b2684 | mprA | +1.4 | 4.3 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b1244 | oppB | +1.4 | 10.5 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b3911 | cpxA | +1.3 | 10.1 | two-component sensor protein (NCBI) | compare |
| b1765 | ydjA | +1.2 | 1.6 | predicted oxidoreductase (NCBI) | compare |
| b1095 | fabF | +1.1 | 4.2 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b4133 | cadC | +1.0 | 9.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b4593 | ymgI | +0.9 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1524 | yneH | +0.9 | 1.6 | predicted glutaminase (NCBI) | compare |
| b1600 | mdtJ | +0.8 | 2.0 | multidrug efflux system transporter (NCBI) | compare |
| b1823 | cspC | +0.8 | 3.1 | stress protein, member of the CspA-family (NCBI) | compare |
| b2189 | proL | +0.8 | 2.9 | tRNA-Pro (NCBI) | compare |
| b4313 | fimE | +0.8 | 6.7 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1630 | rsxD | +0.8 | 4.4 | electron transport complex protein RnfD (NCBI) | compare |
| b2659 | b2659 | +0.8 | 3.7 | orf, hypothetical protein (VIMSS) | compare |
| b3755 | yieP | +0.8 | 4.7 | predicted transcriptional regulator (NCBI) | compare |
| b3390 | aroK | +0.8 | 2.0 | shikimate kinase I (NCBI) | compare |
| b0464 | acrR | +0.8 | 6.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2502 | ppx | +0.8 | 5.9 | exopolyphosphatase (NCBI) | compare |
| b1628 | rsxB | +0.7 | 3.6 | electron transport complex protein RnfB (NCBI) | compare |
| b3609 | secB | +0.7 | 2.5 | export protein SecB (NCBI) | compare |
| b2078 | baeS | +0.7 | 2.5 | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | compare |
| b4536 | yobH | +0.7 | 3.9 | hypothetical protein (NCBI) | compare |
| b1627 | rsxA | +0.7 | 3.0 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b1629 | rsxC | +0.7 | 4.0 | electron transport complex protein RnfC (NCBI) | compare |
| b1575 | dicB | +0.7 | 1.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1591 | b1591 | +0.7 | 1.5 | putative oxidoreductase component (VIMSS) | compare |
| b1954 | dsrA | +0.7 | 3.1 | regulatory antisense RNA (NCBI) | compare |
| b4590 | ybfK | +0.7 | 0.9 | hypothetical protein (RefSeq) | compare |
| b1001 | yccE | +0.7 | 0.4 | hypothetical protein (NCBI) | compare |
| b4426 | isrA | +0.6 | 2.2 | unknown RNA (NCBI) | compare |
| b2217 | rcsB | +0.6 | 4.3 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b3194 | yrbE | +0.6 | 5.4 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1362 | rzpR | +0.6 | 1.9 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b1497 | b1497 | +0.6 | 0.3 | putative enzyme (VIMSS) | compare |
| b1576 | ydfD | +0.6 | 0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b4679 | yohP | +0.6 | 2.9 | expressed protein (RefSeq) | compare |
| b1279 | yciS | +0.6 | 1.3 | conserved inner membrane protein (NCBI) | compare |
| b2642 | yfjW | +0.6 | 1.1 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1409 | ynbB | +0.6 | 1.0 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b3779 | gpp | +0.6 | 5.6 | guanosine pentaphosphatase/exopolyphosphatase (NCBI) | compare |
| b3429 | glgA | +0.6 | 5.3 | glycogen synthase (NCBI) | compare |
| b3146 | yraL | +0.6 | 4.8 | predicted methyltransferase (NCBI) | compare |
| b4559 | yjdO | +0.6 | 3.0 | hypothetical protein (NCBI) | compare |
| b2450 | yffS | +0.6 | 1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2911 | ssrS | +0.6 | 1.1 | 6S regulatory RNA (NCBI) | compare |
| b2741 | rpoS | +0.6 | 4.5 | RNA polymerase sigma factor (NCBI) | compare |
| b3397 | nudE | +0.6 | 4.9 | ADP-ribose diphosphatase (NCBI) | compare |
| b1607 | ydgC | +0.6 | 1.4 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1545 | pinQ | +0.6 | 0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1347 | ydaC | +0.6 | 0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b4676 | yoaK | +0.6 | 0.6 | expressed protein (RefSeq) | compare |
| b2214 | yojL | +0.6 | 4.3 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b0065 | yabI | +0.6 | 3.6 | conserved inner membrane protein (NCBI) | compare |
| b2363 | yfdT | +0.5 | 1.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1134 | ymfB | +0.5 | 1.8 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1693 | aroD | +0.5 | 2.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1363 | trkG | +0.5 | 0.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b2181 | yejG | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b2061 | wzb | +0.5 | 1.8 | protein-tyrosine phosphatase (NCBI) | compare |
| b1499 | ydeO | +0.5 | 0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1236 | galU | +0.5 | 1.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1357 | ydaS | +0.5 | 1.5 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1773 | ydjI | +0.5 | 1.5 | predicted aldolase (NCBI) | compare |
| b1257 | yciE | +0.5 | 0.2 | hypothetical protein (NCBI) | compare |
