| | gene | name | fitness | t score | description | |
|---|
| b1243 | oppA | +3.4 | 15.1 | oligopeptide transporter subunit (NCBI) | compare |
| b1246 | oppD | +3.4 | 14.8 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b1245 | oppC | +3.1 | 15.5 | oligopeptide transporter subunit (NCBI) | compare |
| b1247 | oppF | +3.1 | 12.6 | oligopeptide transporter subunit (NCBI) | compare |
| b1244 | oppB | +3.1 | 16.1 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b2684 | mprA | +3.0 | 6.5 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b2469 | narQ | +2.8 | 5.3 | sensory histidine kinase in two-component regulatory system with NarP (NarL) (NCBI) | compare |
| b1095 | fabF | +2.4 | 8.6 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3911 | cpxA | +2.4 | 14.2 | two-component sensor protein (NCBI) | compare |
| b1530 | marR | +1.7 | 2.2 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0464 | acrR | +1.5 | 9.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1831 | proQ | +1.4 | 5.1 | putative solute/DNA competence effector (NCBI) | compare |
| b1627 | rsxA | +1.3 | 6.5 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b1048 | mdoG | +1.2 | 7.6 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b2078 | baeS | +1.2 | 2.7 | sensory histidine kinase in two-component regulatory system with BaeR (NCBI) | compare |
| b1936 | intG | +1.1 | 1.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1693 | aroD | +1.1 | 5.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3390 | aroK | +1.1 | 2.8 | shikimate kinase I (NCBI) | compare |
| b1049 | mdoH | +1.1 | 8.4 | glucosyltransferase MdoH (NCBI) | compare |
| b4313 | fimE | +1.0 | 8.6 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4133 | cadC | +1.0 | 9.2 | DNA-binding transcriptional activator (NCBI) | compare |
| b1765 | ydjA | +1.0 | 1.4 | predicted oxidoreductase (NCBI) | compare |
| b4590 | ybfK | +1.0 | 1.5 | hypothetical protein (RefSeq) | compare |
| b1628 | rsxB | +1.0 | 4.3 | electron transport complex protein RnfB (NCBI) | compare |
| b3281 | aroE | +1.0 | 7.2 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b2189 | proL | +0.9 | 3.5 | tRNA-Pro (NCBI) | compare |
| b2179 | yejE | +0.9 | 5.5 | predicted oligopeptide transporter subunit (NCBI) | compare |
| b3609 | secB | +0.9 | 2.8 | export protein SecB (NCBI) | compare |
| b1361 | ydaW | +0.9 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3027 | ygiZ | +0.9 | 0.8 | conserved inner membrane protein (NCBI) | compare |
| b3755 | yieP | +0.8 | 4.7 | predicted transcriptional regulator (NCBI) | compare |
| b3002 | yqhA | +0.8 | 3.4 | hypothetical protein (NCBI) | compare |
| b1630 | rsxD | +0.8 | 4.9 | electron transport complex protein RnfD (NCBI) | compare |
| b4585 | sroB | +0.8 | 1.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b2502 | ppx | +0.8 | 6.0 | exopolyphosphatase (NCBI) | compare |
| b1848 | yebG | +0.8 | 2.2 | conserved protein regulated by LexA (NCBI) | compare |
| b4383 | deoB | +0.8 | 5.8 | phosphopentomutase (NCBI) | compare |
| b2178 | yejB | +0.8 | 4.9 | predicted oligopeptide transporter subunit (NCBI) | compare |
| b2945 | endA | +0.8 | 4.4 | DNA-specific endonuclease I (NCBI) | compare |
| b1257 | yciE | +0.8 | 0.4 | hypothetical protein (NCBI) | compare |
| b0929 | ompF | +0.7 | 5.1 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b2180 | yejF | +0.7 | 5.4 | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) | compare |
| b4041 | plsB | +0.7 | 2.5 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1709 | btuD | +0.7 | 1.3 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1632 | rsxE | +0.7 | 5.1 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1236 | galU | +0.7 | 2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3146 | yraL | +0.7 | 5.7 | predicted methyltransferase (NCBI) | compare |
