Experiment set52S622 for Pseudomonas putida KT2440

Compare to:

Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1460 -5.7 -7.8 putative Membrane protein compare
PP_0902 -3.6 -9.1 integral membrane sensor signal transduction histidine kinase compare
PP_0901 -3.3 -7.9 DNA-binding response regulator compare
PP_0413 -3.2 -13.6 Polyamine ABC transporter, permease protein conserved
PP_1430 -3.2 -9.9 putative periplasmic serine endoprotease DegP-like compare
PP_1202 -2.7 -12.8 putative enzyme involved in modification of phospholipids conserved
PP_1695 -2.5 -9.3 putative Sodium-solute symporter/sensory box histidine kinase/response regulator compare
PP_1201 -2.3 -5.2 conserved exported protein of unknown function compare
PP_4651 -2.3 -6.9 Ubiquinol oxidase subunit I, cyanide insensitive compare
PP_2711 -2.3 -5.9 Oxidoreductase, short-chain dehydrogenase/reductase family compare
PP_0310 -1.8 -10.0 putative dimethylglycine dehydrogenase subunit compare
PP_3300 -1.8 -6.6 Transcriptional regulator, tetR family compare
PP_0058 -1.5 -7.6 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PP_2679 +1.0 5.1 quinoprotein ethanol dehydrogenase compare
PP_5470 +1.2 7.1 conserved protein of unknown function compare
PP_2666 +2.4 5.5 conserved exported protein of unknown function compare
PP_2683 +3.8 13.0 putative sensory box histidine kinase/response regulator compare


Specific phenotypes for in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days across organisms