| b0661 | miaB | +0.5 | 4.2 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b1334 | fnr | +0.5 | 2.1 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2698 | recX | +0.5 | 2.3 | RecA regulator RecX (NCBI) | compare |
| b1505 | ydeT | +0.5 | 0.9 | hypothetical protein (RefSeq) | compare |
| b1976 | b1976 | +0.5 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1863 | ruvC | +0.5 | 0.5 | Holliday junction resolvase (NCBI) | compare |
| b2960 | yggH | +0.5 | 3.7 | tRNA(m7G46)-methyltransferase (NCBI) | compare |
| b4246 | pyrL | +0.5 | 1.0 | pyrBI operon leader peptide (NCBI) | compare |
| b4570 | lomR | +0.5 | 1.7 | no description | compare |
| b3292 | zntR | +0.5 | 2.3 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b1492 | gadC | +0.5 | 3.3 | predicted glutamate:gamma-aminobutyric acid antiporter (NCBI) | compare |
| b1143 | ymfI | +0.5 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3884 | yihW | +0.5 | 3.1 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b1984 | asnW | +0.5 | 0.9 | tRNA-Asn (NCBI) | compare |
| b1632 | rsxE | +0.5 | 3.2 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b3071 | yqjI | +0.5 | 2.7 | predicted transcriptional regulator (NCBI) | compare |
| b0685 | ybfE | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1167 | ymgC | +0.5 | 0.2 | hypothetical protein (NCBI) | compare |
| b0929 | ompF | +0.5 | 3.1 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b2177 | yejA | +0.5 | 3.5 | orf, hypothetical protein (VIMSS) | compare |
| b4695 | ykgT | +0.5 | 1.8 | no description | compare |
| b4592 | yccB | +0.5 | 1.2 | hypothetical protein (RefSeq) | compare |
| b3495 | uspA | +0.5 | 4.1 | universal stress global response regulator (NCBI) | compare |
| b2180 | yejF | +0.5 | 3.5 | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) | compare |
| b1824 | yobF | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b1400 | paaY | +0.4 | 1.0 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b1540 | ydfH | +0.4 | 1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1848 | yebG | +0.4 | 1.1 | conserved protein regulated by LexA (NCBI) | compare |
| b3753 | rbsR | +0.4 | 3.8 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b4545 | ypdJ | +0.4 | 1.0 | no description | compare |
| b2448 | yffQ | +0.4 | 2.0 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2252 | ais | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b1104 | ycfL | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b2531 | iscR | +0.4 | 1.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0843 | ybjH | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1530 | marR | +0.4 | 1.2 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1325 | ycjG | +0.4 | 1.5 | putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) | compare |
| b0303 | ykgI | +0.4 | 0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0001 | thrL | +0.4 | 2.0 | thr operon leader peptide (NCBI) | compare |
| b1461 | ydcE | +0.4 | 1.7 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b1360 | ydaV | +0.4 | 1.5 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b2637 | yfjT | +0.4 | 1.4 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0802 | ybiJ | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b2945 | endA | +0.4 | 2.8 | DNA-specific endonuclease I (NCBI) | compare |
| b1604 | ydgH | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b1330 | ynaI | +0.4 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b1295 | ymjA | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b3676 | yidH | +0.4 | 2.6 | conserved inner membrane protein (NCBI) | compare |
| b3192 | yrbC | +0.4 | 3.3 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0933 | ssuB | +0.4 | 2.6 | alkanesulfonate transporter subunit (NCBI) | compare |
| b1249 | cls | +0.4 | 2.7 | cardiolipin synthetase (NCBI) | compare |
| b1048 | mdoG | +0.4 | 2.6 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0965 | b0965 | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3191 | yrbB | +0.4 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b2571 | rseB | +0.4 | 3.2 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b1250 | kch | +0.4 | 2.6 | voltage-gated potassium channel (NCBI) | compare |
| b1040 | csgD | +0.4 | 0.8 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b2006 | yeeW | +0.4 | 2.0 | CP4-44 prophage; predicted protein (RefSeq) | compare |
| b4558 | yifL | +0.4 | 2.2 | predicted lipoprotein (NCBI) | compare |
| b0982 | yccY | +0.4 | 2.2 | putative phosphatase (VIMSS) | compare |
| b0535 | fimZ | +0.4 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1790 | yeaM | +0.4 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4345 | mcrC | +0.4 | 0.7 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b1842 | holE | +0.4 | 1.2 | DNA polymerase III, theta subunit (NCBI) | compare |