| b1090 | plsX | +0.7 | 2.4 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b4603 | rseX | +0.7 | 0.8 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4402 | yjjY | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b2741 | rpoS | +0.7 | 4.5 | RNA polymerase sigma factor (NCBI) | compare |
| b2177 | yejA | +0.7 | 5.0 | orf, hypothetical protein (VIMSS) | compare |
| b2659 | b2659 | +0.7 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2346 | vacJ | +0.6 | 4.8 | predicted lipoprotein (NCBI) | compare |
| b3397 | nudE | +0.6 | 5.4 | ADP-ribose diphosphatase (NCBI) | compare |
| b3779 | gpp | +0.6 | 5.6 | guanosine pentaphosphatase/exopolyphosphatase (NCBI) | compare |
| b1346 | ydaQ | +0.6 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1557 | cspB | +0.6 | 2.2 | Qin prophage; cold shock protein (NCBI) | compare |
| b3673 | emrD | +0.6 | 5.3 | 2-module integral membrane pump; multidrug resistance (VIMSS) | compare |
| b1382 | ynbE | +0.6 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b3429 | glgA | +0.6 | 5.2 | glycogen synthase (NCBI) | compare |
| b2181 | yejG | +0.6 | 2.5 | hypothetical protein (NCBI) | compare |
| b3193 | yrbD | +0.6 | 4.6 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b3192 | yrbC | +0.6 | 4.8 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0696 | kdpC | +0.6 | 3.1 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b4426 | isrA | +0.6 | 2.0 | unknown RNA (NCBI) | compare |
| b1600 | mdtJ | +0.6 | 1.3 | multidrug efflux system transporter (NCBI) | compare |
| b1205 | ychH | +0.6 | 1.9 | predicted inner membrane protein (NCBI) | compare |
| b0730 | mngR | +0.6 | 1.2 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4381 | deoC | +0.6 | 2.5 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b1363 | trkG | +0.6 | 0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4647 | mokA | +0.6 | 0.9 | no description | compare |
| b0759 | galE | +0.6 | 3.8 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b1524 | yneH | +0.5 | 1.0 | predicted glutaminase (NCBI) | compare |
| b1400 | paaY | +0.5 | 1.4 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b2214 | yojL | +0.5 | 4.1 | predicted thiamine biosynthesis lipoprotein (NCBI) | compare |
| b1111 | ycfQ | +0.5 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3133 | agaV | +0.5 | 1.5 | PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA) (VIMSS) | compare |
| b1505 | ydeT | +0.5 | 1.1 | hypothetical protein (RefSeq) | compare |
| b1690 | ydiM | +0.5 | 1.7 | predicted transporter (NCBI) | compare |
| b1642 | slyA | +0.5 | 2.1 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1607 | ydgC | +0.5 | 1.5 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b3500 | gor | +0.5 | 1.3 | glutathione reductase (NCBI) | compare |
| b1058 | yceO | +0.5 | 0.3 | hypothetical protein (NCBI) | compare |
| b3229 | sspA | +0.5 | 2.3 | stringent starvation protein A (NCBI) | compare |
| b1573 | ydfC | +0.5 | 1.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b4246 | pyrL | +0.5 | 1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b0661 | miaB | +0.5 | 4.2 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b4536 | yobH | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b1629 | rsxC | +0.5 | 3.7 | electron transport complex protein RnfC (NCBI) | compare |
| b3495 | uspA | +0.5 | 4.3 | universal stress global response regulator (NCBI) | compare |
| b1502 | ydeQ | +0.5 | 1.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3403 | pck | +0.5 | 3.9 | phosphoenolpyruvate carboxykinase (NCBI) | compare |
| b4618 | tisB | +0.5 | 3.0 | lexA-regulated toxic peptide (RefSeq) | compare |
| b4214 | cysQ | +0.5 | 3.8 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b0945 | pyrD | +0.5 | 2.2 | dihydroorotate dehydrogenase (NCBI) | compare |
| b2531 | iscR | +0.5 | 1.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1954 | dsrA | +0.5 | 2.1 | regulatory antisense RNA (NCBI) | compare |
