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Experiment set53IT014 for
Escherichia coli BW25113
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M9 with Methotrexate 1.98 mM 24 hr
Genes with
specific
phenotypes:
gene
name
fitness
t score
description
b2742
nlpD
-3.1
-12.6
predicted outer membrane lipoprotein (NCBI)
compare
b2686
emrB
-2.9
-13.4
multidrug efflux system protein (NCBI)
compare
b3527
yhjJ
-2.8
-21.5
predicted zinc-dependent peptidase (NCBI)
compare
b2685
emrA
-2.6
-12.5
multidrug efflux system (NCBI)
compare
b4472
yhdP
-2.4
-19.7
conserved membrane protein, predicted transporter (NCBI)
compare
b3920
yiiQ
-2.2
-12.0
hypothetical protein (NCBI)
compare
b3150
yraP
-2.2
-7.9
hypothetical protein (NCBI)
compare
b1856
yebA
-2.0
-8.3
orf, hypothetical protein (VIMSS)
compare
b3054
ygiF
-1.3
-8.1
predicted adenylate cyclase (NCBI)
compare
b2817
b2817
-1.3
-6.6
putative amidase (VIMSS)
compare
b2470
acrD
-1.0
-7.4
aminoglycoside/multidrug efflux system (NCBI)
compare
b0925
ycbB
+1.0
8.2
predicted carboxypeptidase (NCBI)
compare
b3723
bglG
+1.1
5.3
transcriptional antiterminator of the bgl operon (NCBI)
compare
b1284
yciT
+1.4
7.2
predicted DNA-binding transcriptional regulator (NCBI)
compare
b4030
yjbA
+1.4
9.0
phosphate-starvation-inducible protein PsiE (NCBI)
compare
b2480
bcp
+1.5
9.3
thioredoxin-dependent thiol peroxidase (NCBI)
compare
b4253
yjgL
+1.5
6.3
orf, hypothetical protein (VIMSS)
compare
b2303
folX
+2.8
20.8
D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase (NCBI)
compare
b1606
folM
+2.9
22.4
short chain dehydrogenase (NCBI)
compare
b2469
narQ
+3.5
6.3
sensory histidine kinase in two-component regulatory system with NarP (NarL) (NCBI)
compare
b2078
baeS
+4.6
16.2
sensory histidine kinase in two-component regulatory system with BaeR (NCBI)
compare
b1245
oppC
+9.9
77.0
oligopeptide transporter subunit (NCBI)
compare
b1247
oppF
+10.0
73.5
oligopeptide transporter subunit (NCBI)
compare
b1246
oppD
+10.0
89.3
oligopeptide transporter ATP-binding component (NCBI)
compare
b1244
oppB
+10.1
52.3
oligopeptide permease ABC transporter membrane protein (NCBI)
compare
b1243
oppA
+10.3
73.4
oligopeptide transporter subunit (NCBI)
compare
Specific phenotypes for stress Methotrexate across organisms