| b2528 | iscA | +0.4 | 0.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1712 | ihfA | +0.4 | 0.2 | integration host factor subunit alpha (NCBI) | compare |
| b2690 | yqaB | +0.4 | 2.4 | predicted hydrolase (NCBI) | compare |
| b1818 | manY | +0.4 | 1.2 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2229 | b2229 | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0955 | ycbZ | +0.4 | 2.7 | predicted peptidase (NCBI) | compare |
| b2346 | vacJ | +0.4 | 2.8 | predicted lipoprotein (NCBI) | compare |
| b1527 | yneK | +0.4 | 1.0 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b4699 | fnrS | +0.4 | 0.5 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3816 | corA | +0.4 | 2.8 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b4181 | yjfI | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b3206 | npr | +0.4 | 2.3 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1306 | pspC | +0.4 | 1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b0660 | ybeZ | +0.4 | 2.3 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b0104 | guaC | +0.4 | 2.8 | guanosine 5'-monophosphate oxidoreductase (NCBI) | compare |
| b1150 | ymfR | +0.4 | 0.6 | e14 prophage; predicted protein (NCBI) | compare |
| b4222 | ytfP | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b2179 | yejE | +0.4 | 2.3 | predicted oligopeptide transporter subunit (NCBI) | compare |
| b3014 | yqhH | +0.4 | 1.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1895 | yecG | +0.4 | 2.2 | universal stress protein (NCBI) | compare |
| b1548 | nohA | +0.4 | 1.1 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b2058 | wcaB | +0.4 | 0.7 | predicted acyl transferase (NCBI) | compare |
| b4383 | deoB | +0.3 | 2.8 | phosphopentomutase (NCBI) | compare |
| b3054 | ygiF | +0.3 | 2.6 | predicted adenylate cyclase (NCBI) | compare |
| b1049 | mdoH | +0.3 | 2.7 | glucosyltransferase MdoH (NCBI) | compare |
| b3812 | yigB | +0.3 | 2.4 | predicted hydrolase (NCBI) | compare |
| b2055 | wcaE | +0.3 | 0.2 | predicted glycosyl transferase (NCBI) | compare |
| b0617 | citD | +0.3 | 1.2 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b2792 | yqcC | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b1165 | ymgA | +0.3 | 0.3 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | +0.3 | 0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1324 | tpx | +0.3 | 1.1 | thiol peroxidase (NCBI) | compare |
| b0759 | galE | +0.3 | 2.3 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b4523 | yciX | +0.3 | 1.7 | hypothetical protein (RefSeq) | compare |
| b1919 | yedO | +0.3 | 1.0 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1735 | chbR | +0.3 | 1.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1690 | ydiM | +0.3 | 0.9 | predicted transporter (NCBI) | compare |
| b3684 | yidP | +0.3 | 2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0717 | ybgP | +0.3 | 1.8 | predicted assembly protein (NCBI) | compare |
| b1013 | ycdC | +0.3 | 1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4511 | ybdZ | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b0865 | ybjP | +0.3 | 1.7 | predicted lipoprotein (NCBI) | compare |
| b0377 | sbmA | +0.3 | 2.8 | predicted transporter (NCBI) | compare |
| b3195 | yrbF | +0.3 | 2.6 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0696 | kdpC | +0.3 | 1.5 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b4032 | malG | +0.3 | 2.5 | maltose transporter subunit (NCBI) | compare |
| b2081 | yegQ | +0.3 | 2.4 | predicted peptidase (NCBI) | compare |
| b0279 | yagM | +0.3 | 0.2 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2136 | yohD | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4522 | yciX_1 | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b0828 | iaaA | +0.3 | 1.3 | L-asparaginase (NCBI) | compare |
| b4458 | oxyS | +0.3 | 0.9 | global regulatory RNA (NCBI) | compare |
| b1741 | ydjQ | +0.3 | 1.8 | endonuclease of nucleotide excision repair (NCBI) | compare |
| b1111 | ycfQ | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2618 | b2618 | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1733 | chbG | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b4453 | ldrD | +0.3 | 1.2 | toxic polypeptide, small (NCBI) | compare |
| b3193 | yrbD | +0.3 | 2.5 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b1021 | ycdP | +0.3 | 1.9 | predicted inner membrane protein (NCBI) | compare |
| b2204 | napH | +0.3 | 1.3 | quinol dehydrogenase membrane component (NCBI) | compare |
| b1503 | ydeR | +0.3 | 1.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1951 | rcsA | +0.3 | 0.6 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0643 | ybeL | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b1029 | ycdU | +0.3 | 2.0 | predicted inner membrane protein (NCBI) | compare |
| b3443 | yrhA | +0.3 | 0.6 | orf, hypothetical protein (VIMSS) | compare |