| b2960 | yggH | +0.5 | 3.0 | tRNA(m7G46)-methyltransferase (NCBI) | compare |
| b4557 | yidD | +0.5 | 2.0 | hypothetical protein (NCBI) | compare |
| b1284 | yciT | +0.5 | 2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1735 | chbR | +0.5 | 2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1576 | ydfD | +0.5 | 0.2 | Qin prophage; predicted protein (NCBI) | compare |
| b0989 | cspH | +0.5 | 1.5 | stress protein, member of the CspA-family (NCBI) | compare |
| b1497 | b1497 | +0.5 | 0.2 | putative enzyme (VIMSS) | compare |
| b2258 | b2258 | +0.5 | 1.1 | putative transport/receptor protein (VIMSS) | compare |
| b3195 | yrbF | +0.5 | 3.9 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1606 | folM | +0.5 | 2.9 | short chain dehydrogenase (NCBI) | compare |
| b3790 | rffC | +0.5 | 1.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3389 | aroB | +0.4 | 3.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b2217 | rcsB | +0.4 | 3.2 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b1818 | manY | +0.4 | 1.7 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1088 | yceD | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b4595 | yciY | +0.4 | 1.5 | hypothetical protein (RefSeq) | compare |
| b0065 | yabI | +0.4 | 2.4 | conserved inner membrane protein (NCBI) | compare |
| b3009 | yghB | +0.4 | 3.3 | conserved inner membrane protein (NCBI) | compare |
| b2911 | ssrS | +0.4 | 1.0 | 6S regulatory RNA (NCBI) | compare |
| b1194 | ycgR | +0.4 | 2.0 | protein involved in flagellar function (NCBI) | compare |
| b1347 | ydaC | +0.4 | 0.2 | Rac prophage; predicted protein (NCBI) | compare |
| b1366 | ydaY | +0.4 | 1.9 | Rac prophage; predicted protein (RefSeq) | compare |
| b2570 | rseC | +0.4 | 3.2 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b2859 | ygeO | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b1824 | yobF | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b1156 | tfaE | +0.4 | 2.2 | e14 prophage; predicted tail fiber assembly protein (NCBI) | compare |
| b0527 | ybcI | +0.4 | 2.1 | conserved inner membrane protein (NCBI) | compare |
| b1591 | b1591 | +0.4 | 1.4 | putative oxidoreductase component (VIMSS) | compare |
| b2846 | yqeH | +0.4 | 0.4 | orf, hypothetical protein (VIMSS) | compare |
| b4598 | yncL | +0.4 | 1.4 | hypothetical protein (RefSeq) | compare |
| b0707 | ybgA | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b0953 | rmf | +0.4 | 1.4 | ribosome modulation factor (NCBI) | compare |
| b2579 | yfiD | +0.4 | 1.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b1919 | yedO | +0.4 | 1.8 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1258 | yciF | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b1583 | ynfB | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b1492 | gadC | +0.4 | 2.7 | predicted glutamate:gamma-aminobutyric acid antiporter (NCBI) | compare |
| b3191 | yrbB | +0.4 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b0412 | yajI | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1545 | pinQ | +0.4 | 0.1 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1253 | yciA | +0.4 | 1.3 | predicted hydrolase (NCBI) | compare |
| b2136 | yohD | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1691 | ydiN | +0.4 | 1.9 | predicted transporter (RefSeq) | compare |
| b2300 | yfcE | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4387 | ytjB | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1242 | ychE | +0.4 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b4592 | yccB | +0.4 | 1.5 | hypothetical protein (RefSeq) | compare |
| b2204 | napH | +0.4 | 2.2 | quinol dehydrogenase membrane component (NCBI) | compare |
| b2252 | ais | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b3432 | glgB | +0.4 | 3.2 | glycogen branching enzyme (NCBI) | compare |
| b4438 | cyaR | +0.4 | 1.8 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1821 | b1821 | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2998 | yghW | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1900 | araG | +0.4 | 1.8 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0377 | sbmA | +0.4 | 3.0 | predicted transporter (NCBI) | compare |
| b1648 | b1648 | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3753 | rbsR | +0.4 | 3.1 | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | compare |
| b0974 | hyaC | +0.4 | 1.2 | hydrogenase 1, b-type cytochrome subunit (NCBI) | compare |
| b2734 | pphB | +0.3 | 1.9 | serine/threonine-specific protein phosphatase 2 (NCBI) | compare |
| b2319 | usg | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b1180 | ycgM | +0.3 | 1.6 | predicted isomerase/hydrolase (NCBI) | compare |
| b2690 | yqaB | +0.3 | 2.4 | predicted hydrolase (NCBI) | compare |
| b0279 | yagM | +0.3 | 0.2 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2066 | udk | +0.3 | 2.1 | uridine/cytidine kinase (VIMSS) | compare |
| b1134 | ymfB | +0.3 | 1.4 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b3206 | npr | +0.3 | 2.3 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4045 | yjbJ | +0.3 | 1.5 | predicted stress response protein (NCBI) | compare |
| b3912 | cpxR | +0.3 | 2.7 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b3766 | ilvL | +0.3 | 1.3 | ilvG operon leader peptide (NCBI) | compare |
| b2343 | b2343 | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1167 | ymgC | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b3138 | agaB | +0.3 | 1.5 | N-acetylgalactosamine-specific enzyme IIB component of PTS (NCBI) | compare |
| b0706 | ybfD | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1067 | yceH | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1182 | hlyE | +0.3 | 0.3 | hemolysin E (VIMSS) | compare |
| b2642 | yfjW | +0.3 | 0.5 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0982 | yccY | +0.3 | 2.1 | putative phosphatase (VIMSS) | compare |
| b1689 | b1689 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3816 | corA | +0.3 | 2.8 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b1951 | rcsA | +0.3 | 0.8 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b2445 | yffN | +0.3 | 2.0 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b0998 | torD | +0.3 | 0.7 | chaperone protein TorD (NCBI) | compare |
| b4409 | blr | +0.3 | 2.4 | beta-lactam resistance membrane protein (NCBI) | compare |
| b1499 | ydeO | +0.3 | 0.2 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1141 | ymfG | +0.3 | 1.8 | e14 prophage; predicted excisionase (NCBI) | compare |
| b4684 | yqfG | +0.3 | 2.3 | expressed protein (RefSeq) | compare |
| b2266 | elaB | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b3933 | ftsN | +0.3 | 2.7 | essential cell division protein (NCBI) | compare |
| b1108 | ycfP | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0645 | ybeR | +0.3 | 2.3 | hypothetical protein (NCBI) | compare |
| b1536 | ydeI | +0.3 | 0.4 | hypothetical protein (NCBI) | compare |
| b1823 | cspC | +0.3 | 1.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b1742 | b1742 | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0300 | ykgA | +0.3 | 1.5 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b0937 | ssuE | +0.3 | 1.1 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b2157 | yeiE | +0.3 | 2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0310 | ykgH | +0.3 | 0.7 | predicted inner membrane protein (NCBI) | compare |
| b4407 | thiS | +0.3 | 1.0 | sulfur carrier protein ThiS (NCBI) | compare |
| b0909 | ycaL | +0.3 | 2.1 | putative heat shock protein (VIMSS) | compare |
| b1960 | vsr | +0.3 | 1.1 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b1669 | ydhT | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0660 | ybeZ | +0.3 | 1.7 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |