| | gene | name | fitness | t score | description | |
|---|
| b2808 | gcvA | -4.2 | -4.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3860 | dsbA | -3.5 | -7.1 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4242 | mgtA | -3.3 | -2.2 | magnesium transporter (NCBI) | compare |
| b1185 | dsbB | -2.9 | -4.6 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0683 | fur | -2.8 | -1.8 | ferric uptake regulator (NCBI) | compare |
| b4702 | mgtL | -2.8 | -1.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0222 | lpcA | -2.8 | -1.9 | phosphoheptose isomerase (NCBI) | compare |
| b3844 | fre | -2.6 | -10.0 | NAD(P)H-flavin reductase (NCBI) | compare |
| b4171 | miaA | -2.6 | -4.2 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1855 | lpxM | -2.6 | -6.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2017 | yefM | -2.5 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2318 | truA | -2.5 | -4.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2312 | purF | -2.3 | -8.1 | amidophosphoribosyltransferase (NCBI) | compare |
| b0439 | lon | -2.1 | -3.5 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0438 | clpX | -2.1 | -2.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1235 | rssB | -2.0 | -6.9 | response regulator of RpoS (NCBI) | compare |
| b3916 | pfkA | -2.0 | -3.7 | 6-phosphofructokinase (NCBI) | compare |
| b4005 | purD | -2.0 | -11.1 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b3052 | rfaE | -2.0 | -2.9 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1438 | ydcQ | -2.0 | -3.0 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0080 | fruR | -2.0 | -7.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3493 | pitA | -1.9 | -8.2 | phosphate transporter, low-affinity (NCBI) | compare |
| b3979 | thrT | -1.9 | -0.7 | tRNA-Thr (NCBI) | compare |
| b2620 | smpB | -1.8 | -1.7 | SsrA-binding protein (NCBI) | compare |
| b0145 | dksA | -1.8 | -3.5 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0632 | dacA | -1.7 | -9.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b4375 | prfC | -1.7 | -6.8 | peptide chain release factor 3 (NCBI) | compare |
| b2330 | yfcB | -1.7 | -3.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3183 | obgE | -1.7 | -2.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4006 | purH | -1.7 | -10.7 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b1292 | sapC | -1.7 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2414 | cysK | -1.6 | -9.9 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b0726 | sucA | -1.6 | -5.9 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0437 | clpP | -1.6 | -1.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3162 | deaD | -1.6 | -5.9 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2501 | ppk | -1.6 | -10.2 | polyphosphate kinase (NCBI) | compare |
| b0049 | apaH | -1.5 | -1.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b4203 | rplI | -1.5 | -7.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b0522 | purK | -1.5 | -7.5 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3164 | pnp | -1.5 | -3.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3870 | glnA | -1.5 | -3.5 | glutamine synthetase (NCBI) | compare |
| b3838 | tatB | -1.4 | -6.6 | sec-independent translocase (NCBI) | compare |
| b0400 | phoR | -1.4 | -10.2 | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | compare |
| b3849 | trkH | -1.4 | -10.1 | potassium transporter (NCBI) | compare |
| b1850 | eda | -1.4 | -2.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0200 | gmhB | -1.4 | -0.9 | hypothetical protein (NCBI) | compare |
| b3630 | rfaP | -1.4 | -5.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3621 | rfaC | -1.4 | -1.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3204 | ptsN | -1.3 | -5.3 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2329 | aroC | -1.3 | -5.2 | chorismate synthase (NCBI) | compare |
| b2279 | nuoK | -1.3 | -2.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0226 | dinJ | -1.3 | -3.9 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2512 | yfgL | -1.3 | -5.2 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0688 | pgm | -1.3 | -3.2 | phosphoglucomutase (NCBI) | compare |
| b3620 | rfaF | -1.3 | -2.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1291 | sapD | -1.3 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3792 | wzxE | -1.3 | -2.2 | O-antigen translocase (NCBI) | compare |
| b4180 | rlmB | -1.3 | -8.1 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b3631 | rfaG | -1.2 | -7.7 | glucosyltransferase I (NCBI) | compare |
| b4654 | yjdQ | -1.2 | -4.2 | no description | compare |
| b0051 | ksgA | -1.2 | -4.4 | dimethyladenosine transferase (NCBI) | compare |
| b3867 | hemN | -1.2 | -8.8 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b2784 | relA | -1.2 | -8.8 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0908 | aroA | -1.2 | -6.8 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1084 | rne | -1.1 | -3.8 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1290 | sapF | -1.1 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4202 | rpsR | -1.1 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2421 | cysM | -1.1 | -4.2 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b0630 | lipB | -1.1 | -1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3842 | rfaH | -1.1 | -3.4 | transcriptional activator RfaH (NCBI) | compare |
| b4481 | rffT | -1.1 | -3.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4175 | hflC | -1.1 | -7.2 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b2313 | cvpA | -1.1 | -2.2 | membrane protein required for colicin V production (NCBI) | compare |
| b3414 | gntY | -1.0 | -5.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b4676 | yoaK | -1.0 | -0.8 | expressed protein (RefSeq) | compare |
| b1332 | ynaJ | -1.0 | -1.1 | predicted inner membrane protein (NCBI) | compare |
| b2569 | lepA | -1.0 | -3.5 | GTP-binding protein LepA (NCBI) | compare |
| b0386 | proC | -1.0 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1176 | minC | -1.0 | -1.9 | septum formation inhibitor (NCBI) | compare |
| b2280 | nuoJ | -1.0 | -4.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3387 | dam | -1.0 | -5.0 | DNA adenine methylase (NCBI) | compare |
| b2278 | nuoL | -1.0 | -6.4 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2935 | tktA | -1.0 | -1.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4179 | vacB | -1.0 | -4.0 | putative enzyme (VIMSS) | compare |
| b0912 | ihfB | -1.0 | -0.6 | integration host factor subunit beta (NCBI) | compare |
| b2277 | nuoM | -1.0 | -5.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0928 | aspC | -1.0 | -5.6 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b2175 | spr | -1.0 | -2.8 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3791 | rffA | -1.0 | -3.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1107 | nagZ | -1.0 | -4.1 | beta-hexosaminidase (NCBI) | compare |
| b3236 | mdh | -1.0 | -5.5 | malate dehydrogenase (NCBI) | compare |
| b1982 | amn | -0.9 | -6.8 | AMP nucleosidase (NCBI) | compare |
| b2283 | nuoG | -0.9 | -5.7 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2284 | nuoF | -0.9 | -4.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3642 | pyrE | -0.9 | -1.8 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0767 | ybhE | -0.9 | -2.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b4174 | hflK | -0.9 | -5.9 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1192 | ldcA | -0.9 | -2.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b1346 | ydaQ | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3806 | cyaA | -0.9 | -3.8 | adenylate cyclase (NCBI) | compare |
| b2276 | nuoN | -0.9 | -3.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4025 | pgi | -0.9 | -5.8 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2553 | glnB | -0.9 | -5.1 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0564 | appY | -0.9 | -0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3787 | rffD | -0.8 | -5.3 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4146 | yjeK | -0.8 | -1.8 | predicted lysine aminomutase (NCBI) | compare |
| b1613 | manA | -0.8 | -1.8 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3977 | tyrU | -0.8 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b3741 | gidA | -0.8 | -1.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3545 | proK | -0.8 | -2.2 | tRNA-Pro (NCBI) | compare |
| b1551 | b1551 | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b2282 | nuoH | -0.8 | -2.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2340 | sixA | -0.8 | -3.2 | phosphohistidine phosphatase (NCBI) | compare |
| b0889 | lrp | -0.8 | -1.8 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b3786 | rffE | -0.8 | -5.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1025 | ycdT | -0.8 | -1.8 | predicted diguanylate cyclase (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.8 | exoribonuclease II (NCBI) | compare |
| b4458 | oxyS | -0.8 | -1.5 | global regulatory RNA (NCBI) | compare |
| b2617 | smpA | -0.8 | -3.0 | small membrane protein A (VIMSS) | compare |
| b2281 | nuoI | -0.8 | -2.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0722 | sdhD | -0.8 | -3.4 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0142 | folK | -0.8 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2683 | ygaH | -0.8 | -2.9 | predicted inner membrane protein (NCBI) | compare |
| b3935 | priA | -0.8 | -2.6 | primosome assembly protein PriA (NCBI) | compare |
| b3778 | rep | -0.8 | -4.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b0926 | ycbK | -0.8 | -3.8 | hypothetical protein (NCBI) | compare |
| b2286 | nuoC | -0.8 | -3.4 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b4201 | priB | -0.8 | -2.5 | primosomal replication protein N (NCBI) | compare |
| b4414 | tff | -0.8 | -1.3 | unknown RNA (NCBI) | compare |
| b1236 | galU | -0.8 | -1.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2906 | visC | -0.8 | -4.7 | hypothetical protein (NCBI) | compare |
| b0723 | sdhA | -0.8 | -6.3 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b4245 | pyrB | -0.7 | -2.1 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b0113 | pdhR | -0.7 | -4.3 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b4041 | plsB | -0.7 | -1.7 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b3237 | argR | -0.7 | -2.8 | arginine repressor (NCBI) | compare |
| b3706 | trmE | -0.7 | -1.9 | tRNA modification GTPase (NCBI) | compare |
| b3205 | yhbJ | -0.7 | -3.1 | hypothetical protein (NCBI) | compare |
| b4647 | mokA | -0.7 | -0.8 | no description | compare |
| b1961 | dcm | -0.7 | -1.9 | DNA cytosine methylase (NCBI) | compare |
| b1231 | tyrT | -0.7 | -1.0 | tRNA-Tyr (NCBI) | compare |
| b0550 | rusA | -0.7 | -2.5 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b3601 | mtlR | -0.7 | -4.4 | DNA-binding repressor (NCBI) | compare |
| b1418 | cybB | -0.7 | -3.6 | cytochrome b(561) (VIMSS) | compare |
| b2188 | yejM | -0.7 | -4.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3627 | rfaI | -0.7 | -5.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1676 | pykF | -0.7 | -3.8 | pyruvate kinase (NCBI) | compare |
| b4484 | cpxP | -0.7 | -3.4 | periplasmic protein combats stress (NCBI) | compare |
| b0783 | moaC | -0.7 | -3.5 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b3965 | trmA | -0.7 | -6.0 | tRNA (uracil-5-)-methyltransferase (NCBI) | compare |
| b0677 | nagA | -0.7 | -3.8 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4139 | aspA | -0.7 | -5.3 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2557 | purL | -0.7 | -4.9 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0053 | surA | -0.7 | -0.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0764 | modB | -0.7 | -3.8 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1412 | azoR | -0.7 | -2.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b2905 | gcvT | -0.7 | -4.2 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b3764 | yifE | -0.7 | -3.5 | hypothetical protein (NCBI) | compare |
| b2912 | ygfA | -0.7 | -1.4 | putative ligase (VIMSS) | compare |
| b4388 | serB | -0.7 | -4.8 | 3-phosphoserine phosphatase (NCBI) | compare |
| b0143 | pcnB | -0.7 | -3.5 | poly(A) polymerase I (VIMSS) | compare |
| b4698 | mgrR | -0.7 | -3.0 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b3247 | cafA | -0.7 | -5.2 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b0209 | yafD | -0.7 | -3.3 | hypothetical protein (NCBI) | compare |
| b2669 | stpA | -0.7 | -5.5 | DNA binding protein, nucleoid-associated (NCBI) | compare |
| b4000 | hupA | -0.7 | -4.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1951 | rcsA | -0.7 | -1.2 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.6 | nucleoside diphosphate kinase (NCBI) | compare |
| b0548 | ninE | -0.6 | -2.7 | DLP12 prophage; conserved protein (NCBI) | compare |
| b3652 | recG | -0.6 | -4.6 | ATP-dependent DNA helicase (NCBI) | compare |
| b4675 | yoaJ | -0.6 | -2.1 | expressed protein (RefSeq) | compare |
| b3794 | rffM | -0.6 | -3.1 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3930 | menA | -0.6 | -5.7 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3398 | yrfF | -0.6 | -1.9 | predicted inner membrane protein (NCBI) | compare |
| b2493 | yfgO | -0.6 | -4.7 | predicted inner membrane protein (NCBI) | compare |
| b4593 | ymgI | -0.6 | -0.7 | hypothetical protein (RefSeq) | compare |
| b0948 | ycbY | -0.6 | -4.3 | predicted methyltransferase (NCBI) | compare |
| b1865 | nudB | -0.6 | -0.7 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0882 | clpA | -0.6 | -5.0 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | compare |
| b1293 | sapB | -0.6 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3911 | cpxA | -0.6 | -3.2 | two-component sensor protein (NCBI) | compare |
| b4243 | yjgF | -0.6 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b2498 | upp | -0.6 | -1.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0693 | speF | -0.6 | -4.2 | ornithine decarboxylase isozyme, inducible (NCBI) | compare |
| b0724 | sdhB | -0.6 | -3.5 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2168 | fruK | -0.6 | -0.6 | 1-phosphofructokinase (NCBI) | compare |
| b3781 | trxA | -0.6 | -3.1 | thioredoxin 1 (VIMSS) | compare |
| b1863 | ruvC | -0.6 | -0.4 | Holliday junction resolvase (NCBI) | compare |
| b0032 | carA | -0.6 | -2.3 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b3869 | glnL | -0.6 | -3.1 | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | compare |
| b3281 | aroE | -0.6 | -4.8 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0706 | ybfD | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b3494 | yhiO | -0.6 | -3.6 | universal stress protein UspB (NCBI) | compare |
| b2904 | gcvH | -0.6 | -1.8 | glycine cleavage system protein H (NCBI) | compare |
| b2516 | yfgA | -0.6 | -3.5 | hypothetical protein (NCBI) | compare |
| b4390 | nadR | -0.6 | -4.6 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b3628 | rfaB | -0.6 | -4.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b4547 | ypfN | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| b3389 | aroB | -0.6 | -3.9 | 3-dehydroquinate synthase (NCBI) | compare |
| b3289 | rsmB | -0.6 | -4.9 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |